Information report for AT3G27280
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- GO:0005747 — part of — mitochondrial respiratory chain complex I
- GO:0005739 — located in — mitochondrion
- GO:0000325 — located in — plant-type vacuole
- GO:0007005 — involved in — mitochondrion organization
- GO:0005829 — located in — cytosol
- GO:0005739 — is active in — mitochondrion
- GO:0005886 — located in — plasma membrane
- GO:0009536 — located in — plastid
- GO:0009505 — located in — plant-type cell wall
Functional Keywords
Literature and News
- Analysis of the Arabidopsis mitochondrial proteome. DOI: 6919 ; PMID: 11743115
- Genomic and proteomic analysis of mitochondrial carrier proteins in Arabidopsis. DOI: 10.1104/pp.009985 ; PMID: 12586869
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- The carboxylesterase gene family from Arabidopsis thaliana. DOI: 10.1007/s00239-003-2492-8 ; PMID: 14738307
- Identification of new intrinsic proteins in Arabidopsis plasma membrane proteome. DOI: 10.1074/mcp.M400001-MCP200 ; PMID: 15060130
- Isolation of intact vacuoles and proteomic analysis of tonoplast from suspension-cultured cells of Arabidopsis thaliana. DOI: 10.1093/pcp/pch099 ; PMID: 15215502
- The hydrophobic proteome of mitochondrial membranes from Arabidopsis cell suspensions. DOI: 10.1016/j.phytochem.2004.03.028 ; PMID: 15276431
- The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. DOI: 10.1105/tpc.104.027078 ; PMID: 15539469
- Arabidopsis cell wall proteome defined using multidimensional protein identification technology. DOI: 10.1002/pmic.200500046 ; PMID: 16287169
- cDNA-AFLP analysis of seed germination in Arabidopsis thaliana identifies transposons and new genomic sequences. DOI: 10.1016/j.jplph.2005.04.032 ; PMID: 16455359
- Comparison of gene expression in segregating families identifies genes and genomic regions involved in a novel adaptation, zinc hyperaccumulation. DOI: 10.1111/j.1365-294X.2006.02981.x ; PMID: 16911220
- Resolving and identifying protein components of plant mitochondrial respiratory complexes using three dimensions of gel electrophoresis. DOI: 10.1021/pr700595p ; PMID: 18189341
- OPENER Is a Nuclear Envelope and Mitochondria Localized Protein Required for Cell Cycle Progression in Arabidopsis. DOI: 10.1105/tpc.19.00033 ; PMID: 31023726
- Presequence translocase-associated motor subunits of the mitochondrial protein import apparatus are dual-targeted to mitochondria and plastids. DOI: 10.3389/fpls.2022.981552 ; PMID: 36438081
