Information report for AT3G27430
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
Functional Keywords
Literature and News
- Structure and functional analysis of the 26S proteasome subunits from plants. DOI: 10.1023/a:1006926322501 ; PMID: 10363660
- Molecular organization of the 20S proteasome gene family from Arabidopsis thaliana. DOI: 10.1093/genetics/149.2.677 ; PMID: 9611183
- The 20S proteasome gene family in Arabidopsis thaliana. DOI: 10.1016/s0014-5793(97)01228-3 ; PMID: 9373170
- OrthoParaMap: distinguishing orthologs from paralogs by integrating comparative genome data and gene phylogenies. DOI: 10.1186/1471-2105-4-35 ; PMID: 12952558
- Stress-induced protein S-glutathionylation in Arabidopsis. DOI: 10.1104/pp.104.058917 ; PMID: 16055689
- Proteomic analysis of different mutant genotypes of Arabidopsis led to the identification of 11 proteins correlating with adventitious root development. DOI: 10.1104/pp.105.067868 ; PMID: 16377752
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Affinity purification of the Arabidopsis 26 S proteasome reveals a diverse array of plant proteolytic complexes. DOI: 10.1074/jbc.M110.136622 ; PMID: 20516081
- Structure, function and regulation of plant proteasomes. DOI: 10.1016/j.biochi.2007.07.019 ; PMID: 17825468
- The m(6) A reader ECT2 post-transcriptionally regulates proteasome activity in Arabidopsis. DOI: 10.1111/nph.16660 ; PMID: 32416015
- Structure and functional analysis of the 26S proteasome subunits from plants. DOI: 10.1023/a:1006926322501 ; PMID: 10363660
- Molecular organization of the 20S proteasome gene family from Arabidopsis thaliana. DOI: 10.1093/genetics/149.2.677 ; PMID: 9611183
- The 20S proteasome gene family in Arabidopsis thaliana. DOI: 10.1016/s0014-5793(97)01228-3 ; PMID: 9373170
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: A0A178VCF7
- EMBL: CACRSJ010000106, CACSHJ010000089, LUHQ01000003
- AlphaFoldDB: A0A178VCF7
- EnsemblPlants: AT3G27430.2
- Gramene: AT3G27430.2
- KEGG: ath:AT3G27430
- ExpressionAtlas: AT3G27430
- InterPro: IPR000243, IPR001353, IPR016050
- PANTHER: PTHR32194, PTHR32194:SF4
- SUPFAM: SSF56235
- PROSITE: PS00854, PS51476
- Gene3D: 3.60.20.10
- OrthoDB: A0A178VCF7
- SWISS-MODEL: A0A178VCF7
- Conserved Domain Database: cd03763
Homologs
- Musa acuminata Ma00_g02730
- Oryza sativa OgPAE1, OsTT1;OsPAB1
