Information report for AT3G27380
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Functional Keywords
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , pollen tube cell , pollen , guard cell
Literature and News
- The four subunits of mitochondrial respiratory complex II are encoded by multiple nuclear genes and targeted to mitochondria in Arabidopsis thaliana. DOI: 10.1023/a:1019926301981 ; PMID: 12374303
- Antagonistic control of oxidative stress-induced cell death in Arabidopsis by two related, plant-specific zinc finger proteins. DOI: 10.1073/pnas.1130421100 ; PMID: 12732715
- New insights into the respiratory chain of plant mitochondria. Supercomplexes and a unique composition of complex II. DOI: 10.1104/pp.103.024620 ; PMID: 12970493
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- Deficiency of Arabidopsis thaliana frataxin alters activity of mitochondrial Fe-S proteins and induces oxidative stress. DOI: 10.1111/j.1365-313X.2006.02923.x ; PMID: 17092311
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Characterization of Arabidopsis lines deficient in GAPC-1, a cytosolic NAD-dependent glyceraldehyde-3-phosphate dehydrogenase. DOI: 10.1104/pp.108.128769 ; PMID: 18820081
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Functional and composition differences between mitochondrial complex II in Arabidopsis and rice are correlated with the complex genetic history of the enzyme. DOI: 10.1007/s11103-009-9573-z ; PMID: 19924544
- Divalent metal ions in plant mitochondria and their role in interactions with proteins and oxidative stress-induced damage to respiratory function. DOI: 10.1104/pp.109.147942 ; PMID: 20018591
- The mitochondrial LYR protein SDHAF1 is required for succinate dehydrogenase activity in Arabidopsis. DOI: 10.1111/tpj.15684 ; PMID: 35080330
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- The hydrophobic proteome of mitochondrial membranes from Arabidopsis cell suspensions. DOI: 10.1016/j.phytochem.2004.03.028 ; PMID: 15276431
Gene Resources
- UniProt: A0A178VCX3
- EMBL: CACRSJ010000106, CACSHJ010000089, LR881468
- AlphaFoldDB: A0A178VCX3
- EnsemblPlants: AT3G27380.1, AT3G27380.2
- Gramene: AT3G27380.1, AT3G27380.2
- KEGG: ath:AT3G27380
- Orthologous matrix: SNMKTFQ
- ExpressionAtlas: AT3G27380
- InterPro: IPR001041, IPR004489, IPR006058
- PANTHER: PTHR11921, PTHR11921:SF29
- SUPFAM: SSF46548, SSF54292
- PROSITE: PS00197, PS00198, PS51085
- Gene3D: 1.10.1060.10, 3.10.20.30
- OrthoDB: A0A178VCX3