- Analysis of the Arabidopsis mitochondrial proteome. DOI: 6919 ; PMID: 11743115
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
- Identification of new intrinsic proteins in Arabidopsis plasma membrane proteome. DOI: 10.1074/mcp.M400001-MCP200 ; PMID: 15060130
- The hydrophobic proteome of mitochondrial membranes from Arabidopsis cell suspensions. DOI: 10.1016/j.phytochem.2004.03.028 ; PMID: 15276431
- The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. DOI: 10.1105/tpc.104.027078 ; PMID: 15539469
- Arabidopsis cell wall proteome defined using multidimensional protein identification technology. DOI: 10.1002/pmic.200500046 ; PMID: 16287169
- A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. DOI: 10.1074/mcp.M600250-MCP200 ; PMID: 17151019
- Mitochondrial type-I prohibitins of Arabidopsis thaliana are required for supporting proficient meristem development. DOI: 10.1111/j.1365-313X.2007.03276.x ; PMID: 17883375
- Resolving and identifying protein components of plant mitochondrial respiratory complexes using three dimensions of gel electrophoresis. DOI: 10.1021/pr700595p ; PMID: 18189341
- The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. DOI: 10.1105/tpc.104.027078 ; PMID: 15539469
- A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. DOI: 10.1074/mcp.M600250-MCP200 ; PMID: 17151019
- Mitochondrial type-I prohibitins of Arabidopsis thaliana are required for supporting proficient meristem development. DOI: 10.1111/j.1365-313X.2007.03276.x ; PMID: 17883375
Gene Resources
- UniProt: A0A178VIY4
- EMBL: CACRSJ010000106, CACSHJ010000089, LUHQ01000003
- AlphaFoldDB: A0A178VIY4
- EnsemblPlants: AT3G27280.1, AT3G27280.2
- Gramene: AT3G27280.1, AT3G27280.2
- KEGG: ath:AT3G27280
- Orthologous matrix: LQTPHIY
- ExpressionAtlas: AT3G27280
- InterPro: IPR000163, IPR001107, IPR036013
- PANTHER: PTHR23222, PTHR23222:SF0
- SUPFAM: SSF117892
- Gene3D: 3.30.479.30
- OrthoDB: A0A178VIY4
- SWISS-MODEL: A0A178VIY4
- Conserved Domain Database: cd03401
Homologs
- Brassica napus BnaC06G0168100ZS, BnaC04G0407800ZS, BnaA04G0120300ZS, BnaA07G0174900ZS
- Brassica oleracea Bo6g064740, Bo4g140480
- Brassica rapa Bra025548, Bra028475
- Manihot esculenta MANES_17G107000
- Nicotiana attenuata A4A49_22623
- Populus trichocarpa POPTR_001G335700v3, POPTR_017G065800v3
- Prunus avium Pav_sc0001240.1_g050.1.mk
- Prunus persica PRUPE_3G300700
- Vitis vinifera VIT_14s0171g00430
Sequences
cDNA Sequence
- >AT3G27280.2
