Information report for AT3G25980
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
Functional Keywords
Literature and News
- Genome-wide gene expression in an Arabidopsis cell suspension. DOI: 10.1023/B:PLAN.0000019059.56489.ca ; PMID: 15010610
- Global analysis of the core cell cycle regulators of Arabidopsis identifies novel genes, reveals multiple and highly specific profiles of expression and provides a coherent model for plant cell cycle control. DOI: 10.1111/j.1365-313X.2004.02319.x ; PMID: 15686519
- The Arabidopsis thaliana homolog of yeast BRE1 has a function in cell cycle regulation during early leaf and root growth. DOI: 10.1105/tpc.106.041319 ; PMID: 17329565
- Spindle assembly checkpoint protein dynamics reveal conserved and unsuspected roles in plant cell division. DOI: 10.1371/journal.pone.0006757 ; PMID: 19710914
- Targeted interactomics reveals a complex core cell cycle machinery in Arabidopsis thaliana. DOI: 10.1038/msb.2010.53 ; PMID: 20706207
- Functional interaction between the Arabidopsis orthologs of spindle assembly checkpoint proteins MAD1 and MAD2 and the nucleoporin NUA. DOI: 10.1007/s11103-012-9903-4 ; PMID: 22457071
- An Arabidopsis tissue-specific RNAi method for studying genes essential to mitosis. DOI: 10.1371/journal.pone.0051388 ; PMID: 23236491
- Three BUB1 and BUBR1/MAD3-related spindle assembly checkpoint proteins are required for accurate mitosis in Arabidopsis. DOI: 10.1111/nph.13073 ; PMID: 25262777
- Endopolyploidization and flowering time are antagonistically regulated by checkpoint component MAD1 and immunity modulator MOS1. DOI: 10.1038/ncomms6628 ; PMID: 25429892
- Retraction. DOI: 10.1111/nph.14225 ; PMID: 27874987
- Roles of MSH2 and MSH6 in cadmium-induced G2/M checkpoint arrest in Arabidopsis roots. DOI: 10.1016/j.chemosphere.2018.03.017 ; PMID: 29533809
Gene Resources
- UniProt: A0A1I9LRJ1
- EMBL: CP002686
- AlphaFoldDB: A0A1I9LRJ1
- EnsemblPlants: AT3G25980.3, AT3G25980.4
- Gramene: AT3G25980.3, AT3G25980.4
- ExpressionAtlas: AT3G25980
- InterPro: IPR003511, IPR036570, IPR045091
- PANTHER: PTHR11842, PTHR11842:SF11
- SUPFAM: SSF56019
- PROSITE: PS50815
