Gene Details:

• Gene ID: AT3G27220
• Gene Symbol: HUP6
• Gene Name: HYPOXIA RESPONSE UNKNOWN PROTEIN 6
• Description: Galactose oxidase/kelch repeat superfamily protein;(source:Araport11)
• TAIR Accession: locus:2086528
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT3G27220.1

Plant Ontology Annotations:

• PO:0000037  — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
• PO:0009009  — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
• PO:0009025  — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
• PO:0009029  — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
• PO:0009031  — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
• PO:0009046  — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
• PO:0009052  — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
• PO:0020100  — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
• PO:0025022  — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
• PO:0025281  — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)

Gene Ontology:

• GO:0005794  — located in — Golgi apparatus
• GO:0005737  — located in — cytoplasm
• GO:0005797  — located in — Golgi medial cisterna
• GO:0009061  — acts upstream of or within — anaerobic respiration
• GO:0071456  — acts upstream of or within — cellular response to hypoxia
• GO:0005802  — located in — trans-Golgi network
• GO:0005768  — located in — endosome

Germplasm Phenotype:

• SALK_047199  — Seedlings screened in bulk via high throughput methods for responses to various stressors. Results are in comparison to Col-0.heat:ND,cold:ND,oxidative stress:ND,osmotic stress:ND,salt stress:ND,ABA:ND,hypoxia:decreased.

Function-related keywords:

• shoot axis apex ,  root ,  plant embryo ,  vascular leaf ,  stamen ,  sepal ,  flower ,  inflorescence flower pedicel ,  hypocotyl ,  collective leaf structure ,  pollen ,  pollen

Literature:

• A genome-wide analysis of the effects of sucrose on gene expression in Arabidopsis seedlings under anoxia.   DOI:  10.1104/pp.104.057299 ;  PMID:  15734908
• The use of microarrays to study the anaerobic response in Arabidopsis.   DOI:  10.1093/aob/mci218 ;  PMID:  16033780
• Functional genomic analysis of the AUXIN/INDOLE-3-ACETIC ACID gene family members in Arabidopsis thaliana.   DOI:  10.1105/tpc.105.036723 ;  PMID:  16284307
• Mapping the Arabidopsis organelle proteome.   DOI:  10.1073/pnas.0506958103 ;  PMID:  16618929
• Cross-kingdom comparison of transcriptomic adjustments to low-oxygen stress highlights conserved and plant-specific responses.   DOI:  10.1104/pp.109.151845 ;  PMID:  20097791
• Linking genes of unknown function with abiotic stress responses by high-throughput phenotype screening.   DOI:  10.1111/ppl.12013 ;  PMID:  23517122
• Label-free protein quantification for plant Golgi protein localization and abundance.   DOI:  10.1104/pp.114.245589 ;  PMID:  25122472
• Integrative Analysis from the Epigenome to Translatome Uncovers Patterns of Dominant Nuclear Regulation during Transient Stress.   DOI:  10.1105/tpc.19.00463 ;  PMID:  31519798
• New function of Hypoxia-responsive unknown protein in enhanced resistance to biotic stress.   DOI:  10.1080/15592324.2020.1868131 ;  PMID:  33369516
• Mapping the Arabidopsis organelle proteome.   DOI:  10.1073/pnas.0506958103 ;  PMID:  16618929

Sequences: