Information report for AT3G25900
Gene Details
|
|
Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
Functional Keywords
Literature and News
- Overexpression of AtCpNifS enhances selenium tolerance and accumulation in Arabidopsis. DOI: 10.1104/pp.105.068684 ; PMID: 16244144
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- The relative contribution of genes operating in the S-methylmethionine cycle to methionine metabolism in Arabidopsis seeds. DOI: 10.1007/s00299-017-2124-1 ; PMID: 28289884
Gene Resources
- UniProt: F4JBA7
- EMBL: CP002686
- AlphaFoldDB: F4JBA7
- EnsemblPlants: AT3G25900.3
- Gramene: AT3G25900.3
- ExpressionAtlas: AT3G25900
- InterPro: IPR003726, IPR017226, IPR036589
- PANTHER: PTHR46015, PTHR46015:SF7
- SUPFAM: SSF82282
- PROSITE: PS50970
- Gene3D: 3.20.20.330
- SWISS-MODEL: F4JBA7
Homologs
- Brassica napus GSBRNA2T00127172001
- Brassica oleracea Bo4g097090, Bo8g098570
Sequences
cDNA Sequence
- >AT3G25900.3
GAAGCATCCGTTGTATTTTTGATAGGGAAGAAAAAAAAACACAAAAGCGGCGTTGATTTTTTTAGATTTTCCGACAAGATTTCTCGTGAGAAGATTTGTCTGAATCTTTCTTTCGAAGAGGTTTTGAGTTAATTTCAAAATGGTTTTGGAGAAAAAATCTGCATTGTTGGAAGATTTGATAAAGAAATGCGGCGGTTGTGCGGTGGTCGACGGTGGTTTCGCTACCCAGCTTGAGATTCACGGCGCCGCCATTAACGACCCTTTGTGGAGTGCTGTTTCTCTCATCAAAAATCCTGAGCTCATCAAAAGGGTTCACATGGAATATTTGGAAGCTGGTGCAGACATTGTGGTTACTTCATCTTATCAGGCTACGATCCCGGGGTTTCTTTCTAGAGGTTTATCAATAGAAGAGAGCGAGTCTTTGCTTCAAAAGAGTGTAGAATTAGCTGTTGAAGCTCGTGATAGATTCTGGGAGAAAGTGAGCAAGGTTTCAGGACATAGCTATAACAGAGCTCTTGTAGCTGCATCTATTGGAAGCTATGGTGCTTATCTTGCTGATGGCTCTGAGTACAGTGGTCACTATGGTGAGAATGTAAGTTTGGATAAACTAAAGGACTTTCACAGGAGAAGACTTCAAGTCTTAGTGGAAGCTGGTCCTGATCTTCTTGCTTTTGAAACCATACCGAATAAACTCGAAGCTCAGGCTTGCGTTGAGCTTTTGGAGGAAGAGAAAGTGCAAATCCCAGCATGGATCTGCTTCACATCTGTAGATGGTGAGAAAGCTCCATCAGGAGAGAGCTTTGAGGAATGTCTTGAACCTCTTAACAAAAGCAACAATATTTACGCACTGACGAAGAAAGCAATCGTTGTTTACCCGAATAGCGGAGAGGTTTGGGATGGAAAAGCTAAACAATGGCTGCCATCACAATGCTTTGGTGATGATGAATTTGAGATGTTTGCAACGAAATGGCGTGACCTTGGAGCTAAACTCATCGGAGGATGTTGCAGGACTACACCTTCCACCATTAACGCTATCTCCAGAGATTTGAAACGAAGATGATTTTTCTTCAGGGAGAAAAGACTGAAGATTCTTTTTCAACTTTTTAACTAGCTTGACCATTGTTAGGGCTATCTATCTGTTTTCTGTTGTTTTCTTGTTGTTCACGTTTTCTTTGTGGTTTGATGATATGTATTCGTAAACTAGGCCTTGGGCGTTTTCAATGTAATGGCCCATAAAATATTTTCTTTATC - >AT3G25900.2