- SWISS-MODEL: A0A178VCX3
Homologs
- Oryza sativa RPS14;OsSDH2-1, OsSDH2-2
Sequences
cDNA Sequence
- >AT3G27380.1
CGGCACTTATACGTAGATGAACCTAAGCCTCACATTTACAAATATGCACACGTAGCTATAATCCCCTGTGTCTCTATAAATTTATATTTTATATTCCCTAAATCGTCAATTTCGGCTAATTTCAAGTTATTATAAATTAATTATCTTCTGAAAAATATAAATACTTGAATTAATTTTTTAGCCATTTTCAGATTTCTCCGAGGAAAAAAATGGCGTCTGGTTTGATCGGAAGATTGGTTGGAACGAAACCGTCGAAATTAGCCACGGCGGCGAGGTTAATTCCGGCGAGATGGACCTCTACAGGAGCGGAGGCGGAAACAAAAGCTTCCTCTGGCGGCGGAAGAGGATCGAACTTGAAGACTTTTCAGATCTATCGATGGAATCCAGATAATCCAGGGAAGCCAGAGCTTCAAAATTACCAGATCGATCTCAAAGATTGTGGTCCAATGGTATTAGATGCTTTGATTAAGATCAAAAACGAAATGGATCCATCTCTTACTTTCCGTAGATCATGCCGTGAAGGGATCTGTGGTTCATGTGCTATGAACATTGATGGATGTAACGGACTTGCTTGTTTGACAAAGATTCAAGATGAAGCATCGGAGACGACGATTACACCGTTGCCTCATATGTTTGTGATTAAGGATTTGGTTGTTGATATGACTAATTTTTATAATCAGTATAAGAGTATTGAGCCGTGGTTGAAGAGGAAGACTCCAGCGTCTGTTCCTGCTAAGGAGATTTTGCAGAGTAAGAAGGATAGAGCTAAGCTTGATGGGATGTATGAATGTATTCTTTGTGCTTGTTGTAGCACATCTTGTCCTAGTTACTGGTGGAATCCTGAGTCTTACCTTGGTCCAGCTGCTTTGCTACACGCTAATAGGTGGATAAGCGACAGTCGTGATGAGTACACTAAGGAAAGACTTGAGGCTATTGACGACGAGTTCAAGCTTTACCGTTGCCATACAATCTTGAATTGTGCTCGTGCCTGTCCAAAGGGTTTGAACCCAGGAAAACAGATTACTCACATCAAGCAACTTCAGCGTTGAAACAGCTAAGTTTGTGTGCGGGATCCGTTGGGAAACTCATCAGTCTTAACGTTTGAAGCTAATAATCTTCACAAAACCTCTTCGGATTTTCAATTCATTCTTGTATTGTTGTTGCCAAATATTAGCGCCTTAAAAAAACTCGTTTGCAAGTCTTCCCAAGTAGATGAGCTTTGTGGTTGTATCTTGCTGAAAATCTCCTCTTTAAGTAATAAAACTCGAGTAAACTTAAACCTCATCTACTTATCATCTACTCTTTTGTGTTCCCTCTGCATTGGCCTATGATAAAATCATTTCATGTACTTGTGTCTCTGCCTTCTGTACACATGAACACAACGTGATGTATTATCAATCATAGCTTAATCATAGAAAAGTATCAATCATAACTTCCTTGACATTTATGATTGACTGCGTAAGTATAACTGCAAGTACTGATCACACAACAAACAAGAAAGATGACACCGGCAACACTAGCTATATTCTTTGTCTCTTTGGTTACTATTGGAACAGCAACCGATGTTGCTCCAGCAACTAAACAACAGTTTGAGTTCTTTCCGAGCTTGCGGGAGCATCAGAAGTCTCTATTTGTTACTGTGGAAGGCTGCAACAACCATTGCCTAACAGCTTGCTGTGACTGCAACATAGAAAAACAGCCTCCCGTTTGTGTTCAGTGTTGCCCGATTTGAGCCTTGAACTCCTTATGTTCATGTATGTTTGAAGACTAGAGACAATGTAGAAGATTTAAAACACAATTCAGGATGTCAAACTTGTGAAACAGAGGAAGCTTATGTGATATTTTATAAGTAAAAAAAACAGATATCACAAATAGAGAGAGATCAGAGTTTGTATTGTAAAAGCCTACAAATTTTCGCAATCTGTTGATGGAATAAATTCATTGAACAGATCGTAATATCAAAGATGAAAACACTTCTGTCTCACTCAGAGTCTTTGGATCACAAACACCGTTACACATCGCAATAATTAACACGTCATCATAAATATCCCACGTGTAGAATCCTCGACAACTGAAAGAATCACTCTGATTGGTTACTTAACATACGACGCAGATAGCAAAGATAAAAACAATCTTGACCGTTTAGAGGAAAACACATCTAACGGACCAAATTCTCTCTTCTTTGAGTATAAAAAAGCATCCCAACCTCACTCTGTATATACCAATCAAACACGACAGTCTCAACAATCAAAAGCTTCAAATTTTTCATTGTCAAGAATTCTCAAAATGGCTAGAACAAAGCAAACAGCTAGAAAATCCACCGGAGGAAAAGCTCCTAGAAAGCAACTGGCGACGAAAGCAGCAAGGAAATCAGCTCCAGCCACCGGAGGAGTGAAGAAGCCACACAGATTCCGTCCAGGAACAGTAGCGTTACGTGAAATCAGAAAGTATCAAAAAAGCACAGAGCTTTTGATCCGTAAGCTTCCTTTCCAGAGATTGGTTCGTGAGATAGCTCAAGATTTCAAGACGGATCTTAGGTTTCAGAG - >AT3G27380.2