TTTCATAAACCCTAACAAACCCCTAAATCTTTCCTTTCTCAATTCTCTCCTTCGAAGCTTTTTTCTTGTGAGGTCAGAAAAGAAAATGGGAAGTCAACAAGTAGCGATTTCGTTTCTGACGAACTTGGCGAAGGCGGCGTTTGGGTTAGGTGTGGCGGCGACGGCACTAAACTCGTCGCTCTACACTGTTGATGGTGGCGAGAGAGCTGTTTTGTTCGATCGATTCAGGGGAGTGTTGGATCAGACCGTCGGCGAAGGGACTCATTTCTTGATCCCGTATCTCCAGACGCCGCACATATACGATATTCGTACGAAACCTCACACTTTCTCCTCCAAATCTGGTACTAAGGATCTTCAGATGGTTAATCTCACCCTTCGTGTTCTCTTTCGCCCTGAGGTTTCGCGTCTCCCGTACATTTTCCAAACATTGGGTCTTGAATACGATGAGAAGGTTCTTCCATCGATTGGAAATGAGGTCTTGAAAGCTGTGGTTGCTAATTTCAATGCTGATCAGCTCCTCACTGAGCGTCCTCAAGTATCAGCACTTGTTCGTGATGCTCTTATCAAGCGTGCCAGGGAATTTAACATTGAGCTCGACGACATAGCCATTACTCACTTATCGTACGGTGCTGAGTTCTCGAGGGCAGTGGAGGCGAAGCAAGTGGCTCAGCAGGAAGCTGAAAGGTCAAAGTTTGTGGTGATGAAGGCTGATCAAGAGAGGAGAGCTGCGGTTATAAGAGCAGAAGGTGAGAGTGAAGCTGCTCAGTTGATATCAGATGCAACAGCTAAAGCAGGAATGGGACTAATTGAGCTTAGGAGGATTGAAGCTTCAAGGGAGGTTGCGGCTACTCTGGCTAGGTCTCCGAACGTGGCTTACTTACCTGGTGGACAAAGCATGCTCTTTAATCTGAACCCTGGTCGTTGAGCTATAACATTGGTATGCTCTTTTACTTCTTTGAATAATGAATGAAAAATGGATTTGGACTTAAGATTCCCATTTAAAGGCATTAAGGTTATTCGGTTTGGTTGAACTAAGAGTGGTTATGGTTTGGTATAAACTGTTTGGTTTGATAGTAGAGTATGGTTTAGGTTTGTGGAATGGTGTGGTTTACTTGTTTGGCCTTGTTGTATTTGCAGGTGGGAAGAGGAGCTTCAGTGGAGACAAAACGACGGAGCTGTGAAGTTTATTAACGTTGATGCTCTTTTATTTCTGATGAACACGATGTGAAAAAAGATAATTGTTTTGAGCCGTTCTATCTTTTCTGACTCTAGAAGTAAAGACTATGCCATTGTTG - >AT3G27280.1
TTTCATAAACCCTAACAAACCCCTAAATCTTTCCTTTCTCAATTCTCTCCTTCGAAGCTTTTTTCTTGTGAGGTCAGAAAAGAAAATGGGAAGTCAACAAGTAGCGATTTCGTTTCTGACGAACTTGGCGAAGGCGGCGTTTGGGTTAGGTGTGGCGGCGACGGCACTAAACTCGTCGCTCTACACTGTTGATGGTGGCGAGAGAGCTGTTTTGTTCGATCGATTCAGGGGAGTGTTGGATCAGACCGTCGGCGAAGGGACTCATTTCTTGATCCCGTATCTCCAGACGCCGCACATATACGATATTCGTACGAAACCTCACACTTTCTCCTCCAAATCTGGTACTAAGGATCTTCAGATGGTTAATCTCACCCTTCGTGTTCTCTTTCGCCCTGAGGTTTCGCGTCTCCCGTACATTTTCCAAACATTGGGTCTTGAATACGATGAGAAGGTTCTTCCATCGATTGGAAATGAGGTCTTGAAAGCTGTGGTTGCTAATTTCAATGCTGATCAGCTCCTCACTGAGCGTCCTCAAGTATCAGCACTTGTTCGTGATGCTCTTATCAAGCGTGCCAGGGAATTTAACATTGAGCTCGACGACATAGCCATTACTCACTTATCGTACGGTGCTGAGTTCTCGAGGGCAGTGGAGGCGAAGCAAGTGGCTCAGCAGGAAGCTGAAAGGTCAAAGTTTGTGGTGATGAAGGCTGATCAAGAGAGGAGAGCTGCGGTTATAAGAGCAGAAGGTGAGAGTGAAGCTGCTCAGTTGATATCAGATGCAACAGCTAAAGCAGGAATGGGACTAATTGAGCTTAGGAGGATTGAAGCTTCAAGGGAGGTTGCGGCTACTCTGGCTAGGTCTCCGAACGTGGCTTACTTACCTGGTGGACAAAGCATGCTCTTTAATCTGAACCCTGGTCGTTGAGCTATAACATTGGTATGCTCTTTTACTTCTTTGAATAATGAATGAAAAATGGATTTGGACTTAAGATTCCCATTTAAAGGCATTAAGGTTATTCGGTTTGGTTGAACTAAGAGTGGTTATGGTTTGGTATAAACTGTTTGGTTTGATAGTAGAGTATGGTTTAGGTTTGTGGAATGGTGTGGTTTACTTGTTTGGCCTTGTTGTATTTGCAGGTGGGAAGAGGAGCTTCAGTGGAGACAAAACGACGGAGCTGTGAAGTTTATTAACGTTGATGCTCTTTTATTTCTGATGAACACGATGTGAAAAAAGATAATTGTTTTGAGCCGTTCTATCTTTTCTGACTCTAGAAGTAAAGACTATGCCATTGTTG