Sequences
cDNA Sequence
- >AT3G27430.1
GGGGAAGAAGAAAACTCTCCTTCTTTTTGTAACTTTTGCTTCACCTCTCTCTTCTTCTCTTGTTCTATTTTTTTTCCCGATTCAAGCAAAATTCATCAAGACTTGTCAATTTGAAAAAATGTCGCAATCAACCGTAGATGTTCCGCCAAAGGGTGGGTTTAGCTTCGATCTGTGTAAGAGAAATGATATGCTTACACAAAAGGGTCTTAAAGCTCCGTCTTTTTTGAAGACTGGAACAACCATTGTTGGTTTGATTTTCAAGGATGGTGTGATACTAGGGGCAGATACCCGAGCAACTGAGGGGCCAATTGTTGCTGATAAGAACTGTGAGAAGATTCACTATATGGCACCAAACATATATTGCTGTGGTGCAGGAACTGCGGCTGATACTGAAGCAGTCACTGATATGGTCAGCTCACAGCTGCGATTGCATCGTTACCAGACTGGTCGAGACTCTCGGGTCATTACTGCTTTGACCCTTCTCAAAAAACATCTTTTCAGCTACCAAGGTCATGTCTCTGCTGCTCTTGTACTCGGTGGAGTTGATATCACTGGTCCACATCTGCATACTATATACCCACACGGTTCAACTGACACTCTTCCATTCGCCACAATGGGTTCGGGTTCTCTTGCTGCTATGTCTGTGTTTGAGGCAAAGTATAAAGAAGGCCTAACTAGGGATGAAGGAATTAAGCTGGTCGCTGAATCCATATGCTCGGGTATATTCAATGACCTGGGTAGTGGTAGCAACGTGGACATCTGCGTGATCACAAAGGGGAACAAGGAATATCTCAGGAACTACATGGAACCAAACCCAAGAACCTATGTCAGCAGCAAAGGCTATTCCTTCACCAAGAAAACTGGTTCTTCTCACCAAAATCACCCCATTGCTGGAGCGAGTCGAAATCACAGAAGTTGGTGAAGCTATGGAGGAATAATTCAATCAATCTCATATATCTTCTTTTGCATTGATCTACATCAAGGCTCTGTGTACTCTCATGATCTCATCTTCCCAGTCTTGTCTTCTTCCCATGTTTAAGGATCATTCAAATCTTGTTACTCCTCTCTCTCCTTCTTAGATTTCAATAGAGAGGGTCAGACTCGAGAGACTTCGTCCTTTCGAAATAAAAAAACAACTTTCCCTAAATTATTATTGGTTTGTGCAAACCGAATTGAATTGTACAAGCTGTTTAACCAAATCTCCTAATACGACGTCGCTTTTTGTCTC - >AT3G27430.3
GGGGAAGAAGAAAACTCTCCTTCTTTTTGTAACTTTTGCTTCACCTCTCTCTTCTTCTCTTGTTCTATTTTTTTTCCCGATTCAAGCAAAATTCATCAAGACTTGTCAATTTGAAAAAATGTCGCAATCAACCGTAGATGTTCCGCCAAAGGGTGGGTTTAGCTTCGATCTGTGTAAGAGAAATGATATGCTTACACAAAAGGGTCTTAAAGCTCCGTCTTTTTTGAAGACTGGAACAACCATTGTTGGTTTGATTTTCAAGGATGGTGTGATACTAGGGGCAGATACCCGAGCAACTGAGGGGCCAATTGTTGCTGATAAGAACTGTGAGAAGATTCACTATATGGCACCAAACATATATTGCTGTGGTGCAGGAACTGCGGCTGATACTGAAGCAGTCACTGATATGGTCAGCTCACAGCTGCGATTGCATCGTTACCAGACTGGTCGAGACTCTCGGGTCATTACTGCTTTGACCCTTCTCAAAAAACATCTTTTCAGCTACCAAGGTCATGTCTCTGCTGCTCTTGTACTCGGTGGAGTTGATATCACTGGTCCACATCTGCATACTATATACCCACACGGTTCAACTGACACTCTTCCATTCGCCACAATGGGTTCGGGTTCTCTTGCTGCTATGTCTGTGTTTGAGGCAAAGTATAAAGAAGGCCTAACTAGGGATGAAGGAATTAAGCTGGTCGCTGAATCCATATGCTCGGGTATATTCAATGACCTGGGTAGTGGTAGCAACGTGGACATCTGCGTGATCACAAAGGGGAACAAGGAATATCTCAGGAACTACATGGAACCAAACCCAAGAACCTATGTCAGCAGCAAAGGCTATTCCTTCACCAAGAAAACTGGTTCTTCTCACCAAAATCACCCCATTGCTGGAGCGAGTCGAAATCACAGAAGTTGGTGAAGCTATGGAGGAATAATTCAATCAATCTCATATATCTTCTTTTGCATTGATCTACATCAAGGCTCTGTGTACTCTCATGATCTCATCTTCCCAGTCTTGTCTTCTTCCCATGTTTAAGGATCATTCAAATCTTGTTACTCCTCTCTCTCCTTCTTAGATTTCAATAGAGAGGGTCAGACTCGAGAGACTTCGTCCTTTCGAAATAAAAAAACAACTTTCCCTAAATTATTATTGGTTTGTGCAAACCGAATTGAATTGTACAAGCTGTTTAACCAAATCTCCTAATACGACGTCGCTTTTTGTCTC - >AT3G27430.2
