Information report for AT3G26640
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
Literature and News
- Diverse RNA viruses elicit the expression of common sets of genes in susceptible Arabidopsis thaliana plants. DOI: 10.1046/j.1365-313x.2003.01625.x ; PMID: 12535341
- Two new clock proteins, LWD1 and LWD2, regulate Arabidopsis photoperiodic flowering. DOI: 10.1104/pp.108.124917 ; PMID: 18676661
- LIGHT-REGULATED WD1 and PSEUDO-RESPONSE REGULATOR9 form a positive feedback regulatory loop in the Arabidopsis circadian clock. DOI: 10.1105/tpc.110.081661 ; PMID: 21357491
- Wheels within wheels: new transcriptional feedback loops in the Arabidopsis circadian clock. DOI: 10.12703/P6-2 ; PMID: 24592314
- Screening Arabidopsis mutants in genes useful for phytoremediation. DOI: 10.1016/j.jhazmat.2017.04.021 ; PMID: 28441590
- Plant dual-specificity tyrosine phosphorylation-regulated kinase optimizes light-regulated growth and development in Arabidopsis. DOI: 10.1111/pce.12977 ; PMID: 28437590
- TTG1 proteins regulate circadian activity as well as epidermal cell fate and pigmentation. DOI: 10.1038/s41477-019-0544-3 ; PMID: 31712761
- TRANSPARENT TESTA GLABRA 1 participates in flowering time regulation in Arabidopsis thaliana. DOI: 10.7717/peerj.8303 ; PMID: 31998554
Gene Resources
- UniProt: A0A178V7P7
- EMBL: CACRSJ010000106, CACSHJ010000089, LR881468
- AlphaFoldDB: A0A178V7P7
- EnsemblPlants: AT3G26640.1
- Gramene: AT3G26640.1
- KEGG: ath:AT3G26640
- Orthologous matrix: LDIRMPC
- ExpressionAtlas: AT3G26640
- InterPro: IPR001680, IPR015943, IPR019775
- PANTHER: PTHR19919
- SUPFAM: SSF50978
- PROSITE: PS00678, PS50082, PS50294
- Gene3D: 2.130.10.10
- OrthoDB: A0A178V7P7
- SWISS-MODEL: A0A178V7P7
Homologs
- Brassica napus BnaC08G0503000ZS, BnaA09G0644500ZS
- Brassica rapa Bra026947
- Citrullus lanatus Cla97C05G094170
- Cucumis melo MELO3C014751
- Manihot esculenta MANES_11G072300, MANES_04G096000
- Nicotiana attenuata A4A49_01838
- Populus trichocarpa POPTR_002G220500v3, POPTR_002G214700v3, POPTR_014G140700v3
- Rosa chinensis RchiOBHm_Chr2g0176751
Sequences
cDNA Sequence
- >AT3G26640.1
GTCGTTTTTGTTAGCTAAAAAGAAGAAATAGTAAATATCCATTAGAAGAAGAAGACGAAGCAGAGGAATCTAGGGTTTATGCTACATTGAAGCAAAGATGGTTACGAGCAGCGATCAAATCCAAAATGGTTCTGAAGAGCAATCAAAAAGATCAGAGATTTACACATACGAAGCACCATGGCAGATCTACGCAATGAACTGGAGCATTCGTCGAGACAAGAAGTATCGGCTCGCAATCACAAGCCTCATCGAGCAATATCCGAATCGCGTCGAAATTGTTCAGCTTGATGAATCAAATGGTGAGATTCGTTCAGATCCAAATCTCTGCTTCGAACATCCTTACCCACCAACGAAAACCAGTTTCATACCCGATAAAGAATGTCAAAGACCCGATCTTTTAGCTACTTCTAGTGATTTCCTTCGTTTATGGCGAATCTCTGATGATGAATCTCGTGTTGAGCTTAAGTCTTGTCTTAGTAGTGATAAGAATAGTGAGTTTAGTGGTCCAATCACTTCATTTGATTGGAATGAAGCTGAGCCTAGACGAATTGGTACTTCTAGTATTGATACCACTTGTACTATTTGGGATATAGAGCGTGAAGTTGTTGATACCCAGCTTATTGCTCATGATAAAGAGGTTTATGACATTGCTTGGGGTGGTGTTGGTGTCTTTGCCTCTGTCTCAGAGGATGGTTCCGTTAGAGTGTTTGATCTCCGTGATAAGGAGCATTCGACGATTATCTACGAGAGTGGTGAGCCTAGTACTCCTTTGGTGCGACTTAGTTGGAACAAGCAGGATCCGAGGTATATGGCTACTGTTATCATGGGCAGTGCTAAAATTGTTGTGTTGGATATTCGGTTTCCGGCTCTTCCTGTCGTGGAGCTTCAGCGACATCAGGCTAGTGTCAATGCTATAGCTTGGGCTCCTCATAGCTCTTCCCATATCTGCTCCGCTGGAGATGATTCTCAGGCGTTGATTTGGGATATATCTTCCATGGGACAGCATGTTGAAGGTGGTCTGGATCCGATTCTAGCTTACACAGCCGGCGCTGAGGTTGAGCAGCTTCAGTGGTCATCTTCTCAGCCTGATTGGGTTGCCATTGCCTTCTCTAACAAGCTGCAGATTCTCCGGGTCTGATTATGTTTTACAGATTTCTGTTGGATACTTGGATGTAAAAACTCGTTGCTATTGTTGATTAATGATCTTTTGATCTCTGACTCTAAGCCTCATTGAGTTTCCTTTCATAGTATGGTCTGTGTAGGAACTATGTACCTTCAAAATTGTGAATAACTAGCTTTAGCATTGGATTTGATTAGACGTATGGAAGTTAGTTTTGAACAGAGAGCATGTGACATAACGGGGAACTTGAAGTAGATTATGACTAACACCAGCATTTATGTTTCTCTGCCCTCGAGCTGATGGAGTTGCAGGATTTTGTCTGCCTCACCATCGTATGGAATGTGTAGCTTTCTATGGTAGTTGTTATAAGTTTTGTCTCCATTGTCCATATCACTTTATGGGTATGTAGATTTGTGAAATTAGGCATTTGTAACATCGTACAGATGATGTATTCTTCATTACTTCAATACAGGCATATAGACTCTCTGTCCAACTTAAAAGGCATACAAGGTCTGTGGTTTACCAAAATCAGCTTTACTAAATCCTTTGGCCAATATTCTCTCAGCCAGTCCTAAG
CDS Sequence
- >AT3G26640.1
ATGGTTACGAGCAGCGATCAAATCCAAAATGGTTCTGAAGAGCAATCAAAAAGATCAGAGATTTACACATACGAAGCACCATGGCAGATCTACGCAATGAACTGGAGCATTCGTCGAGACAAGAAGTATCGGCTCGCAATCACAAGCCTCATCGAGCAATATCCGAATCGCGTCGAAATTGTTCAGCTTGATGAATCAAATGGTGAGATTCGTTCAGATCCAAATCTCTGCTTCGAACATCCTTACCCACCAACGAAAACCAGTTTCATACCCGATAAAGAATGTCAAAGACCCGATCTTTTAGCTACTTCTAGTGATTTCCTTCGTTTATGGCGAATCTCTGATGATGAATCTCGTGTTGAGCTTAAGTCTTGTCTTAGTAGTGATAAGAATAGTGAGTTTAGTGGTCCAATCACTTCATTTGATTGGAATGAAGCTGAGCCTAGACGAATTGGTACTTCTAGTATTGATACCACTTGTACTATTTGGGATATAGAGCGTGAAGTTGTTGATACCCAGCTTATTGCTCATGATAAAGAGGTTTATGACATTGCTTGGGGTGGTGTTGGTGTCTTTGCCTCTGTCTCAGAGGATGGTTCCGTTAGAGTGTTTGATCTCCGTGATAAGGAGCATTCGACGATTATCTACGAGAGTGGTGAGCCTAGTACTCCTTTGGTGCGACTTAGTTGGAACAAGCAGGATCCGAGGTATATGGCTACTGTTATCATGGGCAGTGCTAAAATTGTTGTGTTGGATATTCGGTTTCCGGCTCTTCCTGTCGTGGAGCTTCAGCGACATCAGGCTAGTGTCAATGCTATAGCTTGGGCTCCTCATAGCTCTTCCCATATCTGCTCCGCTGGAGATGATTCTCAGGCGTTGATTTGGGATATATCTTCCATGGGACAGCATGTTGAAGGTGGTCTGGATCCGATTCTAGCTTACACAGCCGGCGCTGAGGTTGAGCAGCTTCAGTGGTCATCTTCTCAGCCTGATTGGGTTGCCATTGCCTTCTCTAACAAGCTGCAGATTCTCCGGGTCTGA
Protein Sequence
- >AT3G26640.1
MVTSSDQIQNGSEEQSKRSEIYTYEAPWQIYAMNWSIRRDKKYRLAITSLIEQYPNRVEIVQLDESNGEIRSDPNLCFEHPYPPTKTSFIPDKECQRPDLLATSSDFLRLWRISDDESRVELKSCLSSDKNSEFSGPITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKEVYDIAWGGVGVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMATVIMGSAKIVVLDIRFPALPVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDISSMGQHVEGGLDPILAYTAGAEVEQLQWSSSQPDWVAIAFSNKLQILRV