Gene Details:
- Gene ID: AT3G27080
- Gene Symbol: TOM20-3
- Gene Name: translocase of outer membrane 20 kDa subunit 3
- Description: translocase of outer membrane 20 kDa subunit 3;(source:Araport11)
- TAIR Accession: locus:2092045
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
Gene Ontology:
- GO:0015450 — enables — protein-transporting ATPase activity
- GO:0006626 — acts upstream of or within — protein targeting to mitochondrion
- GO:0005741 — located in — mitochondrial outer membrane
- GO:0005744 — part of — TIM23 mitochondrial import inner membrane translocase complex
- GO:0005742 — part of — mitochondrial outer membrane translocase complex
- GO:0005743 — located in — mitochondrial inner membrane
- GO:0005829 — located in — cytosol
- GO:0061617 — located in — MICOS complex
- GO:0005739 — located in — mitochondrion
- GO:0045040 — involved in — protein insertion into mitochondrial outer membrane
- GO:0005515 — enables — protein binding
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , pollen tube cell , pollen
Literature:
- Purification and characterization of the preprotein translocase of the outer mitochondrial membrane from Arabidopsis. Identification of multiple forms of TOM20. DOI: 10.1104/pp.125.2.943 ; PMID: 11161051
- Nuclear genes that encode mitochondrial proteins for DNA and RNA metabolism are clustered in the Arabidopsis genome. DOI: 10.1105/tpc.010009 ; PMID: 12837951
- A transcriptomic and proteomic characterization of the Arabidopsis mitochondrial protein import apparatus and its response to mitochondrial dysfunction. DOI: 10.1104/pp.103.033910 ; PMID: 14730085
- The Arabidopsis thaliana transcriptome in response to Agrobacterium tumefaciens. DOI: 10.1094/MPMI-19-0665 ; PMID: 16776300
- Functional definition of outer membrane proteins involved in preprotein import into mitochondria. DOI: 10.1105/tpc.107.050534 ; PMID: 17981999
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Plant-Specific Preprotein and Amino Acid Transporter Proteins Are Required for tRNA Import into Mitochondria. DOI: 10.1104/pp.16.01519 ; PMID: 27789739
- Arabidopsis DGD1 SUPPRESSOR1 Is a Subunit of the Mitochondrial Contact Site and Cristae Organizing System and Affects Mitochondrial Biogenesis. DOI: 10.1105/tpc.18.00885 ; PMID: 31118221
- Purification and characterization of the preprotein translocase of the outer mitochondrial membrane from Arabidopsis. Identification of multiple forms of TOM20. DOI: 10.1104/pp.125.2.943 ; PMID: 11161051
- A transcriptomic and proteomic characterization of the Arabidopsis mitochondrial protein import apparatus and its response to mitochondrial dysfunction. DOI: 10.1104/pp.103.033910 ; PMID: 14730085
- Functional definition of outer membrane proteins involved in preprotein import into mitochondria. DOI: 10.1105/tpc.107.050534 ; PMID: 17981999
Sequences:
cDNA Sequence
- >AT3G27080.1
ATGAAATTAAGACGTTGGGCTTTTTACAAACTAATACAAGTAACATAATAGGCCCATTGTAAGCCCACTAAAAAAACGCTGCGTTTCATTGCGCCGGTATCTGATTTTTATCTGTGCCGAGGTCTGAGAGAAGAAAAGCCAAAAGTTTTGTACGAAAGAAGAAAAGCTTTGAGAAGCCATGGATACGGAAACTGAGTTCGATAGGATACTATTGTTCGAACAAATTCGTCAAGACGCCGAAAATACCTACAAGTCAAATCCTTTAGATGCCGATAATCTGACTAGATGGGGAGGAGTTTTACTCGAGTTATCTCAGTTTCATAGCATCTCAGATGCAAAGCAAATGATTCAAGAGGCCATCACAAAGTTTGAAGAGGCATTGTTGATTGACCCAAAGAAAGATGAAGCGGTTTGGTGTATTGGGAATGCATACACTTCATTTGCGTTTCTGACTCCTGACGAGACTGAAGCTAAACATAACTTTGACTTAGCTACTCAGTTCTTTCAACAAGCTGTGGATGAGCAACCAGATAATACACACTACCTGAAATCACTCGAAATGACGGCCAAGGCTCCACAGCTGCACGCAGAAGCTTACAAACAAGGCTTAGGCTCACAACCAATGGGTCGCGTTGAAGCTCCAGCACCGCCGAGCTCAAAGGCAGTGAAGAATAAGAAAAGTAGTGATGCCAAGTATGATGCTATGGGTTGGGTGATTCTAGCCATTGGTGTTGTTGCTTGGATCAGTTTCGCGAAAGCTAATGTGCCTGTCTCTCCTCCTCGTTAAGTAGACTCGTTAGGAGACTTTGATGAAGTTTTTCAATTTTTGAGGTTTTGACAGTTGGAGCTTGTTGTGTAAGATTTTTAGTTGTACTACGAGTACTTTATTATTGAAAGAAGATAAATGTCTTTTTACTAGAGCTTGTTCTTCAGCGTTCATGTTAAACAACACTAACTCCACTAGTCCTATGAATATTAGTATAATCCATCTCATGCTTGTAGTAAGTACTATTAGTTTGTTCAATTTGACTATTAGTTTTTGACAAAGTTTC
CDS Sequence
- >AT3G27080.1
ATGGATACGGAAACTGAGTTCGATAGGATACTATTGTTCGAACAAATTCGTCAAGACGCCGAAAATACCTACAAGTCAAATCCTTTAGATGCCGATAATCTGACTAGATGGGGAGGAGTTTTACTCGAGTTATCTCAGTTTCATAGCATCTCAGATGCAAAGCAAATGATTCAAGAGGCCATCACAAAGTTTGAAGAGGCATTGTTGATTGACCCAAAGAAAGATGAAGCGGTTTGGTGTATTGGGAATGCATACACTTCATTTGCGTTTCTGACTCCTGACGAGACTGAAGCTAAACATAACTTTGACTTAGCTACTCAGTTCTTTCAACAAGCTGTGGATGAGCAACCAGATAATACACACTACCTGAAATCACTCGAAATGACGGCCAAGGCTCCACAGCTGCACGCAGAAGCTTACAAACAAGGCTTAGGCTCACAACCAATGGGTCGCGTTGAAGCTCCAGCACCGCCGAGCTCAAAGGCAGTGAAGAATAAGAAAAGTAGTGATGCCAAGTATGATGCTATGGGTTGGGTGATTCTAGCCATTGGTGTTGTTGCTTGGATCAGTTTCGCGAAAGCTAATGTGCCTGTCTCTCCTCCTCGTTAA
Protein Sequence
- >AT3G27080.1
MDTETEFDRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMTAKAPQLHAEAYKQGLGSQPMGRVEAPAPPSSKAVKNKKSSDAKYDAMGWVILAIGVVAWISFAKANVPVSPPR