GGGGAAGAAGAAAACTCTCCTTCTTTTTGTAACTTTTGCTTCACCTCTCTCTTCTTCTCTTGTTCTATTTTTTTTCCCGATTCAAGCAAAATTCATCAAGACTTGTCAATTTGAAAAAATGTCGCAATCAACCGTAGATGTTCCGCCAAAGGGTGGGTTTAGCTTCGATCTGTGTAAGAGAAATGATATGCTTACACAAAAGGGTCTTAAAGCTCCGTCTTTTTTGAAGACTGGAACAACCATTGTTGGTTTGATTTTCAAGGATGGTGTGATACTAGGGGCAGATACCCGAGCAACTGAGGGGCCAATTGTTGCTGATAAGAACTGTGAGAAGATTCACTATATGGCACCAAACATATATTGCTGTGGTGCAGGAACTGCGGCTGATACTGAAGCAGTCACTGATATGGTCAGCTCACAGCTGCGATTGCATCGTTACCAGACTGGTCGAGACTCTCGGGTCATTACTGCTTTGACCCTTCTCAAAAAACATCTTTTCAGCTACCAAGGTCATGTCTCTGCTGCTCTTGTACTCGGTGGAGTTGATATCACTGGTCCACATCTGCATACTATATACCCACACGGTTCAACTGACACTCTTCCATTCGCCACAATGGGTTCGGGTTCTCTTGCTGCTATGTCTGTGTTTGAGGCAAAGTATAAAGAAGGCCTAACTAGGGATGAAGGAATTAAGCTGGTCGCTGAATCCATATGCTCGGGTATATTCAATGACCTGGGTAGTGGTAGCAACGTGGACATCTGCGTGATCACAAAGGGGAACAAGGAATATCTCAGGAACTACATGGAACCAAACCCAAGAACCTATGTCAGCAGCAAAGGCTATTCCTTCACCAAGAAAACTGGTTCTTCTCACCAAAATCACCCCATTGCTGGAGCGAGTCGAAATCACAGAAGTTGGTGAAGCTATGGAGGAATAATTCAATCAATCTCATATATCTTCTTTTGCATTGATCTACATCAAGGCTCTGTGTACTCTCATGATCTCATCTTCCCAGTCTTGTCTTCTTCCCATGTTTAAGGATCATTCAAATCTTGTTACTCCTCTCTCTCCTTCTTAGATTTCAATAGAGAGGGTCAGACTCGAGAGACTTCGTCCTTTCGAAATAAAAAAACAACTTTCCCTAAATTATTATTGGTTTGTGCAAACCGAATTGAATTGTACAAGCTGTTTAACCAAATCTCCTAATACGACGTCGCTTTTTGTCTC
CDS Sequence
- >AT3G27430.1
ATGTCGCAATCAACCGTAGATGTTCCGCCAAAGGGTGGGTTTAGCTTCGATCTGTGTAAGAGAAATGATATGCTTACACAAAAGGGTCTTAAAGCTCCGTCTTTTTTGAAGACTGGAACAACCATTGTTGGTTTGATTTTCAAGGATGGTGTGATACTAGGGGCAGATACCCGAGCAACTGAGGGGCCAATTGTTGCTGATAAGAACTGTGAGAAGATTCACTATATGGCACCAAACATATATTGCTGTGGTGCAGGAACTGCGGCTGATACTGAAGCAGTCACTGATATGGTCAGCTCACAGCTGCGATTGCATCGTTACCAGACTGGTCGAGACTCTCGGGTCATTACTGCTTTGACCCTTCTCAAAAAACATCTTTTCAGCTACCAAGGTCATGTCTCTGCTGCTCTTGTACTCGGTGGAGTTGATATCACTGGTCCACATCTGCATACTATATACCCACACGGTTCAACTGACACTCTTCCATTCGCCACAATGGGTTCGGGTTCTCTTGCTGCTATGTCTGTGTTTGAGGCAAAGTATAAAGAAGGCCTAACTAGGGATGAAGGAATTAAGCTGGTCGCTGAATCCATATGCTCGGGTATATTCAATGACCTGGGTAGTGGTAGCAACGTGGACATCTGCGTGATCACAAAGGGGAACAAGGAATATCTCAGGAACTACATGGAACCAAACCCAAGAACCTATGTCAGCAGCAAAGGCTATTCCTTCACCAAGAAAACTGGTTCTTCTCACCAAAATCACCCCATTGCTGGAGCGAGTCGAAATCACAGAAGTTGGTGA - >AT3G27430.3