- Gene3D: 3.30.900.10
- OrthoDB: A0A1I9LRJ1
- SWISS-MODEL: A0A1I9LRJ1
Sequences
cDNA Sequence
- >AT3G25980.4
ATTTCCGAGGAAGACTAGCCGTTACGCTCTTATTCCTTTTTTTTTCTTTTTCTTTCTTTCCTTCTTTTTAATCCTTCCCTCAAATATCTTTTTTTCCCTTCAAAATCATTAAAACCCTAAGCGACGCTGTTAACACTTGCGAATTCAATTTTCAAAATCACCGATCCTTAGACTCCATGGCGTCCAAAACAGCGGCTGCTAAAGATATCATCACTTTACACGGATCTGCTGCCATCGTCAGCGAATTCTTCTGTACGTATCTTCATTTTTTCTTAGACTCAATTTCAGATATCTTCTTCTCGATTTGATGTTTTTTTTTTCCTTCTTCTTCTTCCTCCAGGTTACGCTGCGAACAGTATATTGTATAATCGTGCAGTTTATCCAGAGGAAAGTTTTGTGAAAGTGAAGAAATATGGACTTCCGATGTTGCTTATTGAAGATGAATCCGTCAAATCTTTCATGTCTAATCTCACTTCTCAGATCTCCGAATGGCTTGAAGCTGGGAAGTTGCAGAGAGTAGTGTTAGTGATTATGAGTAAAGCTACTGGTGAAGTCTTGGAGAGGTGGAATTTTCGTATTGAGACTGATAATGAAGTTGTTGACAAAGGTGTGTCGAGGGAGAAGAGTGATAAGGAGATCATGAGGGAGATTCAAGCTATTATGAGACAGGTTGCTTCAAGTGTTACTTACTTGCCTTGTCTTGATGAAACATGTGTGTTTGATGTATTGGCGTATACGGATACTGATGTGGCTGTTCCATTCACTTGGATCGAGAGCGACCCGAAGTTGATTGCTAATCCACAGATGGTTAAGTTACACGGTTTTGATACCAAGATTCACAAAGTCGACACGCTTGTCTCATACAAGAACGACGAGTGGGATGAAGAAGAGTAA - >AT3G25980.3
ATTTCCGAGGAAGACTAGCCGTTACGCTCTTATTCCTTTTTTTTTCTTTTTCTTTCTTTCCTTCTTTTTAATCCTTCCCTCAAATATCTTTTTTTCCCTTCAAAATCATTAAAACCCTAAGCGACGCTGTTAACACTTGCGAATTCAATTTTCAAAATCACCGATCCTTAGACTCCATGGCGTCCAAAACAGCGGCTGCTAAAGATATCATCACTTTACACGGATCTGCTGCCATCGTCAGCGAATTCTTCTGTACGTATCTTCATTTTTTCTTAGACTCAATTTCAGATATCTTCTTCTCGATTTGATGTTTTTTTTTTCCTTCTTCTTCTTCCTCCAGGTTACGCTGCGAACAGTATATTGTATAATCGTGCAGTTTATCCAGAGGAAAGTTTTGTGAAAGTGAAGAAATATGGACTTCCGATGTTGCTTATTGAAGATGAATCCGTCAAATCTTTCATGTCTAATCTCACTTCTCAGATCTCCGAATGGCTTGAAGCTGGGAAGTTGCAGAGAGTAGTGTTAGTGATTATGAGTAAAGCTACTGGTGAAGTCTTGGAGAGGTGGAATTTTCGTATTGAGACTGATAATGAAGTTGTTGACAAAGGTGTGTCGAGGGAGAAGAGTGATAAGGAGATCATGAGGGAGATTCAAGCTATTATGAGACAGGTTGCTTCAAGTGTTACTTACTTGCCTTGTCTTGATGAAACATGTGTGTTTGATGTATTGGCGTATACGGATACTGATGTGGCTGTTCCATTCACTTGGATCGAGAGCGACCCGAAGTTGATTGCTAATCCACAGATGGTTAAGTTACACGGTTTTGATACCAAGATTCACAAAGTCGACACGCTTGTCTCATACAAGAACGACGAGTGGGATGAAGAAGAGTAA - >AT3G25980.2
ATTTCCGAGGAAGACTAGCCGTTACGCTCTTATTCCTTTTTTTTTCTTTTTCTTTCTTTCCTTCTTTTTAATCCTTCCCTCAAATATCTTTTTTTCCCTTCAAAATCATTAAAACCCTAAGCGACGCTGTTAACACTTGCGAATTCAATTTTCAAAATCACCGATCCTTAGACTCCATGGCGTCCAAAACAGCGGCTGCTAAAGATATCATCACTTTACACGGATCTGCTGCCATCGTCAGCGAATTCTTCTGTACGTATCTTCATTTTTTCTTAGACTCAATTTCAGATATCTTCTTCTCGATTTGATGTTTTTTTTTTCCTTCTTCTTCTTCCTCCAGGTTACGCTGCGAACAGTATATTGTATAATCGTGCAGTTTATCCAGAGGAAAGTTTTGTGAAAGTGAAGAAATATGGACTTCCGATGTTGCTTATTGAAGATGAATCCGTCAAATCTTTCATGTCTAATCTCACTTCTCAGATCTCCGAATGGCTTGAAGCTGGGAAGTTGCAGAGAGTAGTGTTAGTGATTATGAGTAAAGCTACTGGTGAAGTCTTGGAGAGGTGGAATTTTCGTATTGAGACTGATAATGAAGTTGTTGACAAAGGTGTGTCGAGGGAGAAGAGTGATAAGGAGATCATGAGGGAGATTCAAGCTATTATGAGACAGGTTGCTTCAAGTGTTACTTACTTGCCTTGTCTTGATGAAACATGTGTGTTTGATGTATTGGCGTATACGGATACTGATGTGGCTGTTCCATTCACTTGGATCGAGAGCGACCCGAAGTTGATTGCTAATCCACAGATGGTTAAGTTACACGGTTTTGATACCAAGATTCACAAAGTCGACACGCTTGTCTCATACAAGAACGACGAGTGGGATGAAGAAGAGTAA - >AT3G25980.1
ATTTCCGAGGAAGACTAGCCGTTACGCTCTTATTCCTTTTTTTTTCTTTTTCTTTCTTTCCTTCTTTTTAATCCTTCCCTCAAATATCTTTTTTTCCCTTCAAAATCATTAAAACCCTAAGCGACGCTGTTAACACTTGCGAATTCAATTTTCAAAATCACCGATCCTTAGACTCCATGGCGTCCAAAACAGCGGCTGCTAAAGATATCATCACTTTACACGGATCTGCTGCCATCGTCAGCGAATTCTTCTGTACGTATCTTCATTTTTTCTTAGACTCAATTTCAGATATCTTCTTCTCGATTTGATGTTTTTTTTTTCCTTCTTCTTCTTCCTCCAGGTTACGCTGCGAACAGTATATTGTATAATCGTGCAGTTTATCCAGAGGAAAGTTTTGTGAAAGTGAAGAAATATGGACTTCCGATGTTGCTTATTGAAGATGAATCCGTCAAATCTTTCATGTCTAATCTCACTTCTCAGATCTCCGAATGGCTTGAAGCTGGGAAGTTGCAGAGAGTAGTGTTAGTGATTATGAGTAAAGCTACTGGTGAAGTCTTGGAGAGGTGGAATTTTCGTATTGAGACTGATAATGAAGTTGTTGACAAAGGTGTGTCGAGGGAGAAGAGTGATAAGGAGATCATGAGGGAGATTCAAGCTATTATGAGACAGGTTGCTTCAAGTGTTACTTACTTGCCTTGTCTTGATGAAACATGTGTGTTTGATGTATTGGCGTATACGGATACTGATGTGGCTGTTCCATTCACTTGGATCGAGAGCGACCCGAAGTTGATTGCTAATCCACAGATGGTTAAGTTACACGGTTTTGATACCAAGATTCACAAAGTCGACACGCTTGTCTCATACAAGAACGACGAGTGGGATGAAGAAGAGTAA
CDS Sequence
- >AT3G25980.4
ATGTTGCTTATTGAAGATGAATCCGTCAAATCTTTCATGTCTAATCTCACTTCTCAGATCTCCGAATGGCTTGAAGCTGGGAAGTTGCAGAGAGTAGTGTTAGTGATTATGAGTAAAGCTACTGGTGAAGTCTTGGAGAGGTGGAATTTTCGTATTGAGACTGATAATGAAGTTGTTGACAAAGGTGTGTCGAGGGAGAAGAGTGATAAGGAGATCATGAGGGAGATTCAAGCTATTATGAGACAGGTTGCTTCAAGTGTTACTTACTTGCCTTGTCTTGATGAAACATGTGTGTTTGATGTATTGGCGTATACGGATACTGATGTGGCTGTTCCATTCACTTGGATCGAGAGCGACCCGAAGTTGATTGCTAATCCACAGATGGTTAAGTTACACGGTTTTGATACCAAGATTCACAAAGTCGACACGCTTGTCTCATACAAGAACGACGAGTGGGATGAAGAAGAGTAA - >AT3G25980.3