CGGCACTTATACGTAGATGAACCTAAGCCTCACATTTACAAATATGCACACGTAGCTATAATCCCCTGTGTCTCTATAAATTTATATTTTATATTCCCTAAATCGTCAATTTCGGCTAATTTCAAGTTATTATAAATTAATTATCTTCTGAAAAATATAAATACTTGAATTAATTTTTTAGCCATTTTCAGATTTCTCCGAGGAAAAAAATGGCGTCTGGTTTGATCGGAAGATTGGTTGGAACGAAACCGTCGAAATTAGCCACGGCGGCGAGGTTAATTCCGGCGAGATGGACCTCTACAGGAGCGGAGGCGGAAACAAAAGCTTCCTCTGGCGGCGGAAGAGGATCGAACTTGAAGACTTTTCAGATCTATCGATGGAATCCAGATAATCCAGGGAAGCCAGAGCTTCAAAATTACCAGATCGATCTCAAAGATTGTGGTCCAATGGTATTAGATGCTTTGATTAAGATCAAAAACGAAATGGATCCATCTCTTACTTTCCGTAGATCATGCCGTGAAGGGATCTGTGGTTCATGTGCTATGAACATTGATGGATGTAACGGACTTGCTTGTTTGACAAAGATTCAAGATGAAGCATCGGAGACGACGATTACACCGTTGCCTCATATGTTTGTGATTAAGGATTTGGTTGTTGATATGACTAATTTTTATAATCAGTATAAGAGTATTGAGCCGTGGTTGAAGAGGAAGACTCCAGCGTCTGTTCCTGCTAAGGAGATTTTGCAGAGTAAGAAGGATAGAGCTAAGCTTGATGGGATGTATGAATGTATTCTTTGTGCTTGTTGTAGCACATCTTGTCCTAGTTACTGGTGGAATCCTGAGTCTTACCTTGGTCCAGCTGCTTTGCTACACGCTAATAGGTGGATAAGCGACAGTCGTGATGAGTACACTAAGGAAAGACTTGAGGCTATTGACGACGAGTTCAAGCTTTACCGTTGCCATACAATCTTGAATTGTGCTCGTGCCTGTCCAAAGGGTTTGAACCCAGGAAAACAGATTACTCACATCAAGCAACTTCAGCGTTGAAACAGCTAAGTTTGTGTGCGGGATCCGTTGGGAAACTCATCAGTCTTAACGTTTGAAGCTAATAATCTTCACAAAACCTCTTCGGATTTTCAATTCATTCTTGTATTGTTGTTGCCAAATATTAGCGCCTTAAAAAAACTCGTTTGCAAGTCTTCCCAAGTAGATGAGCTTTGTGGTTGTATCTTGCTGAAAATCTCCTCTTTAAGTAATAAAACTCGAGTAAACTTAAACCTCATCTACTTATCATCTACTCTTTTGTGTTCCCTCTGCATTGGCCTATGATAAAATCATTTCATGTACTTGTGTCTCTGCCTTCTGTACACATGAACACAACGTGATGTATTATCAATCATAGCTTAATCATAGAAAAGTATCAATCATAACTTCCTTGACATTTATGATTGACTGCGTAAGTATAACTGCAAGTACTGATCACACAACAAACAAGAAAGATGACACCGGCAACACTAGCTATATTCTTTGTCTCTTTGGTTACTATTGGAACAGCAACCGATGTTGCTCCAGCAACTAAACAACAGTTTGAGTTCTTTCCGAGCTTGCGGGAGCATCAGAAGTCTCTATTTGTTACTGTGGAAGGCTGCAACAACCATTGCCTAACAGCTTGCTGTGACTGCAACATAGAAAAACAGCCTCCCGTTTGTGTTCAGTGTTGCCCGATTTGAGCCTTGAACTCCTTATGTTCATGTATGTTTGAAGACTAGAGACAATGTAGAAGATTTAAAACACAATTCAGGATGTCAAACTTGTGAAACAGAGGAAGCTTATGTGATATTTTATAAGTAAAAAAAACAGATATCACAAATAGAGAGAGATCAGAGTTTGTATTGTAAAAGCCTACAAATTTTCGCAATCTGTTGATGGAATAAATTCATTGAACAGATCGTAATATCAAAGATGAAAACACTTCTGTCTCACTCAGAGTCTTTGGATCACAAACACCGTTACACATCGCAATAATTAACACGTCATCATAAATATCCCACGTGTAGAATCCTCGACAACTGAAAGAATCACTCTGATTGGTTACTTAACATACGACGCAGATAGCAAAGATAAAAACAATCTTGACCGTTTAGAGGAAAACACATCTAACGGACCAAATTCTCTCTTCTTTGAGTATAAAAAAGCATCCCAACCTCACTCTGTATATACCAATCAAACACGACAGTCTCAACAATCAAAAGCTTCAAATTTTTCATTGTCAAGAATTCTCAAAATGGCTAGAACAAAGCAAACAGCTAGAAAATCCACCGGAGGAAAAGCTCCTAGAAAGCAACTGGCGACGAAAGCAGCAAGGAAATCAGCTCCAGCCACCGGAGGAGTGAAGAAGCCACACAGATTCCGTCCAGGAACAGTAGCGTTACGTGAAATCAGAAAGTATCAAAAAAGCACAGAGCTTTTGATCCGTAAGCTTCCTTTCCAGAGATTGGTTCGTGAGATAGCTCAAGATTTCAAGACGGATCTTAGGTTTCAGAG