ATGTCGCAATCAACCGTAGATGTTCCGCCAAAGGGTGGGTTTAGCTTCGATCTGTGTAAGAGAAATGATATGCTTACACAAAAGGGTCTTAAAGCTCCGTCTTTTTTGAAGACTGGAACAACCATTGTTGGTTTGATTTTCAAGGATGGTGTGATACTAGGGGCAGATACCCGAGCAACTGAGGGGCCAATTGTTGCTGATAAGAACTGTGAGAAGATTCACTATATGGCACCAAACATATATTGCTGTGGTGCAGGAACTGCGGCTGATACTGAAGCAGTCACTGATATGGTCAGCTCACAGCTGCGATTGCATCGTTACCAGACTGGTCGAGACTCTCGGGTCATTACTGCTTTGACCCTTCTCAAAAAACATCTTTTCAGCTACCAAGGTCATGTCTCTGCTGCTCTTGTACTCGGTGGAGTTGATATCACTGGTCCACATCTGCATACTATATACCCACACGGTTCAACTGACACTCTTCCATTCGCCACAATGGGTTCGGGTTCTCTTGCTGCTATGTCTGTGTTTGAGGCAAAGTATAAAGAAGGCCTAACTAGGGATGAAGGAATTAAGCTGGTCGCTGAATCCATATGCTCGGGTATATTCAATGACCTGGGTAGTGGTAGCAACGTGGACATCTGCGTGATCACAAAGGGGAACAAGGAATATCTCAGGAACTACATGGAACCAAACCCAAGAACCTATGTCAGCAGCAAAGGCTATTCCTTCACCAAGAAAACTGGTTCTTCTCACCAAAATCACCCCATTGCTGGAGCGAGTCGAAATCACAGAAGTTGGTGA - >AT3G27430.2
ATGTCGCAATCAACCGTAGATGTTCCGCCAAAGGGTGGGTTTAGCTTCGATCTGTGTAAGAGAAATGATATGCTTACACAAAAGGGTCTTAAAGCTCCGTCTTTTTTGAAGACTGGAACAACCATTGTTGGTTTGATTTTCAAGGATGGTGTGATACTAGGGGCAGATACCCGAGCAACTGAGGGGCCAATTGTTGCTGATAAGAACTGTGAGAAGATTCACTATATGGCACCAAACATATATTGCTGTGGTGCAGGAACTGCGGCTGATACTGAAGCAGTCACTGATATGGTCAGCTCACAGCTGCGATTGCATCGTTACCAGACTGGTCGAGACTCTCGGGTCATTACTGCTTTGACCCTTCTCAAAAAACATCTTTTCAGCTACCAAGGTCATGTCTCTGCTGCTCTTGTACTCGGTGGAGTTGATATCACTGGTCCACATCTGCATACTATATACCCACACGGTTCAACTGACACTCTTCCATTCGCCACAATGGGTTCGGGTTCTCTTGCTGCTATGTCTGTGTTTGAGGCAAAGTATAAAGAAGGCCTAACTAGGGATGAAGGAATTAAGCTGGTCGCTGAATCCATATGCTCGGGTATATTCAATGACCTGGGTAGTGGTAGCAACGTGGACATCTGCGTGATCACAAAGGGGAACAAGGAATATCTCAGGAACTACATGGAACCAAACCCAAGAACCTATGTCAGCAGCAAAGGCTATTCCTTCACCAAGAAAACTGGTTCTTCTCACCAAAATCACCCCATTGCTGGAGCGAGTCGAAATCACAGAAGTTGGTGA
Protein Sequence
- >AT3G27430.1
MSQSTVDVPPKGGFSFDLCKRNDMLTQKGLKAPSFLKTGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLRLHRYQTGRDSRVITALTLLKKHLFSYQGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAESICSGIFNDLGSGSNVDICVITKGNKEYLRNYMEPNPRTYVSSKGYSFTKKTGSSHQNHPIAGASRNHRSW - >AT3G27430.3
MSQSTVDVPPKGGFSFDLCKRNDMLTQKGLKAPSFLKTGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLRLHRYQTGRDSRVITALTLLKKHLFSYQGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAESICSGIFNDLGSGSNVDICVITKGNKEYLRNYMEPNPRTYVSSKGYSFTKKTGSSHQNHPIAGASRNHRSW - >AT3G27430.2
MSQSTVDVPPKGGFSFDLCKRNDMLTQKGLKAPSFLKTGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLRLHRYQTGRDSRVITALTLLKKHLFSYQGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAESICSGIFNDLGSGSNVDICVITKGNKEYLRNYMEPNPRTYVSSKGYSFTKKTGSSHQNHPIAGASRNHRSW