GAAGCATCCGTTGTATTTTTGATAGGGAAGAAAAAAAAACACAAAAGCGGCGTTGATTTTTTTAGATTTTCCGACAAGATTTCTCGTGAGAAGATTTGTCTGAATCTTTCTTTCGAAGAGGTTTTGAGTTAATTTCAAAATGGTTTTGGAGAAAAAATCTGCATTGTTGGAAGATTTGATAAAGAAATGCGGCGGTTGTGCGGTGGTCGACGGTGGTTTCGCTACCCAGCTTGAGATTCACGGCGCCGCCATTAACGACCCTTTGTGGAGTGCTGTTTCTCTCATCAAAAATCCTGAGCTCATCAAAAGGGTTCACATGGAATATTTGGAAGCTGGTGCAGACATTGTGGTTACTTCATCTTATCAGGCTACGATCCCGGGGTTTCTTTCTAGAGGTTTATCAATAGAAGAGAGCGAGTCTTTGCTTCAAAAGAGTGTAGAATTAGCTGTTGAAGCTCGTGATAGATTCTGGGAGAAAGTGAGCAAGGTTTCAGGACATAGCTATAACAGAGCTCTTGTAGCTGCATCTATTGGAAGCTATGGTGCTTATCTTGCTGATGGCTCTGAGTACAGTGGTCACTATGGTGAGAATGTAAGTTTGGATAAACTAAAGGACTTTCACAGGAGAAGACTTCAAGTCTTAGTGGAAGCTGGTCCTGATCTTCTTGCTTTTGAAACCATACCGAATAAACTCGAAGCTCAGGCTTGCGTTGAGCTTTTGGAGGAAGAGAAAGTGCAAATCCCAGCATGGATCTGCTTCACATCTGTAGATGGTGAGAAAGCTCCATCAGGAGAGAGCTTTGAGGAATGTCTTGAACCTCTTAACAAAAGCAACAATATTTACGCACTGACGAAGAAAGCAATCGTTGTTTACCCGAATAGCGGAGAGGTTTGGGATGGAAAAGCTAAACAATGGCTGCCATCACAATGCTTTGGTGATGATGAATTTGAGATGTTTGCAACGAAATGGCGTGACCTTGGAGCTAAACTCATCGGAGGATGTTGCAGGACTACACCTTCCACCATTAACGCTATCTCCAGAGATTTGAAACGAAGATGATTTTTCTTCAGGGAGAAAAGACTGAAGATTCTTTTTCAACTTTTTAACTAGCTTGACCATTGTTAGGGCTATCTATCTGTTTTCTGTTGTTTTCTTGTTGTTCACGTTTTCTTTGTGGTTTGATGATATGTATTCGTAAACTAGGCCTTGGGCGTTTTCAATGTAATGGCCCATAAAATATTTTCTTTATC - >AT3G25900.1
GAAGCATCCGTTGTATTTTTGATAGGGAAGAAAAAAAAACACAAAAGCGGCGTTGATTTTTTTAGATTTTCCGACAAGATTTCTCGTGAGAAGATTTGTCTGAATCTTTCTTTCGAAGAGGTTTTGAGTTAATTTCAAAATGGTTTTGGAGAAAAAATCTGCATTGTTGGAAGATTTGATAAAGAAATGCGGCGGTTGTGCGGTGGTCGACGGTGGTTTCGCTACCCAGCTTGAGATTCACGGCGCCGCCATTAACGACCCTTTGTGGAGTGCTGTTTCTCTCATCAAAAATCCTGAGCTCATCAAAAGGGTTCACATGGAATATTTGGAAGCTGGTGCAGACATTGTGGTTACTTCATCTTATCAGGCTACGATCCCGGGGTTTCTTTCTAGAGGTTTATCAATAGAAGAGAGCGAGTCTTTGCTTCAAAAGAGTGTAGAATTAGCTGTTGAAGCTCGTGATAGATTCTGGGAGAAAGTGAGCAAGGTTTCAGGACATAGCTATAACAGAGCTCTTGTAGCTGCATCTATTGGAAGCTATGGTGCTTATCTTGCTGATGGCTCTGAGTACAGTGGTCACTATGGTGAGAATGTAAGTTTGGATAAACTAAAGGACTTTCACAGGAGAAGACTTCAAGTCTTAGTGGAAGCTGGTCCTGATCTTCTTGCTTTTGAAACCATACCGAATAAACTCGAAGCTCAGGCTTGCGTTGAGCTTTTGGAGGAAGAGAAAGTGCAAATCCCAGCATGGATCTGCTTCACATCTGTAGATGGTGAGAAAGCTCCATCAGGAGAGAGCTTTGAGGAATGTCTTGAACCTCTTAACAAAAGCAACAATATTTACGCACTGACGAAGAAAGCAATCGTTGTTTACCCGAATAGCGGAGAGGTTTGGGATGGAAAAGCTAAACAATGGCTGCCATCACAATGCTTTGGTGATGATGAATTTGAGATGTTTGCAACGAAATGGCGTGACCTTGGAGCTAAACTCATCGGAGGATGTTGCAGGACTACACCTTCCACCATTAACGCTATCTCCAGAGATTTGAAACGAAGATGATTTTTCTTCAGGGAGAAAAGACTGAAGATTCTTTTTCAACTTTTTAACTAGCTTGACCATTGTTAGGGCTATCTATCTGTTTTCTGTTGTTTTCTTGTTGTTCACGTTTTCTTTGTGGTTTGATGATATGTATTCGTAAACTAGGCCTTGGGCGTTTTCAATGTAATGGCCCATAAAATATTTTCTTTATC
CDS Sequence
- >AT3G25900.3
ATGGTTTTGGAGAAAAAATCTGCATTGTTGGAAGATTTGATAAAGAAATGCGGCGGTTGTGCGGTGGTCGACGGTGGTTTCGCTACCCAGCTTGAGATTCACGGCGCCGCCATTAACGACCCTTTGTGGAGTGCTGTTTCTCTCATCAAAAATCCTGAGCTCATCAAAAGGGTTCACATGGAATATTTGGAAGCTGGTGCAGACATTGTGGTTACTTCATCTTATCAGGCTACGATCCCGGGGTTTCTTTCTAGAGGTTTATCAATAGAAGAGAGCGAGTCTTTGCTTCAAAAGAGTGTAGAATTAGCTGTTGAAGCTCGTGATAGATTCTGGGAGAAAGTGAGCAAGGTTTCAGGACATAGCTATAACAGAGCTCTTGTAGCTGCATCTATTGGAAGCTATGGTGCTTATCTTGCTGATGGCTCTGAGTACAGTGGTCACTATGGTGAGAATGTAAGTTTGGATAAACTAAAGGACTTTCACAGGAGAAGACTTCAAGTCTTAGTGGAAGCTGGTCCTGATCTTCTTGCTTTTGAAACCATACCGAATAAACTCGAAGCTCAGGCTTGCGTTGAGCTTTTGGAGGAAGAGAAAGTGCAAATCCCAGCATGGATCTGCTTCACATCTGTAGATGGTGAGAAAGCTCCATCAGGAGAGAGCTTTGAGGAATGTCTTGAACCTCTTAACAAAAGCAACAATATTTACGCACTGACGAAGAAAGCAATCGTTGTTTACCCGAATAGCGGAGAGGTTTGGGATGGAAAAGCTAAACAATGGCTGCCATCACAATGCTTTGGTGATGATGAATTTGAGATGTTTGCAACGAAATGGCGTGACCTTGGAGCTAAACTCATCGGAGGATGTTGCAGGACTACACCTTCCACCATTAACGCTATCTCCAGAGATTTGAAACGAAGATGA - >AT3G25900.2
ATGGTTTTGGAGAAAAAATCTGCATTGTTGGAAGATTTGATAAAGAAATGCGGCGGTTGTGCGGTGGTCGACGGTGGTTTCGCTACCCAGCTTGAGATTCACGGCGCCGCCATTAACGACCCTTTGTGGAGTGCTGTTTCTCTCATCAAAAATCCTGAGCTCATCAAAAGGGTTCACATGGAATATTTGGAAGCTGGTGCAGACATTGTGGTTACTTCATCTTATCAGGCTACGATCCCGGGGTTTCTTTCTAGAGGTTTATCAATAGAAGAGAGCGAGTCTTTGCTTCAAAAGAGTGTAGAATTAGCTGTTGAAGCTCGTGATAGATTCTGGGAGAAAGTGAGCAAGGTTTCAGGACATAGCTATAACAGAGCTCTTGTAGCTGCATCTATTGGAAGCTATGGTGCTTATCTTGCTGATGGCTCTGAGTACAGTGGTCACTATGGTGAGAATGTAAGTTTGGATAAACTAAAGGACTTTCACAGGAGAAGACTTCAAGTCTTAGTGGAAGCTGGTCCTGATCTTCTTGCTTTTGAAACCATACCGAATAAACTCGAAGCTCAGGCTTGCGTTGAGCTTTTGGAGGAAGAGAAAGTGCAAATCCCAGCATGGATCTGCTTCACATCTGTAGATGGTGAGAAAGCTCCATCAGGAGAGAGCTTTGAGGAATGTCTTGAACCTCTTAACAAAAGCAACAATATTTACGCACTGACGAAGAAAGCAATCGTTGTTTACCCGAATAGCGGAGAGGTTTGGGATGGAAAAGCTAAACAATGGCTGCCATCACAATGCTTTGGTGATGATGAATTTGAGATGTTTGCAACGAAATGGCGTGACCTTGGAGCTAAACTCATCGGAGGATGTTGCAGGACTACACCTTCCACCATTAACGCTATCTCCAGAGATTTGAAACGAAGATGA - >AT3G25900.1