CDS Sequence
- >AT3G27280.2
ATGGGAAGTCAACAAGTAGCGATTTCGTTTCTGACGAACTTGGCGAAGGCGGCGTTTGGGTTAGGTGTGGCGGCGACGGCACTAAACTCGTCGCTCTACACTGTTGATGGTGGCGAGAGAGCTGTTTTGTTCGATCGATTCAGGGGAGTGTTGGATCAGACCGTCGGCGAAGGGACTCATTTCTTGATCCCGTATCTCCAGACGCCGCACATATACGATATTCGTACGAAACCTCACACTTTCTCCTCCAAATCTGGTACTAAGGATCTTCAGATGGTTAATCTCACCCTTCGTGTTCTCTTTCGCCCTGAGGTTTCGCGTCTCCCGTACATTTTCCAAACATTGGGTCTTGAATACGATGAGAAGGTTCTTCCATCGATTGGAAATGAGGTCTTGAAAGCTGTGGTTGCTAATTTCAATGCTGATCAGCTCCTCACTGAGCGTCCTCAAGTATCAGCACTTGTTCGTGATGCTCTTATCAAGCGTGCCAGGGAATTTAACATTGAGCTCGACGACATAGCCATTACTCACTTATCGTACGGTGCTGAGTTCTCGAGGGCAGTGGAGGCGAAGCAAGTGGCTCAGCAGGAAGCTGAAAGGTCAAAGTTTGTGGTGATGAAGGCTGATCAAGAGAGGAGAGCTGCGGTTATAAGAGCAGAAGGTGAGAGTGAAGCTGCTCAGTTGATATCAGATGCAACAGCTAAAGCAGGAATGGGACTAATTGAGCTTAGGAGGATTGAAGCTTCAAGGGAGGTTGCGGCTACTCTGGCTAGGTCTCCGAACGTGGCTTACTTACCTGGTGGACAAAGCATGCTCTTTAATCTGAACCCTGGTCGTTGA - >AT3G27280.1
ATGGGAAGTCAACAAGTAGCGATTTCGTTTCTGACGAACTTGGCGAAGGCGGCGTTTGGGTTAGGTGTGGCGGCGACGGCACTAAACTCGTCGCTCTACACTGTTGATGGTGGCGAGAGAGCTGTTTTGTTCGATCGATTCAGGGGAGTGTTGGATCAGACCGTCGGCGAAGGGACTCATTTCTTGATCCCGTATCTCCAGACGCCGCACATATACGATATTCGTACGAAACCTCACACTTTCTCCTCCAAATCTGGTACTAAGGATCTTCAGATGGTTAATCTCACCCTTCGTGTTCTCTTTCGCCCTGAGGTTTCGCGTCTCCCGTACATTTTCCAAACATTGGGTCTTGAATACGATGAGAAGGTTCTTCCATCGATTGGAAATGAGGTCTTGAAAGCTGTGGTTGCTAATTTCAATGCTGATCAGCTCCTCACTGAGCGTCCTCAAGTATCAGCACTTGTTCGTGATGCTCTTATCAAGCGTGCCAGGGAATTTAACATTGAGCTCGACGACATAGCCATTACTCACTTATCGTACGGTGCTGAGTTCTCGAGGGCAGTGGAGGCGAAGCAAGTGGCTCAGCAGGAAGCTGAAAGGTCAAAGTTTGTGGTGATGAAGGCTGATCAAGAGAGGAGAGCTGCGGTTATAAGAGCAGAAGGTGAGAGTGAAGCTGCTCAGTTGATATCAGATGCAACAGCTAAAGCAGGAATGGGACTAATTGAGCTTAGGAGGATTGAAGCTTCAAGGGAGGTTGCGGCTACTCTGGCTAGGTCTCCGAACGTGGCTTACTTACCTGGTGGACAAAGCATGCTCTTTAATCTGAACCCTGGTCGTTGA
Protein Sequence
- >AT3G27280.2
MGSQQVAISFLTNLAKAAFGLGVAATALNSSLYTVDGGERAVLFDRFRGVLDQTVGEGTHFLIPYLQTPHIYDIRTKPHTFSSKSGTKDLQMVNLTLRVLFRPEVSRLPYIFQTLGLEYDEKVLPSIGNEVLKAVVANFNADQLLTERPQVSALVRDALIKRAREFNIELDDIAITHLSYGAEFSRAVEAKQVAQQEAERSKFVVMKADQERRAAVIRAEGESEAAQLISDATAKAGMGLIELRRIEASREVAATLARSPNVAYLPGGQSMLFNLNPGR - >AT3G27280.1
MGSQQVAISFLTNLAKAAFGLGVAATALNSSLYTVDGGERAVLFDRFRGVLDQTVGEGTHFLIPYLQTPHIYDIRTKPHTFSSKSGTKDLQMVNLTLRVLFRPEVSRLPYIFQTLGLEYDEKVLPSIGNEVLKAVVANFNADQLLTERPQVSALVRDALIKRAREFNIELDDIAITHLSYGAEFSRAVEAKQVAQQEAERSKFVVMKADQERRAAVIRAEGESEAAQLISDATAKAGMGLIELRRIEASREVAATLARSPNVAYLPGGQSMLFNLNPGR