Gene Details:
- Gene ID: AT3G25890
- Gene Symbol: CRF11
- Gene Name: cytokinin response factor 11
- Description: Integrase-type DNA-binding superfamily protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Type III effectors orchestrate a complex interplay between transcriptional networks to modify basal defence responses during pathogenesis and resistance. DOI: 10.1111/j.1365-313X.2006.02672.x ; PMID: 16553893
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Genome-wide analysis of the ERF gene family in Arabidopsis and rice. DOI: 10.1104/pp.105.073783 ; PMID: 16407444
Sequences:
cDNA Sequence
- >AT3G25890.2
AACATCTTTTTAAATTCCTCGGTCTCTTAAATTTACCAGTTACATAACTTTCTTTTATTTTTCCGACATAAATTAAAAGTTTTGTCTTTGGTAATAGAGAGGCAGAAAAATCTTGGCCATAGATTTGTCATCTGTTTTCGATTCGTTTTGATTCTTTACTTTATCTTCTTCTTCTTCTTCTTCTTCCTCTTTTTGAATCTTTTATCTTCTCACTTTTCTTTTTCACTTTTGGGAAGCTCGAAGAGCTGAGAGGAGTGTGAGAGAGAAAAGGATCTTTGAAGTCGCCGGAATAATTTGTTTAACCGGAGCTCTGTCTTTGACTCTACGCTTCTCTCTCTTCTTCTTCCTTCTTCGTCTTCTTAATCGCTTTCTGCTCTGTTTTTCTCGTTCATCAAGCTACATCTACTAGCTCTCTCAGTGATTGATTTCTCACAGTTTCATCGATTTCCATGCGTTTAAGACCTAAAAGGTAACTGGGTTTGCTAAAGTTTGTTACTTTGAATGGTTTTTATAGTTTCTCTGTTCGAATCTGAAGTGGGTTGTTGTGTTTTTGCTGGTTATTGAAACAGGACTTGTTCTGGGGTAAAGGACTTTTCTTGTTCTTGAGAGAGTTCATTTTGAGGCTTTTCTGGGAATTTTGAGAGGTTTTTTAGGGTTTAAGGGGGTTTGGTTTTGAATTTCGCACACCAAGTGTTCGATAAAATGGCTGAACGAAAGAAACGCTCTTCTATTCAAACCAATAAACCCAACAAAAAACCCATGAAGAAGAAACCTTTTCAGCTAAATCACCTCCCAGGTTTATCTGAAGATTTGAAGACTATGAGAAAACTCCGTTTCGTTGTGAATGATCCTTACGCTACTGACTACTCATCAAGCGAAGAAGAAGAAAGGAGTCAGAGAAGGAAACGTTATGTCTGTGAGATCGATCTTCCTTTCGCTCAAGCTGCTACTCAAGCAGAATCTGAAAGCTCATATTGTCAGGAGAGTAACAATAATGGTGTAAGCAAGACTAAAATCTCAGCTTGTAGCAAAAAGGTTTTACGCAGCAAAGCATCTCCGGTCGTTGGACGTTCTTCTACTACTGTCTCGAAGCCTGTTGGTGTTAGGCAGAGGAAATGGGGTAAATGGGCTGCTGAGATTAGACATCCAATCACCAAAGTAAGAACTTGGTTGGGTACTTACGAGACGCTTGAACAAGCAGCTGATGCTTATGCTACCAAGAAGCTTGAGTTTGATGCTCTGGCTGCAGCCACTTCTGCTGCTTCCTCTGTTTTGTCAAATGAGTCTGGTTCTATGATCTCAGCCTCAGGGTCAAGCATTGATCTTGACAAGAAGCTAGTTGATTCGACTCTTGATCAACAAGCTGGTGAATCGAAGAAAGCGAGTTTTGATTTCGACTTTGCAGATCTACAGATTCCTGAAATGGGTTGCTTCATTGATGACTCATTCATCCCAAATGCTTGTGAGCTTGATTTTCTCTTAACAGAAGAGAACAACAACCAAATGTTGGATGATTACTGTGGCATAGATGATCTGGACATCATTGGTCTTGAATGTGACGGTCCAAGCGAACTTCCAGACTATGATTTCTCAGATGTGGAGATCGATCTTGGTCTCATTGGAACCACCATTGACAAGTATGCTTTCGTTGATCATATCGCAACAACTACTCCCACTCCTCTTAATATCGCGTGCCCATAAGTTTTGCAGCTAGGTGTTATTATTAGCTATAGGAGCAACGTAAAAAGCTCGTTGTTACTCGGTTTTGTCTTAAGTTATTAAAGTATAGCAGAGGCAGTTAATCTCAAGGGAAGCAAAAACCCTAAAGATAGAAGCAGATGCAGTTTTGTGTGTTGGTGTTACTAAAGAAAGTTTTGTTGACATAATGGTTTTGATGTTGTGGAGAAGATAGAGAGGTGTGATCGAAATTGTAAATCTCAGGTGGTTTTTTTTGAAGGCAATTGTTTCTCATTTAGGGTTTTTTTCTATATGAGGATTGTCTTTGAAAAGCCTTTAGATGTTTTCTAATTCGTAAGCTCTCTCAATCTTTGTAAGTTTTGCCTGTTGAGTTATTGATACATATGTGAGACCTACTTTATTTGTTTTGTGCT - >AT3G25890.1
AACATCTTTTTAAATTCCTCGGTCTCTTAAATTTACCAGTTACATAACTTTCTTTTATTTTTCCGACATAAATTAAAAGTTTTGTCTTTGGTAATAGAGAGGCAGAAAAATCTTGGCCATAGATTTGTCATCTGTTTTCGATTCGTTTTGATTCTTTACTTTATCTTCTTCTTCTTCTTCTTCTTCCTCTTTTTGAATCTTTTATCTTCTCACTTTTCTTTTTCACTTTTGGGAAGCTCGAAGAGCTGAGAGGAGTGTGAGAGAGAAAAGGATCTTTGAAGTCGCCGGAATAATTTGTTTAACCGGAGCTCTGTCTTTGACTCTACGCTTCTCTCTCTTCTTCTTCCTTCTTCGTCTTCTTAATCGCTTTCTGCTCTGTTTTTCTCGTTCATCAAGCTACATCTACTAGCTCTCTCAGTGATTGATTTCTCACAGTTTCATCGATTTCCATGCGTTTAAGACCTAAAAGGTAACTGGGTTTGCTAAAGTTTGTTACTTTGAATGGTTTTTATAGTTTCTCTGTTCGAATCTGAAGTGGGTTGTTGTGTTTTTGCTGGTTATTGAAACAGGACTTGTTCTGGGGTAAAGGACTTTTCTTGTTCTTGAGAGAGTTCATTTTGAGGCTTTTCTGGGAATTTTGAGAGGTTTTTTAGGGTTTAAGGGGGTTTGGTTTTGAATTTCGCACACCAAGTGTTCGATAAAATGGCTGAACGAAAGAAACGCTCTTCTATTCAAACCAATAAACCCAACAAAAAACCCATGAAGAAGAAACCTTTTCAGCTAAATCACCTCCCAGGTTTATCTGAAGATTTGAAGACTATGAGAAAACTCCGTTTCGTTGTGAATGATCCTTACGCTACTGACTACTCATCAAGCGAAGAAGAAGAAAGGAGTCAGAGAAGGAAACGTTATGTCTGTGAGATCGATCTTCCTTTCGCTCAAGCTGCTACTCAAGCAGAATCTGAAAGCTCATATTGTCAGGAGAGTAACAATAATGGTGTAAGCAAGACTAAAATCTCAGCTTGTAGCAAAAAGGTTTTACGCAGCAAAGCATCTCCGGTCGTTGGACGTTCTTCTACTACTGTCTCGAAGCCTGTTGGTGTTAGGCAGAGGAAATGGGGTAAATGGGCTGCTGAGATTAGACATCCAATCACCAAAGTAAGAACTTGGTTGGGTACTTACGAGACGCTTGAACAAGCAGCTGATGCTTATGCTACCAAGAAGCTTGAGTTTGATGCTCTGGCTGCAGCCACTTCTGCTGCTTCCTCTGTTTTGTCAAATGAGTCTGGTTCTATGATCTCAGCCTCAGGGTCAAGCATTGATCTTGACAAGAAGCTAGTTGATTCGACTCTTGATCAACAAGCTGGTGAATCGAAGAAAGCGAGTTTTGATTTCGACTTTGCAGATCTACAGATTCCTGAAATGGGTTGCTTCATTGATGACTCATTCATCCCAAATGCTTGTGAGCTTGATTTTCTCTTAACAGAAGAGAACAACAACCAAATGTTGGATGATTACTGTGGCATAGATGATCTGGACATCATTGGTCTTGAATGTGACGGTCCAAGCGAACTTCCAGACTATGATTTCTCAGATGTGGAGATCGATCTTGGTCTCATTGGAACCACCATTGACAAGTATGCTTTCGTTGATCATATCGCAACAACTACTCCCACTCCTCTTAATATCGCGTGCCCATAAGTTTTGCAGCTAGGTGTTATTATTAGCTATAGGAGCAACGTAAAAAGCTCGTTGTTACTCGGTTTTGTCTTAAGTTATTAAAGTATAGCAGAGGCAGTTAATCTCAAGGGAAGCAAAAACCCTAAAGATAGAAGCAGATGCAGTTTTGTGTGTTGGTGTTACTAAAGAAAGTTTTGTTGACATAATGGTTTTGATGTTGTGGAGAAGATAGAGAGGTGTGATCGAAATTGTAAATCTCAGGTGGTTTTTTTTGAAGGCAATTGTTTCTCATTTAGGGTTTTTTTCTATATGAGGATTGTCTTTGAAAAGCCTTTAGATGTTTTCTAATTCGTAAGCTCTCTCAATCTTTGTAAGTTTTGCCTGTTGAGTTATTGATACATATGTGAGACCTACTTTATTTGTTTTGTGCT
CDS Sequence
- >AT3G25890.2
ATGGCTGAACGAAAGAAACGCTCTTCTATTCAAACCAATAAACCCAACAAAAAACCCATGAAGAAGAAACCTTTTCAGCTAAATCACCTCCCAGGTTTATCTGAAGATTTGAAGACTATGAGAAAACTCCGTTTCGTTGTGAATGATCCTTACGCTACTGACTACTCATCAAGCGAAGAAGAAGAAAGGAGTCAGAGAAGGAAACGTTATGTCTGTGAGATCGATCTTCCTTTCGCTCAAGCTGCTACTCAAGCAGAATCTGAAAGCTCATATTGTCAGGAGAGTAACAATAATGGTGTAAGCAAGACTAAAATCTCAGCTTGTAGCAAAAAGGTTTTACGCAGCAAAGCATCTCCGGTCGTTGGACGTTCTTCTACTACTGTCTCGAAGCCTGTTGGTGTTAGGCAGAGGAAATGGGGTAAATGGGCTGCTGAGATTAGACATCCAATCACCAAAGTAAGAACTTGGTTGGGTACTTACGAGACGCTTGAACAAGCAGCTGATGCTTATGCTACCAAGAAGCTTGAGTTTGATGCTCTGGCTGCAGCCACTTCTGCTGCTTCCTCTGTTTTGTCAAATGAGTCTGGTTCTATGATCTCAGCCTCAGGGTCAAGCATTGATCTTGACAAGAAGCTAGTTGATTCGACTCTTGATCAACAAGCTGGTGAATCGAAGAAAGCGAGTTTTGATTTCGACTTTGCAGATCTACAGATTCCTGAAATGGGTTGCTTCATTGATGACTCATTCATCCCAAATGCTTGTGAGCTTGATTTTCTCTTAACAGAAGAGAACAACAACCAAATGTTGGATGATTACTGTGGCATAGATGATCTGGACATCATTGGTCTTGAATGTGACGGTCCAAGCGAACTTCCAGACTATGATTTCTCAGATGTGGAGATCGATCTTGGTCTCATTGGAACCACCATTGACAAGTATGCTTTCGTTGATCATATCGCAACAACTACTCCCACTCCTCTTAATATCGCGTGCCCATAA - >AT3G25890.1
