Information report for AT3G27560
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
Literature and News
- Mitogen-activated protein kinase cascades in plants: a new nomenclature. DOI: 10.1016/s1360-1385(02)02302-6 ; PMID: 12119167
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- Combining experimental and predicted datasets for determination of the subcellular location of proteins in Arabidopsis. DOI: 10.1104/pp.105.065532 ; PMID: 16219920
- Genome-wide analysis and experimentation of plant serine/ threonine/tyrosine-specific protein kinases. DOI: 10.1007/s11103-005-4109-7 ; PMID: 16429265
- Mitosis-specific kinesins in Arabidopsis. DOI: 10.1016/j.tplants.2006.02.004 ; PMID: 16530461
- Comparison between a coffee single copy chromosomal region and Arabidopsis duplicated counterparts evidenced high level synteny between the coffee genome and the ancestral Arabidopsis genome. DOI: 10.1007/s11103-007-9191-6 ; PMID: 17551672
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Autophosphorylation profiling of Arabidopsis protein kinases using the cell-free system. DOI: 10.1016/j.phytochem.2011.02.029 ; PMID: 21477822
- A double-mutant collection targeting MAP kinase related genes in Arabidopsis for studying genetic interactions. DOI: 10.1111/tpj.13292 ; PMID: 27490954
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
Gene Resources
- UniProt: Q9LT56
- EMBL: AB025626, AY058062, AY090300
- AlphaFoldDB: Q9LT56
- EnsemblPlants: AT3G27560.1
- Gramene: AT3G27560.1
- KEGG: ath:AT3G27560
- Orthologous matrix: EMIVTSC
- ExpressionAtlas: AT3G27560
- InterPro: IPR000719, IPR001245, IPR008271
- PANTHER: PTHR23257, PTHR23257:SF973
- SUPFAM: SSF56112
- PROSITE: PS00107, PS00108, PS50011
- Gene3D: 1.10.510.10, 3.30.200.20
- OrthoDB: Q9LT56
- SWISS-MODEL: Q9LT56
- Conserved Domain Database: cd13999
Homologs
- Brassica napus GSBRNA2T00078148001
- Brassica oleracea Bol042904
- Brassica rapa Brara.F03193
Sequences
cDNA Sequence
- >AT3G27560.1
CACTAAAAAAAAGGATGAAAAAGACCCGTAAGTGTTTTTTCTTAAGAGATAGAGGAGATTTCTGGTCACCTCACCCCTCACTGACGCCTACGCGGAAAAAGCAAACAACTTTCGATTTCTTTACTCCTTTTTTTCCTTCTCTCTCAAAACCCCTAAAATAAGAAACTTCAAAAAAAATAATCATTAACCAAACCAACACGAATCATCAAAATTTTGACCATTTCTCCATCAGTTCCAGTGTCAACTTCAGTTCTTCTTCCCATTCTTCTCTCAAATTCCCATCTTTGCCGTTCAATGTTTTTGTTTTCTTTATGTAGTTGACGAAATTAGGATTTTGATTGTCGTGTTTCTTTCTTTATTCTGTGTTCGGGGAATCCTTTGATAATTTTCTCTCTTTATATTCCACCAAAAAAAAAAGCATCTTTTTTGTTTCTTTATCTATCTGATTGTTGTATAGTTTCTCAATTCCAAAACCAAACAGAATGATTAATCAATCAAAAAGGGCCCAGCTTTGACATATCTCTCTCTTTCTCTCTTTAGCCAACTAGGGTTTTTGTGATTTTTGTTCTGGGGTTGTTGTGGGAAAATGGGATCTGCAAGTGGGTTTTACTCGAACGAAGAGTTTGAATTGGATCCTAAATGGCTTGTTGATCCTCGTCATCTCTTTGTTGGTCCTAAGATCGGTGAAGGTGCTCATGCCAAAGTTTATGAGGGAAAGTATAGAAACCAAACAGTGGCGATTAAGATTATTAAAAGAGGAGAGTCCCCTGAAGAGATTGCTAAACGAGATAACCGGTTTGCGAGAGAGATTGCTATGTTGTCTAAAGTCCAGCACAAGAATTTAGTCAAGTTCATTGGAGCGTGCAAAGAACCCATGATGGTTATAGTTACTGAGCTTCTACTAGGCGGTACATTGCGTAAATATCTAGTCAGCTTACGGCCAAAGCGTTTAGACATTCGTTTGGCTGTTGGTTTTGCTCTTGACATTGCTCGTGCAATGGAATGTTTACATTCCCACGGTATCATTCACCGCGATCTTAAACCAGAGAATTTGATCTTATCAGCGGATCATAAGACAGTGAAACTCGCTGATTTCGGTTTAGCTAGAGAAGAATCATTAACCGAGATGATGACCGCAGAGACTGGTACATACCGATGGATGGCCCCCGAGCTCTACAGTACGGTTACGTTAAGGCAAGGAGAGAAGAAACACTATAATCATAAAGTAGATGCTTACAGCTTTGCCATTGTCTTGTGGGAACTTATTCTCAACAAGTTACCATTTGAAGGCATGTCAAATCTACAAGCAGCATATGCTGCTGCATTCAAGAACTTGAGGCCAAGTGCAGAGGATTTACCAGGAGACTTAGAGATGATTGTAACTTCATGCTGGAAAGAAGATCCTAACGAACGGCCAAATTTCACAGAGATAATTCAAATGCTCCTCCGTTACCTCACCACTGTTTCGGCACCACAGATCATTCCTCCACCGAATCGACGAGTCTTCTCATCAGAAAACATAGTTTTATCACCGGAATCTCCCGGAACTTGCTCTCTGATGTCTGTCAGAGACGGAGACGTTTCTCGTCAGACCGTTAACACTGCTGATTCATCGGAGAAACAAACAAAAGGAAGCTTCTTCTCCTGCTGCTCATAGATGATGTATTTCGTTGTGTAATCTGTAAAGAAAACGAGAGGAAAGTGTTTATGATGGAAAAAAGTATAATGTATTAAGATTAGAAATTTAGATCACAGTCACAAGAAATTGTTCGTGTATAAAAAATATTGAGCCTGAAACATTAATAATGTTTACGTTTTTGCATAAATGTCGAAAAAG
CDS Sequence
- >AT3G27560.1
ATGGGATCTGCAAGTGGGTTTTACTCGAACGAAGAGTTTGAATTGGATCCTAAATGGCTTGTTGATCCTCGTCATCTCTTTGTTGGTCCTAAGATCGGTGAAGGTGCTCATGCCAAAGTTTATGAGGGAAAGTATAGAAACCAAACAGTGGCGATTAAGATTATTAAAAGAGGAGAGTCCCCTGAAGAGATTGCTAAACGAGATAACCGGTTTGCGAGAGAGATTGCTATGTTGTCTAAAGTCCAGCACAAGAATTTAGTCAAGTTCATTGGAGCGTGCAAAGAACCCATGATGGTTATAGTTACTGAGCTTCTACTAGGCGGTACATTGCGTAAATATCTAGTCAGCTTACGGCCAAAGCGTTTAGACATTCGTTTGGCTGTTGGTTTTGCTCTTGACATTGCTCGTGCAATGGAATGTTTACATTCCCACGGTATCATTCACCGCGATCTTAAACCAGAGAATTTGATCTTATCAGCGGATCATAAGACAGTGAAACTCGCTGATTTCGGTTTAGCTAGAGAAGAATCATTAACCGAGATGATGACCGCAGAGACTGGTACATACCGATGGATGGCCCCCGAGCTCTACAGTACGGTTACGTTAAGGCAAGGAGAGAAGAAACACTATAATCATAAAGTAGATGCTTACAGCTTTGCCATTGTCTTGTGGGAACTTATTCTCAACAAGTTACCATTTGAAGGCATGTCAAATCTACAAGCAGCATATGCTGCTGCATTCAAGAACTTGAGGCCAAGTGCAGAGGATTTACCAGGAGACTTAGAGATGATTGTAACTTCATGCTGGAAAGAAGATCCTAACGAACGGCCAAATTTCACAGAGATAATTCAAATGCTCCTCCGTTACCTCACCACTGTTTCGGCACCACAGATCATTCCTCCACCGAATCGACGAGTCTTCTCATCAGAAAACATAGTTTTATCACCGGAATCTCCCGGAACTTGCTCTCTGATGTCTGTCAGAGACGGAGACGTTTCTCGTCAGACCGTTAACACTGCTGATTCATCGGAGAAACAAACAAAAGGAAGCTTCTTCTCCTGCTGCTCATAG
Protein Sequence
- >AT3G27560.1
MGSASGFYSNEEFELDPKWLVDPRHLFVGPKIGEGAHAKVYEGKYRNQTVAIKIIKRGESPEEIAKRDNRFAREIAMLSKVQHKNLVKFIGACKEPMMVIVTELLLGGTLRKYLVSLRPKRLDIRLAVGFALDIARAMECLHSHGIIHRDLKPENLILSADHKTVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVLWELILNKLPFEGMSNLQAAYAAAFKNLRPSAEDLPGDLEMIVTSCWKEDPNERPNFTEIIQMLLRYLTTVSAPQIIPPPNRRVFSSENIVLSPESPGTCSLMSVRDGDVSRQTVNTADSSEKQTKGSFFSCCS