Information report for AT3G27240
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
- GO:0000325 — located in — plant-type vacuole
- GO:0006122 — involved in — mitochondrial electron transport, ubiquinol to cytochrome c
- GO:0005750 — part of — mitochondrial respiratory chain complex III
- GO:0005773 — located in — vacuole
- GO:0005739 — located in — mitochondrion
- GO:0009055 — enables — electron transfer activity
- GO:0020037 — enables — heme binding
- GO:0005829 — located in — cytosol
Functional Keywords
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , pollen tube cell , pollen , guard cell
Literature and News
- New insights into the respiratory chain of plant mitochondria. Supercomplexes and a unique composition of complex II. DOI: 10.1104/pp.103.024620 ; PMID: 12970493
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- Isolation of intact vacuoles and proteomic analysis of tonoplast from suspension-cultured cells of Arabidopsis thaliana. DOI: 10.1093/pcp/pch099 ; PMID: 15215502
- Differential expression of the Arabidopsis cytochrome c genes Cytc-1 and Cytc-2. and meristem-specific expression of the Cytc-1 gene. DOI: 10.1104/pp.105.065920 ; PMID: 16113211
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- Transcriptional coordination of the biogenesis of the oxidative phosphorylation machinery in plants. DOI: 10.1111/j.1365-313X.2007.03121.x ; PMID: 17561924
- Novel tonoplast transporters identified using a proteomic approach with vacuoles isolated from cauliflower buds. DOI: 10.1104/pp.107.096917 ; PMID: 17660356
- Resolving and identifying protein components of plant mitochondrial respiratory complexes using three dimensions of gel electrophoresis. DOI: 10.1021/pr700595p ; PMID: 18189341
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Evidence for interactions between the mitochondrial import apparatus and respiratory chain complexes via Tim21-like proteins in Arabidopsis. DOI: 10.3389/fpls.2014.00082 ; PMID: 24653731
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- Isolation of intact vacuoles and proteomic analysis of tonoplast from suspension-cultured cells of Arabidopsis thaliana. DOI: 10.1093/pcp/pch099 ; PMID: 15215502
- The hydrophobic proteome of mitochondrial membranes from Arabidopsis cell suspensions. DOI: 10.1016/j.phytochem.2004.03.028 ; PMID: 15276431
- A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. DOI: 10.1074/mcp.M600250-MCP200 ; PMID: 17151019
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- Resolving and identifying protein components of plant mitochondrial respiratory complexes using three dimensions of gel electrophoresis. DOI: 10.1021/pr700595p ; PMID: 18189341
Gene Resources
- UniProt: A0A178VJH9
- EMBL: CACRSJ010000106, CACSHJ010000089, LUHQ01000003
- AlphaFoldDB: A0A178VJH9
- EnsemblPlants: AT3G27240.1
- Gramene: AT3G27240.1
- KEGG: ath:AT3G27240
- Orthologous matrix: WMDESIM
- ExpressionAtlas: AT3G27240
- InterPro: IPR002326, IPR009056, IPR021157
- PANTHER: PTHR10266, PTHR10266:SF3