ATGGCTGAACGAAAGAAACGCTCTTCTATTCAAACCAATAAACCCAACAAAAAACCCATGAAGAAGAAACCTTTTCAGCTAAATCACCTCCCAGGTTTATCTGAAGATTTGAAGACTATGAGAAAACTCCGTTTCGTTGTGAATGATCCTTACGCTACTGACTACTCATCAAGCGAAGAAGAAGAAAGGAGTCAGAGAAGGAAACGTTATGTCTGTGAGATCGATCTTCCTTTCGCTCAAGCTGCTACTCAAGCAGAATCTGAAAGCTCATATTGTCAGGAGAGTAACAATAATGGTGTAAGCAAGACTAAAATCTCAGCTTGTAGCAAAAAGGTTTTACGCAGCAAAGCATCTCCGGTCGTTGGACGTTCTTCTACTACTGTCTCGAAGCCTGTTGGTGTTAGGCAGAGGAAATGGGGTAAATGGGCTGCTGAGATTAGACATCCAATCACCAAAGTAAGAACTTGGTTGGGTACTTACGAGACGCTTGAACAAGCAGCTGATGCTTATGCTACCAAGAAGCTTGAGTTTGATGCTCTGGCTGCAGCCACTTCTGCTGCTTCCTCTGTTTTGTCAAATGAGTCTGGTTCTATGATCTCAGCCTCAGGGTCAAGCATTGATCTTGACAAGAAGCTAGTTGATTCGACTCTTGATCAACAAGCTGGTGAATCGAAGAAAGCGAGTTTTGATTTCGACTTTGCAGATCTACAGATTCCTGAAATGGGTTGCTTCATTGATGACTCATTCATCCCAAATGCTTGTGAGCTTGATTTTCTCTTAACAGAAGAGAACAACAACCAAATGTTGGATGATTACTGTGGCATAGATGATCTGGACATCATTGGTCTTGAATGTGACGGTCCAAGCGAACTTCCAGACTATGATTTCTCAGATGTGGAGATCGATCTTGGTCTCATTGGAACCACCATTGACAAGTATGCTTTCGTTGATCATATCGCAACAACTACTCCCACTCCTCTTAATATCGCGTGCCCATAA
Protein Sequence
- >AT3G25890.2
MAERKKRSSIQTNKPNKKPMKKKPFQLNHLPGLSEDLKTMRKLRFVVNDPYATDYSSSEEEERSQRRKRYVCEIDLPFAQAATQAESESSYCQESNNNGVSKTKISACSKKVLRSKASPVVGRSSTTVSKPVGVRQRKWGKWAAEIRHPITKVRTWLGTYETLEQAADAYATKKLEFDALAAATSAASSVLSNESGSMISASGSSIDLDKKLVDSTLDQQAGESKKASFDFDFADLQIPEMGCFIDDSFIPNACELDFLLTEENNNQMLDDYCGIDDLDIIGLECDGPSELPDYDFSDVEIDLGLIGTTIDKYAFVDHIATTTPTPLNIACP - >AT3G25890.1
MAERKKRSSIQTNKPNKKPMKKKPFQLNHLPGLSEDLKTMRKLRFVVNDPYATDYSSSEEEERSQRRKRYVCEIDLPFAQAATQAESESSYCQESNNNGVSKTKISACSKKVLRSKASPVVGRSSTTVSKPVGVRQRKWGKWAAEIRHPITKVRTWLGTYETLEQAADAYATKKLEFDALAAATSAASSVLSNESGSMISASGSSIDLDKKLVDSTLDQQAGESKKASFDFDFADLQIPEMGCFIDDSFIPNACELDFLLTEENNNQMLDDYCGIDDLDIIGLECDGPSELPDYDFSDVEIDLGLIGTTIDKYAFVDHIATTTPTPLNIACP