Information report for AT3G27710
Gene Details
|
|
Functional Descriptions
Functional Keywords
Literature and News
- Evaluation and classification of RING-finger domains encoded by the Arabidopsis genome. DOI: 10.1186/gb-2002-3-4-research0016 ; PMID: 11983057
- Identification and characterization of the ARIADNE gene family in Arabidopsis. A group of putative E3 ligases. DOI: 10.1104/pp.012781 ; PMID: 12529512
- Computational identification of 69 retroposons in Arabidopsis. DOI: 10.1104/pp.105.060244 ; PMID: 15923328
- Repertoire of plant RING E3 ubiquitin ligases revisited: New groups counting gene families and single genes. DOI: 10.1371/journal.pone.0203442 ; PMID: 30169501
Gene Resources
- UniProt: A0A178VDF7
- EMBL: CACRSJ010000106, LUHQ01000003
- AlphaFoldDB: A0A178VDF7
- EnsemblPlants: AT3G27710.1
- Gramene: AT3G27710.1
- KEGG: ath:AT3G27710
- Orthologous matrix: VMTRMEC
- ExpressionAtlas: AT3G27710
- InterPro: IPR001841, IPR002867, IPR013083
- PANTHER: PTHR11685
- SUPFAM: SSF57850
- PROSITE: PS50089, PS51873
- Gene3D: 1.20.120.1750, 3.30.40.10
- SWISS-MODEL: A0A178VDF7
- Conserved Domain Database: cd16773, cd20346, cd22586
Homologs
- Malus domestica MDP0000266267, MDP0000286589
- Pyrus bretschneideri Pbr037384.1, Pbr011696.1, Pbr035981.1
- Setaria italica Seita.8G217300
- Setaria viridis SEVIR_8G228300v2
- Zea mays Zm00001d007709
Sequences
cDNA Sequence
- >AT3G27710.1
CTCGCCAACATATCTATGCGACTTTTCTTCTTCACTCTTTCCCTTGTTTTGGCTGTTGATAATCGTCTCCTCTGACGATTATCAAAATTTGTTGATCGATGGATGACGACTATATGATGTTAGATGATGATTACGGCGAGGAAGAGGATGAGAATTACTCGGAAGATGATAATTACAGCGAGGCAGAAGTCGATTTGCAACCCGTGACCTCGACAAAATCTACTAGCCAGGTGATAAAAAAGGAATCTCTAGTAGCAGCACAAAAAGAAATTCTGGTTAGGGTTATGGAATTGTTATCGGTTAAGGAGAACCAAGCTAGGACTCTTCTTATTTATTACCAATGGAACGTTGAGAAGTTGTTCTCTGTGTTTGCTGATCAAGGCAAAGATCGTATGTTTTCTTGTGCTGGTCTTACTGTTTTTGTTCCTTCTTTAGTTACTTCGAAGAAGACTATGAAATGTGATGTCTGCATGGAAGATGATTTACCAAGTAATGTGATGACGAGAATGGAATGTGGTCATAGGTTTTGCAATGATTGTTGGATAGGGCATTTTACTGTGAAGATTAATGAAGGTGAAAGCAAGAGGATTCTATGTATGGCTCATGAATGCAAAGCGATTTGCGATGAAGATGTTGTTAGGAAGCTAGTTAGTCCTGAATTAGCTGACAGGTATGATCGTTTCCTTATTGAATCTTATGTGGAAGATAACAATATGGTGAAGTGGTGTCCAAGTAAACCGCATTGCGGGAGTGCGATACGGAAAATCGAAGATGGTCATGACGTCGTTGAGGTTGGATGTTCATGTGGACTTCAGTTCTGTTTCAGTTGTTTGAGTGAGTCTCACTCTCCTTGCTCTTGTTTGATGTGGAAGCTATGGAAAAAGAAGTGTGAAGACGAGTCTGAGACGGTTAATTGGATAACCGTTAACACAAAGCTGTGTCCCAAATGTAGCAAACCTATTCAAAAGAGAGACGGTTGCAATCTCATGACTTGTAAGTGTGGGCAGCATTTTTGCTGGCTGTGTGGTCAAGCTACTGGAAGAGATCATACTTATACTAGTATTGCCGGTCATAGTTGTGGTCGGTACAAAGATGAAAAAGTGAGGCAATTGGAGAGAGCTCAAAGGGATTTAGACAGGTATACACATTACCATTACCGCTACAAAGCACATATCGATTCATTAAAGCTAGAGGATAAACTTAGGAAGAGTATCCTTGAGAAGGCAGTATCAAATTCTGAAACCAAGGATCAAAAGGTGTTTAAAGAATACAGCTGGGTTACAGATGCAGTCAACCGGTTATTCATATCGCGGCGGATTCTTTCGCAATCGTATCCTTTCGCGTTCTATATGTTCGGTGAAGAGCTGTTCAAAGATGAGATGAGTGAAAAAGAGAGAGAGATAAAGAAGAATCTGTTTGAAGATCAGCAGCAGCAACTTGAAGGTAATGTTGAGAAACTTTCCAAGATTTTAGAAGAGCCTTTTGATGAGTATGATCATGAAAAAGTTGTGGAGATGATGAGACACCTCACCAATTTGACTGCTGTGGTTGATAACCTCTGCAAGGAAATGTATGAGTGCATTGAGAATGAGTTATTAGGTCCAATACAATTTGGAAACCACAACATTGCACCTTACAGATCAAAGGGAATAGAACAAGCAACTGAGTTTTGTGCTGAATCTTCTGATTGTGGTTCAAGCGGATCTTCGTAGAATAAGAAGTTACTTCAATTATCTTTGTTTAACTATCTTTTTTATTTCATAGACATATGATGCAGCGTAGAATAGAAATGGTTCTTGGTTGTTATGGTTGGTTCTTGGTTGTCTATTCTTAATGCGAATTGTTTTCTGATTAGTTCAT
CDS Sequence
- >AT3G27710.1
ATGGATGACGACTATATGATGTTAGATGATGATTACGGCGAGGAAGAGGATGAGAATTACTCGGAAGATGATAATTACAGCGAGGCAGAAGTCGATTTGCAACCCGTGACCTCGACAAAATCTACTAGCCAGGTGATAAAAAAGGAATCTCTAGTAGCAGCACAAAAAGAAATTCTGGTTAGGGTTATGGAATTGTTATCGGTTAAGGAGAACCAAGCTAGGACTCTTCTTATTTATTACCAATGGAACGTTGAGAAGTTGTTCTCTGTGTTTGCTGATCAAGGCAAAGATCGTATGTTTTCTTGTGCTGGTCTTACTGTTTTTGTTCCTTCTTTAGTTACTTCGAAGAAGACTATGAAATGTGATGTCTGCATGGAAGATGATTTACCAAGTAATGTGATGACGAGAATGGAATGTGGTCATAGGTTTTGCAATGATTGTTGGATAGGGCATTTTACTGTGAAGATTAATGAAGGTGAAAGCAAGAGGATTCTATGTATGGCTCATGAATGCAAAGCGATTTGCGATGAAGATGTTGTTAGGAAGCTAGTTAGTCCTGAATTAGCTGACAGGTATGATCGTTTCCTTATTGAATCTTATGTGGAAGATAACAATATGGTGAAGTGGTGTCCAAGTAAACCGCATTGCGGGAGTGCGATACGGAAAATCGAAGATGGTCATGACGTCGTTGAGGTTGGATGTTCATGTGGACTTCAGTTCTGTTTCAGTTGTTTGAGTGAGTCTCACTCTCCTTGCTCTTGTTTGATGTGGAAGCTATGGAAAAAGAAGTGTGAAGACGAGTCTGAGACGGTTAATTGGATAACCGTTAACACAAAGCTGTGTCCCAAATGTAGCAAACCTATTCAAAAGAGAGACGGTTGCAATCTCATGACTTGTAAGTGTGGGCAGCATTTTTGCTGGCTGTGTGGTCAAGCTACTGGAAGAGATCATACTTATACTAGTATTGCCGGTCATAGTTGTGGTCGGTACAAAGATGAAAAAGTGAGGCAATTGGAGAGAGCTCAAAGGGATTTAGACAGGTATACACATTACCATTACCGCTACAAAGCACATATCGATTCATTAAAGCTAGAGGATAAACTTAGGAAGAGTATCCTTGAGAAGGCAGTATCAAATTCTGAAACCAAGGATCAAAAGGTGTTTAAAGAATACAGCTGGGTTACAGATGCAGTCAACCGGTTATTCATATCGCGGCGGATTCTTTCGCAATCGTATCCTTTCGCGTTCTATATGTTCGGTGAAGAGCTGTTCAAAGATGAGATGAGTGAAAAAGAGAGAGAGATAAAGAAGAATCTGTTTGAAGATCAGCAGCAGCAACTTGAAGGTAATGTTGAGAAACTTTCCAAGATTTTAGAAGAGCCTTTTGATGAGTATGATCATGAAAAAGTTGTGGAGATGATGAGACACCTCACCAATTTGACTGCTGTGGTTGATAACCTCTGCAAGGAAATGTATGAGTGCATTGAGAATGAGTTATTAGGTCCAATACAATTTGGAAACCACAACATTGCACCTTACAGATCAAAGGGAATAGAACAAGCAACTGAGTTTTGTGCTGAATCTTCTGATTGTGGTTCAAGCGGATCTTCGTAG
Protein Sequence
- >AT3G27710.1
MDDDYMMLDDDYGEEEDENYSEDDNYSEAEVDLQPVTSTKSTSQVIKKESLVAAQKEILVRVMELLSVKENQARTLLIYYQWNVEKLFSVFADQGKDRMFSCAGLTVFVPSLVTSKKTMKCDVCMEDDLPSNVMTRMECGHRFCNDCWIGHFTVKINEGESKRILCMAHECKAICDEDVVRKLVSPELADRYDRFLIESYVEDNNMVKWCPSKPHCGSAIRKIEDGHDVVEVGCSCGLQFCFSCLSESHSPCSCLMWKLWKKKCEDESETVNWITVNTKLCPKCSKPIQKRDGCNLMTCKCGQHFCWLCGQATGRDHTYTSIAGHSCGRYKDEKVRQLERAQRDLDRYTHYHYRYKAHIDSLKLEDKLRKSILEKAVSNSETKDQKVFKEYSWVTDAVNRLFISRRILSQSYPFAFYMFGEELFKDEMSEKEREIKKNLFEDQQQQLEGNVEKLSKILEEPFDEYDHEKVVEMMRHLTNLTAVVDNLCKEMYECIENELLGPIQFGNHNIAPYRSKGIEQATEFCAESSDCGSSGSS