Information report for AT3G26740
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
- GO:0009507 — located in — chloroplast
- GO:0098807 — part of — chloroplast thylakoid membrane protein complex
- GO:0005829 — located in — cytosol
- GO:0003674 — enables — molecular_function
- GO:0007623 — involved in — circadian rhythm
Functional Keywords
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , guard cell
Literature and News
- New molecular phenotypes in the dst mutants of Arabidopsis revealed by DNA microarray analysis. DOI: 10.1105/tpc.010295 ; PMID: 11752382
- Identification of unstable transcripts in Arabidopsis by cDNA microarray and specific clock-controlled genes. DOI: 10.1073/pnas.152204099 ; PMID: 12167669
- Toxicity of free proline revealed in an arabidopsis T-DNA-tagged mutant deficient in proline dehydrogenase. DOI: 10.1093/pcp/pcg066 ; PMID: 12773641
- The sfr6 mutant of Arabidopsis is defective in transcriptional activation via CBF/DREB1 and DREB2 and shows sensitivity to osmotic stress. DOI: 10.1046/j.1365-313x.2003.01734.x ; PMID: 12753580
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Reversible histone acetylation and deacetylation mediate genome-wide, promoter-dependent and locus-specific changes in gene expression during plant development. DOI: 10.1534/genetics.104.033142 ; PMID: 15371352
- Circadian control of messenger RNA stability. Association with a sequence-specific messenger RNA decay pathway. DOI: 10.1104/pp.105.060368 ; PMID: 16055688
- Systemic signalling of environmental cues in Arabidopsis leaves. DOI: 10.1093/jxb/erj033 ; PMID: 16330523
- Rapid transcriptome changes induced by cytosolic Ca2+ transients reveal ABRE-related sequences as Ca2+-responsive cis elements in Arabidopsis. DOI: 10.1105/tpc.106.042713 ; PMID: 16980540
- The CHD3 remodeler PICKLE promotes trimethylation of histone H3 lysine 27. DOI: 10.1074/jbc.M802129200 ; PMID: 18539592
- Adaptation of iCLIP to plants determines the binding landscape of the clock-regulated RNA-binding protein AtGRP7. DOI: 10.1186/s13059-017-1332-x ; PMID: 29084609
- Orchestrated transcription of key pathways in Arabidopsis by the circadian clock. DOI: 10.1126/science.290.5499.2110 ; PMID: 11118138
- Microarray analysis of diurnal and circadian-regulated genes in Arabidopsis. DOI: 10.1105/tpc.13.1.113 ; PMID: 11158533
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: A0A5S9XG25
- EMBL: CACRSJ010000106, CACSHJ010000089, LR881468
- AlphaFoldDB: A0A5S9XG25
- EnsemblPlants: AT3G26740.1
- Gramene: AT3G26740.1
- KEGG: ath:AT3G26740
- Orthologous matrix: EFCERPY
- ExpressionAtlas: AT3G26740
- InterPro: IPR009856
- PANTHER: PTHR36762, PTHR36762:SF2
- OrthoDB: A0A5S9XG25
Homologs
- Brassica napus GSBRNA2T00038023001
- Oryza sativa Lir1;OsLIR1
Sequences
cDNA Sequence
- >AT3G26740.1
CCTCAATAATATCAAAATTTACTTCAATGAGAATAAGATTACAATTTTTTATTTTTTTTTGAACACCAACAAATCTGCTTCTTCTCTGGCTATAAATAAAGCATAAACTGTTCCAAAAACAGAACCAAAAAATATCTAAAATCACTAAACCTATCTTCTTAACCAAAAGATCAATAGATTACAAAAATGCAGGGAGCTCTGTTTATCAAACCAACTATTCTTCTTCCTCTTCCTTCTTCAGTTTCTTCTCCAAAACTCACTTTTCTTCTTCCTCACGCAACCAAAGCTTCAAGACTCTCATCTCTCAGATCAAACAACTCATCATCATCATCATCCTTAACGTCTGACCCTAACACCGTCGACTATAACTCCTCCATCCTTTCTGTTTTTCCAGCTGAAGCATGCGAAGTAATCAGTGGATACGCTTGTTCTGCTGATATTTACCCTGAAGTCAAGCTCGATACAAAGCCCGTCTCACGTCCCGTGGCTTCAGAGCCCGTTGACAGAGAATACGAAGAGTATAACAGCCCCAAAACGGTTTTCCGTGAAGAGGCCTGCGATGATCTTGGAGGAGAATTCTGTGAACCTGACTTTCAAAAAGATGCCAACTAGAAGAAACAAGATTTTATGTCATGTGAATATGTGTTTGTATTTCTACAAGTCTTTGTAACCACTCCTTAATTTATGATATCTAGCTTCACTACTTAATCAAGATTGATGTTATGGATTAGACCCGAGTTCCCAAAGTTAATACTCTCTCTGTTCCAAGTTATTTGATGTTTTGGGTTTTACACAAGAATTAAGAAAAATTAACTTTTATATTTTTAATTATTTTTTTGTTAGTTTAATAAATATTAGTTGAGTATTTATAATAAATGACTATAGATTTGAAAAGAATGTACAAACTAACCTTGAGTCACAGTATCTTGTCGGAAACATGTTGGAGAACACGTGTAATTACGTAAATGTCCTTTGTAACATGTTATTTTTCCGAAATACATGCGATAACATAATATCCTCTTTTTATCTTGTTATTTTCTCTTATTACATAGTATTTGTAAAAAGCAC
CDS Sequence
- >AT3G26740.1
ATGCAGGGAGCTCTGTTTATCAAACCAACTATTCTTCTTCCTCTTCCTTCTTCAGTTTCTTCTCCAAAACTCACTTTTCTTCTTCCTCACGCAACCAAAGCTTCAAGACTCTCATCTCTCAGATCAAACAACTCATCATCATCATCATCCTTAACGTCTGACCCTAACACCGTCGACTATAACTCCTCCATCCTTTCTGTTTTTCCAGCTGAAGCATGCGAAGTAATCAGTGGATACGCTTGTTCTGCTGATATTTACCCTGAAGTCAAGCTCGATACAAAGCCCGTCTCACGTCCCGTGGCTTCAGAGCCCGTTGACAGAGAATACGAAGAGTATAACAGCCCCAAAACGGTTTTCCGTGAAGAGGCCTGCGATGATCTTGGAGGAGAATTCTGTGAACCTGACTTTCAAAAAGATGCCAACTAG
Protein Sequence
- >AT3G26740.1
MQGALFIKPTILLPLPSSVSSPKLTFLLPHATKASRLSSLRSNNSSSSSSLTSDPNTVDYNSSILSVFPAEACEVISGYACSADIYPEVKLDTKPVSRPVASEPVDREYEEYNSPKTVFREEACDDLGGEFCEPDFQKDAN