Information report for AT3G27190
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0004849 — enables — uridine kinase activity
- GO:2001006 — acts upstream of or within — regulation of cellulose biosynthetic process
- GO:0044211 — involved in — CTP salvage
- GO:0005524 — enables — ATP binding
- GO:0006207 — acts upstream of or within — de novo pyrimidine nucleobase biosynthetic process
- GO:0009507 — located in — chloroplast
- GO:0044206 — involved in — UMP salvage
- GO:1901141 — acts upstream of or within — regulation of lignin biosynthetic process
- GO:0005737 — is active in — cytoplasm
- GO:2000904 — acts upstream of or within — regulation of starch metabolic process
- GO:0009507 — is active in — chloroplast
- GO:0044206 — acts upstream of or within — UMP salvage
Functional Keywords
Literature and News
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Uracil salvage is necessary for early Arabidopsis development. DOI: 10.1111/j.1365-313X.2009.03963.x ; PMID: 19563437
- Plastid uridine salvage activity is required for photoassimilate allocation and partitioning in Arabidopsis. DOI: 10.1105/tpc.111.085829 ; PMID: 21828290
- Pyrimidine Salvage: Physiological Functions and Interaction with Chloroplast Biogenesis. DOI: 10.1104/pp.19.00329 ; PMID: 31101721
- A Kinase and a Glycosylase Catabolize Pseudouridine in the Peroxisome to Prevent Toxic Pseudouridine Monophosphate Accumulation. DOI: 10.1105/tpc.19.00639 ; PMID: 31907295
Gene Resources
- UniProt: A0A178VKR8
- EMBL: CACRSJ010000106, CACSHJ010000089, LR881468
- AlphaFoldDB: A0A178VKR8
- EnsemblPlants: AT3G27190.1
- Gramene: AT3G27190.1
- KEGG: ath:AT3G27190
- Orthologous matrix: DQCLNEE
- ExpressionAtlas: AT3G27190
- InterPro: IPR000764, IPR000836, IPR006083
- PANTHER: PTHR10285
- SUPFAM: SSF52540, SSF53271
- Gene3D: 3.40.50.2020, 3.40.50.300
- OrthoDB: A0A178VKR8
- SWISS-MODEL: A0A178VKR8
- Conserved Domain Database: cd02023, cd06223
Homologs
- Brachypodium distachyon Bradi5g05077
- Cucumis melo MELO3C018345.2
- Juglans regia Jr16_13360
- Musa acuminata Ma07_g25020
- Oryza sativa OsPrk
- Ricinus communis 30174.t000441
- Setaria italica Seita.7G028200
- Setaria viridis SEVIR_7G012500v2
- Triticum aestivum Traes_2DL_82B121157
Sequences
cDNA Sequence
- >AT3G27190.1
ATTTTAAAAAAGACGGAGGGAGCGAGAGAGAGAGAGGACAAGTGGGTTGCTGAATTGTGCAGAAATCGTCGTCACTGATCACTTCCGATTCCTTTTTTTTCTCCTTAAATCGCAATTTTCACTCTCCTTTACCTTCGCCGAGAAACTCAATGCCAGAAGATTCAACGGCGATTGACTATGTCATGGAGAAGGCATCGGGGCCTCACTTCTCCGGTCTTCGCCTTGACGGTCTTCTTTCTTCTCCGTCGAAATCCTCCGTCTCTTCTCCTTCTCACTTCCGTTTGAGTAATTCTTCTTTTTCGGCTACCGACGATCCCGCCGCTCCTCATCAGCCCTTCGTTATCGGAGTTACTGGTGGTACAGCTTCTGGTAAGACGACGGTATGTGACATGATAATCCAGCAACTTCATGATCATCGCATTGTTTTAGTTAACCAGGATTCGTTTTACCGTGGTTTGACATCTGAAGAACTTGAGCATGTACAAGAATACAATTTTGATCATCCTGATGCCTTTGACACTGAGCAGCTTTTGCATTGCGTTGACATACTCAAGAGTGGGCAACCCTATCAAATTCCAATTTATGACTTCAAGACCCATCAACGTAAAGTAGATGCTTTTCGCCAGGTCAATGCTTGTGATGTCATCATTTTGGAAGGGATTCTAGTTTTTCATGACTCACGAGTTCGGGACCTAATGAATATGAAGATCTTCGTTGACACAGATGCTGATGTGAGGCTTGCTCGCAGAATCAGGCGTGACACGGTTGAGAGGGGTAGGGATGTTGACTCTGTGCTTGAACAGTATGCAAAGTTTGTGAAGCCTGCGTTTGATGATTTTGTGCTCCCCTCAAAGAAATATGCTGATGTGATCATTCCACGAGGAGGTGACAATCACGTTGCAGTTGATTTGATTGTGCAACATATCCACACAAAACTTGGGCAACATGATCTCTGCAAAATCTACCCAAATGTTTTTGTTATTGAAACAACATTTCAGATAAGAGGCATGCACACTCTCATTCGAGAGAAGGACATATCAAAACATGACTTCGTGTTTTACTCAGATCGCCTCATTCGTTTGGTTGTGGAGCATGGTCTTGGCCATTTGCCTTTCACTGAGAAACAAGTAGTTACTCCGACAGGATCTGTGTATAGCGGTGTTGATTTCTGCAAGAAACTCTGTGGGGTCTCAGTCATTCGAAGTGGTGAAAGCATGGAAAACGCATTGCGCGCATGTTGCAAAGGGATTAAGATAGGGAAGATTCTCATCCATCGTGACGGAGACAATGGAATGCAGCTTATATACGAGAAGCTTCCAAGTGATATCTCCGAGCGTCATGTCCTGCTATTAGATCCTGTTTTAGGCACAGGTAACTCTGCAAATCAGGCGATAGAACTACTCATACAGAAAGGAGTACCTGAAGCCCACATTATATTCCTCAATCTTATCTCAGCGCCAGAAGGAATCCATTGCGTCTGCAAACGGTTCCCAAAGTTGAAGATTGTGACGTCAGAAATCGATCAGTGTCTGAACGAAGAGTTCAGGGTTATACCAGGCTTGGGTGAGTTTGGTGATCGCTACTTTGGTACCGACGAGTAGAAGAAGTACCAAAGTGTTTGTCAATGGTTATTGTGCTTGTGTGTGAATGGAAGTGTTTTACTTTGTCTAAAGAATCTTCACGGGCTTTGTTTTTTTTTAGTTCCCTCTGCTTGGAAGCTTCTCGCTTACTAATTACTAGAATTGAAAACTCATTTCAAGATTCTTGGCTTAAGCAGTTCATATCCGACGACTTTTTCGTCAACAACACTTTTAAGCATCCCTTATTCATGACAACTTTTAAGAACTTTGATAGATTTCATAAATTTTTAATTTTACACTTATTAAAGTCTTTTGTTTAGTAACAAT
CDS Sequence
- >AT3G27190.1
ATGCCAGAAGATTCAACGGCGATTGACTATGTCATGGAGAAGGCATCGGGGCCTCACTTCTCCGGTCTTCGCCTTGACGGTCTTCTTTCTTCTCCGTCGAAATCCTCCGTCTCTTCTCCTTCTCACTTCCGTTTGAGTAATTCTTCTTTTTCGGCTACCGACGATCCCGCCGCTCCTCATCAGCCCTTCGTTATCGGAGTTACTGGTGGTACAGCTTCTGGTAAGACGACGGTATGTGACATGATAATCCAGCAACTTCATGATCATCGCATTGTTTTAGTTAACCAGGATTCGTTTTACCGTGGTTTGACATCTGAAGAACTTGAGCATGTACAAGAATACAATTTTGATCATCCTGATGCCTTTGACACTGAGCAGCTTTTGCATTGCGTTGACATACTCAAGAGTGGGCAACCCTATCAAATTCCAATTTATGACTTCAAGACCCATCAACGTAAAGTAGATGCTTTTCGCCAGGTCAATGCTTGTGATGTCATCATTTTGGAAGGGATTCTAGTTTTTCATGACTCACGAGTTCGGGACCTAATGAATATGAAGATCTTCGTTGACACAGATGCTGATGTGAGGCTTGCTCGCAGAATCAGGCGTGACACGGTTGAGAGGGGTAGGGATGTTGACTCTGTGCTTGAACAGTATGCAAAGTTTGTGAAGCCTGCGTTTGATGATTTTGTGCTCCCCTCAAAGAAATATGCTGATGTGATCATTCCACGAGGAGGTGACAATCACGTTGCAGTTGATTTGATTGTGCAACATATCCACACAAAACTTGGGCAACATGATCTCTGCAAAATCTACCCAAATGTTTTTGTTATTGAAACAACATTTCAGATAAGAGGCATGCACACTCTCATTCGAGAGAAGGACATATCAAAACATGACTTCGTGTTTTACTCAGATCGCCTCATTCGTTTGGTTGTGGAGCATGGTCTTGGCCATTTGCCTTTCACTGAGAAACAAGTAGTTACTCCGACAGGATCTGTGTATAGCGGTGTTGATTTCTGCAAGAAACTCTGTGGGGTCTCAGTCATTCGAAGTGGTGAAAGCATGGAAAACGCATTGCGCGCATGTTGCAAAGGGATTAAGATAGGGAAGATTCTCATCCATCGTGACGGAGACAATGGAATGCAGCTTATATACGAGAAGCTTCCAAGTGATATCTCCGAGCGTCATGTCCTGCTATTAGATCCTGTTTTAGGCACAGGTAACTCTGCAAATCAGGCGATAGAACTACTCATACAGAAAGGAGTACCTGAAGCCCACATTATATTCCTCAATCTTATCTCAGCGCCAGAAGGAATCCATTGCGTCTGCAAACGGTTCCCAAAGTTGAAGATTGTGACGTCAGAAATCGATCAGTGTCTGAACGAAGAGTTCAGGGTTATACCAGGCTTGGGTGAGTTTGGTGATCGCTACTTTGGTACCGACGAGTAG
Protein Sequence
- >AT3G27190.1
MPEDSTAIDYVMEKASGPHFSGLRLDGLLSSPSKSSVSSPSHFRLSNSSFSATDDPAAPHQPFVIGVTGGTASGKTTVCDMIIQQLHDHRIVLVNQDSFYRGLTSEELEHVQEYNFDHPDAFDTEQLLHCVDILKSGQPYQIPIYDFKTHQRKVDAFRQVNACDVIILEGILVFHDSRVRDLMNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAVDLIVQHIHTKLGQHDLCKIYPNVFVIETTFQIRGMHTLIREKDISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSVYSGVDFCKKLCGVSVIRSGESMENALRACCKGIKIGKILIHRDGDNGMQLIYEKLPSDISERHVLLLDPVLGTGNSANQAIELLIQKGVPEAHIIFLNLISAPEGIHCVCKRFPKLKIVTSEIDQCLNEEFRVIPGLGEFGDRYFGTDE