- SUPFAM: SSF46626, SSF81496
- PROSITE: PS51007
- Gene3D: 1.10.760.10, 1.20.5.100
- OrthoDB: A0A178VJH9
- SWISS-MODEL: A0A178VJH9
Sequences
cDNA Sequence
- >AT3G27240.1
GTACGTTGTTGGCCCATTAAGGCCCAAATAAGTAAAACTGTGGTCGTGTGTCTAGCAGCCGCTGTGTCATCGTGGAACTCCCATTTTCTCTCTTTTACTTGTTCGTTCCCAAACTCTTCTCCCTCGATCGTCTCCGTCGCCGATCTCGTTTCTTCATTTTCCGCGTGTTGATTGGTACAAAGGTTTAATCAAATGGTTGGAGGAGGAGTTATCCAGCAAATTCTTAGGAGGAAGCTTCACTCCCAATCACTTGCAACTCCGGTTTTGTCTTGGTTTTCTTCGAAGAAAGCTCATGAGGATGCTGGTTCTTCTGGTGTAAGAGCACTTGCCTTGTTGGGTGCTGGTGTTACAGGACTGTTGAGTTTTTCTACAGTAGCATCTGCTGATGAGGCTGAACATGGATTGGAGAGTCCAGAGTACCCTTGGCCTCATGATGGCATTCTTAGCTCATATGACCATGCTTCGATCCGTCGTGGGCATCAAGTTTATCAGCAAGTCTGTGCATCATGCCATTCAATGTCTCTGATCTCATACCGAGACTTGGTGGGTGTCGCCTACACAGAGGAAGAGGCAAAGGCAATGGCAGCTGAAATCGAGGTAGTAGATGGACCTAATGATGAGGGTGAGATGTTCACCCGCCCTGGTAAACTCAGTGACCGGTTTCCTCAGCCATATGCAAATGAATCAGCTGCAAGGTTTGCTAATGGTGGAGCGTATCCTCCTGATCTAAGTCTTATAACTAAGGCACGTCACAATGGTCCAAACTATGTCTTTGCGCTTCTGACTGGTTACCGTGATCCCCCTGCTGGCATATCGATTAGAGAGGGGTTACACTACAATCCTTATTTCCCTGGGGGAGCAATTGCTATGCCGAAAATGCTCAATGATGAAGCTGTTGAGTATGAAGATGGTGTCCCCGCCACAGAGGCACAGATGGGTAAAGATATTGTATCATTCTTGGCCTGGGCAGCTGAACCAGAAATGGAAGAGAGGAAACTGATGGGTTTCAAATGGATATTCCTACTCTCTCTCGCTCTTCTCCAAGCTGCTTACTACAGGCGACTAAAATGGTCGGTTCTCAAGTCCCGCAAGCTGGTTCTTGACGTGGTTAACTAAAGCGCCGCTGAAAAGCTTTTGCATTGGCCTGGCCACACACAGTCGTATTTTCAACAAAGGATGTTAAATAGAGAAGAGCCTTTCTCTGGGTAATAACGTATCATCATTTTTATGTGTCATAAAAATCTTTGATGAGACCAGTTCTCACCTGAAGGTGAAAAGACCTCATCGTTCTTCTTTTTCCTTCGATTATTACTAGAGAGTTTTATGAGGATAATCACGAAAACTTGTTTTTTTCGCCTCATAATAATCACACATGATTTTGAGATTATATCATTTGTTATGTTTTTCCTCTTGTCTCAATAAAAAATAACTTTGTACTCTGATTTTGTTGTCTATTTTCGGCATTTCTTGCATCTGGCTTTGGTTGCATGAGGAGAATTTATTTCAGGTATAACAAAAACACAATTAATG
CDS Sequence
- >AT3G27240.1
ATGGTTGGAGGAGGAGTTATCCAGCAAATTCTTAGGAGGAAGCTTCACTCCCAATCACTTGCAACTCCGGTTTTGTCTTGGTTTTCTTCGAAGAAAGCTCATGAGGATGCTGGTTCTTCTGGTGTAAGAGCACTTGCCTTGTTGGGTGCTGGTGTTACAGGACTGTTGAGTTTTTCTACAGTAGCATCTGCTGATGAGGCTGAACATGGATTGGAGAGTCCAGAGTACCCTTGGCCTCATGATGGCATTCTTAGCTCATATGACCATGCTTCGATCCGTCGTGGGCATCAAGTTTATCAGCAAGTCTGTGCATCATGCCATTCAATGTCTCTGATCTCATACCGAGACTTGGTGGGTGTCGCCTACACAGAGGAAGAGGCAAAGGCAATGGCAGCTGAAATCGAGGTAGTAGATGGACCTAATGATGAGGGTGAGATGTTCACCCGCCCTGGTAAACTCAGTGACCGGTTTCCTCAGCCATATGCAAATGAATCAGCTGCAAGGTTTGCTAATGGTGGAGCGTATCCTCCTGATCTAAGTCTTATAACTAAGGCACGTCACAATGGTCCAAACTATGTCTTTGCGCTTCTGACTGGTTACCGTGATCCCCCTGCTGGCATATCGATTAGAGAGGGGTTACACTACAATCCTTATTTCCCTGGGGGAGCAATTGCTATGCCGAAAATGCTCAATGATGAAGCTGTTGAGTATGAAGATGGTGTCCCCGCCACAGAGGCACAGATGGGTAAAGATATTGTATCATTCTTGGCCTGGGCAGCTGAACCAGAAATGGAAGAGAGGAAACTGATGGGTTTCAAATGGATATTCCTACTCTCTCTCGCTCTTCTCCAAGCTGCTTACTACAGGCGACTAAAATGGTCGGTTCTCAAGTCCCGCAAGCTGGTTCTTGACGTGGTTAACTAA
Protein Sequence
- >AT3G27240.1
MVGGGVIQQILRRKLHSQSLATPVLSWFSSKKAHEDAGSSGVRALALLGAGVTGLLSFSTVASADEAEHGLESPEYPWPHDGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEEAKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYANESAARFANGGAYPPDLSLITKARHNGPNYVFALLTGYRDPPAGISIREGLHYNPYFPGGAIAMPKMLNDEAVEYEDGVPATEAQMGKDIVSFLAWAAEPEMEERKLMGFKWIFLLSLALLQAAYYRRLKWSVLKSRKLVLDVVN