ATGGTTTTGGAGAAAAAATCTGCATTGTTGGAAGATTTGATAAAGAAATGCGGCGGTTGTGCGGTGGTCGACGGTGGTTTCGCTACCCAGCTTGAGATTCACGGCGCCGCCATTAACGACCCTTTGTGGAGTGCTGTTTCTCTCATCAAAAATCCTGAGCTCATCAAAAGGGTTCACATGGAATATTTGGAAGCTGGTGCAGACATTGTGGTTACTTCATCTTATCAGGCTACGATCCCGGGGTTTCTTTCTAGAGGTTTATCAATAGAAGAGAGCGAGTCTTTGCTTCAAAAGAGTGTAGAATTAGCTGTTGAAGCTCGTGATAGATTCTGGGAGAAAGTGAGCAAGGTTTCAGGACATAGCTATAACAGAGCTCTTGTAGCTGCATCTATTGGAAGCTATGGTGCTTATCTTGCTGATGGCTCTGAGTACAGTGGTCACTATGGTGAGAATGTAAGTTTGGATAAACTAAAGGACTTTCACAGGAGAAGACTTCAAGTCTTAGTGGAAGCTGGTCCTGATCTTCTTGCTTTTGAAACCATACCGAATAAACTCGAAGCTCAGGCTTGCGTTGAGCTTTTGGAGGAAGAGAAAGTGCAAATCCCAGCATGGATCTGCTTCACATCTGTAGATGGTGAGAAAGCTCCATCAGGAGAGAGCTTTGAGGAATGTCTTGAACCTCTTAACAAAAGCAACAATATTTACGCACTGACGAAGAAAGCAATCGTTGTTTACCCGAATAGCGGAGAGGTTTGGGATGGAAAAGCTAAACAATGGCTGCCATCACAATGCTTTGGTGATGATGAATTTGAGATGTTTGCAACGAAATGGCGTGACCTTGGAGCTAAACTCATCGGAGGATGTTGCAGGACTACACCTTCCACCATTAACGCTATCTCCAGAGATTTGAAACGAAGATGA
Protein Sequence
- >AT3G25900.3
MVLEKKSALLEDLIKKCGGCAVVDGGFATQLEIHGAAINDPLWSAVSLIKNPELIKRVHMEYLEAGADIVVTSSYQATIPGFLSRGLSIEESESLLQKSVELAVEARDRFWEKVSKVSGHSYNRALVAASIGSYGAYLADGSEYSGHYGENVSLDKLKDFHRRRLQVLVEAGPDLLAFETIPNKLEAQACVELLEEEKVQIPAWICFTSVDGEKAPSGESFEECLEPLNKSNNIYALTKKAIVVYPNSGEVWDGKAKQWLPSQCFGDDEFEMFATKWRDLGAKLIGGCCRTTPSTINAISRDLKRR - >AT3G25900.2
MVLEKKSALLEDLIKKCGGCAVVDGGFATQLEIHGAAINDPLWSAVSLIKNPELIKRVHMEYLEAGADIVVTSSYQATIPGFLSRGLSIEESESLLQKSVELAVEARDRFWEKVSKVSGHSYNRALVAASIGSYGAYLADGSEYSGHYGENVSLDKLKDFHRRRLQVLVEAGPDLLAFETIPNKLEAQACVELLEEEKVQIPAWICFTSVDGEKAPSGESFEECLEPLNKSNNIYALTKKAIVVYPNSGEVWDGKAKQWLPSQCFGDDEFEMFATKWRDLGAKLIGGCCRTTPSTINAISRDLKRR - >AT3G25900.1
MVLEKKSALLEDLIKKCGGCAVVDGGFATQLEIHGAAINDPLWSAVSLIKNPELIKRVHMEYLEAGADIVVTSSYQATIPGFLSRGLSIEESESLLQKSVELAVEARDRFWEKVSKVSGHSYNRALVAASIGSYGAYLADGSEYSGHYGENVSLDKLKDFHRRRLQVLVEAGPDLLAFETIPNKLEAQACVELLEEEKVQIPAWICFTSVDGEKAPSGESFEECLEPLNKSNNIYALTKKAIVVYPNSGEVWDGKAKQWLPSQCFGDDEFEMFATKWRDLGAKLIGGCCRTTPSTINAISRDLKRR