ATGTTGCTTATTGAAGATGAATCCGTCAAATCTTTCATGTCTAATCTCACTTCTCAGATCTCCGAATGGCTTGAAGCTGGGAAGTTGCAGAGAGTAGTGTTAGTGATTATGAGTAAAGCTACTGGTGAAGTCTTGGAGAGGTGGAATTTTCGTATTGAGACTGATAATGAAGTTGTTGACAAAGGTGTGTCGAGGGAGAAGAGTGATAAGGAGATCATGAGGGAGATTCAAGCTATTATGAGACAGGTTGCTTCAAGTGTTACTTACTTGCCTTGTCTTGATGAAACATGTGTGTTTGATGTATTGGCGTATACGGATACTGATGTGGCTGTTCCATTCACTTGGATCGAGAGCGACCCGAAGTTGATTGCTAATCCACAGATGGTTAAGTTACACGGTTTTGATACCAAGATTCACAAAGTCGACACGCTTGTCTCATACAAGAACGACGAGTGGGATGAAGAAGAGTAA - >AT3G25980.2
ATGTTGCTTATTGAAGATGAATCCGTCAAATCTTTCATGTCTAATCTCACTTCTCAGATCTCCGAATGGCTTGAAGCTGGGAAGTTGCAGAGAGTAGTGTTAGTGATTATGAGTAAAGCTACTGGTGAAGTCTTGGAGAGGTGGAATTTTCGTATTGAGACTGATAATGAAGTTGTTGACAAAGGTGTGTCGAGGGAGAAGAGTGATAAGGAGATCATGAGGGAGATTCAAGCTATTATGAGACAGGTTGCTTCAAGTGTTACTTACTTGCCTTGTCTTGATGAAACATGTGTGTTTGATGTATTGGCGTATACGGATACTGATGTGGCTGTTCCATTCACTTGGATCGAGAGCGACCCGAAGTTGATTGCTAATCCACAGATGGTTAAGTTACACGGTTTTGATACCAAGATTCACAAAGTCGACACGCTTGTCTCATACAAGAACGACGAGTGGGATGAAGAAGAGTAA - >AT3G25980.1
ATGTTGCTTATTGAAGATGAATCCGTCAAATCTTTCATGTCTAATCTCACTTCTCAGATCTCCGAATGGCTTGAAGCTGGGAAGTTGCAGAGAGTAGTGTTAGTGATTATGAGTAAAGCTACTGGTGAAGTCTTGGAGAGGTGGAATTTTCGTATTGAGACTGATAATGAAGTTGTTGACAAAGGTGTGTCGAGGGAGAAGAGTGATAAGGAGATCATGAGGGAGATTCAAGCTATTATGAGACAGGTTGCTTCAAGTGTTACTTACTTGCCTTGTCTTGATGAAACATGTGTGTTTGATGTATTGGCGTATACGGATACTGATGTGGCTGTTCCATTCACTTGGATCGAGAGCGACCCGAAGTTGATTGCTAATCCACAGATGGTTAAGTTACACGGTTTTGATACCAAGATTCACAAAGTCGACACGCTTGTCTCATACAAGAACGACGAGTGGGATGAAGAAGAGTAA
Protein Sequence
- >AT3G25980.4
MLLIEDESVKSFMSNLTSQISEWLEAGKLQRVVLVIMSKATGEVLERWNFRIETDNEVVDKGVSREKSDKEIMREIQAIMRQVASSVTYLPCLDETCVFDVLAYTDTDVAVPFTWIESDPKLIANPQMVKLHGFDTKIHKVDTLVSYKNDEWDEEE - >AT3G25980.3
MLLIEDESVKSFMSNLTSQISEWLEAGKLQRVVLVIMSKATGEVLERWNFRIETDNEVVDKGVSREKSDKEIMREIQAIMRQVASSVTYLPCLDETCVFDVLAYTDTDVAVPFTWIESDPKLIANPQMVKLHGFDTKIHKVDTLVSYKNDEWDEEE - >AT3G25980.2
MLLIEDESVKSFMSNLTSQISEWLEAGKLQRVVLVIMSKATGEVLERWNFRIETDNEVVDKGVSREKSDKEIMREIQAIMRQVASSVTYLPCLDETCVFDVLAYTDTDVAVPFTWIESDPKLIANPQMVKLHGFDTKIHKVDTLVSYKNDEWDEEE - >AT3G25980.1
MLLIEDESVKSFMSNLTSQISEWLEAGKLQRVVLVIMSKATGEVLERWNFRIETDNEVVDKGVSREKSDKEIMREIQAIMRQVASSVTYLPCLDETCVFDVLAYTDTDVAVPFTWIESDPKLIANPQMVKLHGFDTKIHKVDTLVSYKNDEWDEEE