CDS Sequence
- >AT3G27380.1
ATGGCGTCTGGTTTGATCGGAAGATTGGTTGGAACGAAACCGTCGAAATTAGCCACGGCGGCGAGGTTAATTCCGGCGAGATGGACCTCTACAGGAGCGGAGGCGGAAACAAAAGCTTCCTCTGGCGGCGGAAGAGGATCGAACTTGAAGACTTTTCAGATCTATCGATGGAATCCAGATAATCCAGGGAAGCCAGAGCTTCAAAATTACCAGATCGATCTCAAAGATTGTGGTCCAATGGTATTAGATGCTTTGATTAAGATCAAAAACGAAATGGATCCATCTCTTACTTTCCGTAGATCATGCCGTGAAGGGATCTGTGGTTCATGTGCTATGAACATTGATGGATGTAACGGACTTGCTTGTTTGACAAAGATTCAAGATGAAGCATCGGAGACGACGATTACACCGTTGCCTCATATGTTTGTGATTAAGGATTTGGTTGTTGATATGACTAATTTTTATAATCAGTATAAGAGTATTGAGCCGTGGTTGAAGAGGAAGACTCCAGCGTCTGTTCCTGCTAAGGAGATTTTGCAGAGTAAGAAGGATAGAGCTAAGCTTGATGGGATGTATGAATGTATTCTTTGTGCTTGTTGTAGCACATCTTGTCCTAGTTACTGGTGGAATCCTGAGTCTTACCTTGGTCCAGCTGCTTTGCTACACGCTAATAGGTGGATAAGCGACAGTCGTGATGAGTACACTAAGGAAAGACTTGAGGCTATTGACGACGAGTTCAAGCTTTACCGTTGCCATACAATCTTGAATTGTGCTCGTGCCTGTCCAAAGGGTTTGAACCCAGGAAAACAGATTACTCACATCAAGCAACTTCAGCGTTGA - >AT3G27380.2
ATGGCGTCTGGTTTGATCGGAAGATTGGTTGGAACGAAACCGTCGAAATTAGCCACGGCGGCGAGGTTAATTCCGGCGAGATGGACCTCTACAGGAGCGGAGGCGGAAACAAAAGCTTCCTCTGGCGGCGGAAGAGGATCGAACTTGAAGACTTTTCAGATCTATCGATGGAATCCAGATAATCCAGGGAAGCCAGAGCTTCAAAATTACCAGATCGATCTCAAAGATTGTGGTCCAATGGTATTAGATGCTTTGATTAAGATCAAAAACGAAATGGATCCATCTCTTACTTTCCGTAGATCATGCCGTGAAGGGATCTGTGGTTCATGTGCTATGAACATTGATGGATGTAACGGACTTGCTTGTTTGACAAAGATTCAAGATGAAGCATCGGAGACGACGATTACACCGTTGCCTCATATGTTTGTGATTAAGGATTTGGTTGTTGATATGACTAATTTTTATAATCAGTATAAGAGTATTGAGCCGTGGTTGAAGAGGAAGACTCCAGCGTCTGTTCCTGCTAAGGAGATTTTGCAGAGTAAGAAGGATAGAGCTAAGCTTGATGGGATGTATGAATGTATTCTTTGTGCTTGTTGTAGCACATCTTGTCCTAGTTACTGGTGGAATCCTGAGTCTTACCTTGGTCCAGCTGCTTTGCTACACGCTAATAGGTGGATAAGCGACAGTCGTGATGAGTACACTAAGGAAAGACTTGAGGCTATTGACGACGAGTTCAAGCTTTACCGTTGCCATACAATCTTGAATTGTGCTCGTGCCTGTCCAAAGGGTTTGAACCCAGGAAAACAGATTACTCACATCAAGCAACTTCAGCGTTGA
Protein Sequence
- >AT3G27380.1
MASGLIGRLVGTKPSKLATAARLIPARWTSTGAEAETKASSGGGRGSNLKTFQIYRWNPDNPGKPELQNYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIQDEASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPASVPAKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQR - >AT3G27380.2
MASGLIGRLVGTKPSKLATAARLIPARWTSTGAEAETKASSGGGRGSNLKTFQIYRWNPDNPGKPELQNYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIQDEASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPASVPAKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQR