Information report for AT3G25790
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Real-time RT-PCR profiling of over 1400 Arabidopsis transcription factors: and shoot-specific genes. DOI: 10.1111/j.1365-313X.2004.02051.x ; PMID: 15078338
- Genome-wide reprogramming of primary and secondary metabolism, protein synthesis, cellular growth processes, and the regulatory infrastructure of Arabidopsis in response to nitrogen. DOI: 10.1104/pp.104.047019 ; PMID: 15375205
- Loss of TIP1;1 aquaporin in Arabidopsis leads to cell and plant death. DOI: 10.1111/j.1365-313X.2004.02265.x ; PMID: 15584951
- Genome-wide expression profiling of ARABIDOPSIS RESPONSE REGULATOR 7(ARR7) overexpression in cytokinin response. DOI: 10.1007/s00438-006-0177-x ; PMID: 17061125
- A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana. DOI: 10.1101/gad.1476406 ; PMID: 17182867
- Overexpressing HRS1 confers hypersensitivity to low phosphate-elicited inhibition of primary root growth in Arabidopsis thaliana. DOI: 10.1111/j.1744-7909.2009.00819.x ; PMID: 19341407
- AtNIGT1/HRS1 integrates nitrate and phosphate signals at the Arabidopsis root tip. DOI: 10.1038/ncomms7274 ; PMID: 25723764
- Repression of Nitrogen Starvation Responses by Members of the Arabidopsis GARP-Type Transcription Factor NIGT1/HRS1 Subfamily. DOI: 10.1105/tpc.17.00810 ; PMID: 29622567
- A NIGT1-centred transcriptional cascade regulates nitrate signalling and incorporates phosphorus starvation signals in Arabidopsis. DOI: 10.1038/s41467-018-03832-6 ; PMID: 29636481
- Nitrate-inducible NIGT1 proteins modulate phosphate uptake and starvation signalling via transcriptional regulation of SPX genes. DOI: 10.1111/tpj.14637 ; PMID: 31811679
- NIGT1 family proteins exhibit dual mode DNA recognition to regulate nutrient response-associated genes in Arabidopsis. DOI: 10.1371/journal.pgen.1009197 ; PMID: 33137118
- GARP transcription factors repress Arabidopsis nitrogen starvation response via ROS-dependent and -independent pathways. DOI: 10.1093/jxb/erab114 ; PMID: 33758916
- Characterization of the signalling pathways involved in the repression of root nitrate uptake by nitrate in Arabidopsis thaliana. DOI: 10.1093/jxb/erad149 ; PMID: 37185665
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
Gene Resources
- UniProt: A0A1I9LLU5
- EMBL: CP002686
- AlphaFoldDB: A0A1I9LLU5
- EnsemblPlants: AT3G25790.2
- Gramene: AT3G25790.2
- ExpressionAtlas: AT3G25790
- InterPro: IPR006447, IPR009057, IPR017930
- PANTHER: PTHR31003, PTHR31003:SF20
- SUPFAM: SSF46689
- PROSITE: PS51294
- Gene3D: 1.10.10.60
- SWISS-MODEL: A0A1I9LLU5
Homologs
- Brassica napus GSBRNA2T00077987001, GSBRNA2T00139188001, GSBRNA2T00117875001, GSBRNA2T00067391001, GSBRNA2T00096100001, GSBRNA2T00015266001
- Brassica oleracea XP_013596362.1, XP_013596363.1, XP_013609905.1
- Brassica rapa XP_009152112.1, XP_009114113.1, XP_009114112.1, XP_009110590.1
- Raphanus raphanistrum RrC18734_p1
Sequences
cDNA Sequence
- >AT3G25790.2
ATGATCCTTGAGAAACCCTATAGAGCCATATATACGTTGTCTTTATAAAGAGACATAACTCATCTCTTCTTGACTAACTTTATAGTTAAAGTTATCAATTATTCGAAAACAAAGCTGGTTTTTTGTTTTGTCCCTTAAACCAGCATGATCAAGAACTTAAGTAATATGAAGAATGACAATCAGAAACGTGAAAAATGTTGCGAGTACATCGAAGCTCTCGAAGAAGAACGTCGCAAGATCAATGTTTTCCAACGCGAGCTTCCTCTTTGCGTAGAGCTCGTGACTCAAGCGATTGAGGCGTATAAGAGGGAGATATCAGGGACGTCGACGGATAACTTATACGGACAGTCGGAGTGCTCAGAGCAGACCACCGGAGAATGTGGGCGCATCTTGGATCTGTTCATACCAATCAAACACTCTTCGACCTCCATAGAAGAAGAGGTTGATGACAAAGATGATGATGATGAAGAACACCAGTCTCATGAAACCGACATAGATTTTGATGACAAGAACATGAAATCTGAATGGCTCAAGTCTGTTCAGCTCTGGAACCAATCCGACGCAGTTGTTTCTAATAATAGACAGGATCGCTCACAAGAAAAGACAGAGACGCTGGTAGAGTTGATAAAAATAAACGATGAAGCAGCGAAGAAAAACAACAACATAAAATCACCGGTGACTACTAGCGATGGTGGCAGTGGCGGTGGCGGTGGCAGAAGAGGGCAGAGAAAGAATAGGCGGTGTTGGTCGCAAGAGTTACACAGACGCTTCTTGAACGCTCTTAAACAACTTGGTGGCCCTCATGTAGCTACGCCGAAACAGATAAGAGATATAATGAAGGTTGATGGGTTAACAAATGATGAAGTCAAAAGTCATTTACAGGTTAGTAAATCATATTCCATGAAAAATACATGTAACTAATATGTAAAAGGTATATATTAATTTCATCATTTTAGTTACAAATGTTTTTATAATTTAGAAGGAAAATAATATTTATTGTTTCATATTTTTTTTAATGATAAATAGAAATATAGGCTGCATGCAAGACGGCCAAGCCAAACAACACCGAACAACAGAAACTCTCAAACGCAACATTTCGTGGTGGTTGGTGGAATATGGGTCCCACAGACTAACCATTCAACGGCCAACGCAGTCAACGCCGTCGCATCGGGTGAGACCACCGGGATTTATGGGCCTATGGTCAGTTCGTTGCCGTCCGAGTGGCCGAGGCATTCCAATTTTGGTAGGAAGATTTCGGAAGATAGATCAAGATGCTCTAACAACGGATTTTTTCGGTGTAGCTCACCAGCTATGTCTTGTTCTACTCGTACAAAGACGAAAGATGCAAAAATAATATCATAAATTTAATTTTTGATTATTTATTAAGAGAAAAAAGTTATAGACATTAATATTGTGAAGAGTGTATATATATAGATGTTGGAGCGTGACTCTATGTTATTTTTAGTTTCTTGGTTTTTTTCTATTAGCCGATGATATCTTTGATCAAAGATCCATATTAGCTAATGCATACTATATTTTTTTACGTCGTGCAATATGCATATCGATGATAATAAGTTAATAACACAAAATTATTAGATTACTAGTTGAAGAATCGTATATAGAAAGAATCGTAATTATATGTAGAATGATG - >AT3G25790.1
ATGATCCTTGAGAAACCCTATAGAGCCATATATACGTTGTCTTTATAAAGAGACATAACTCATCTCTTCTTGACTAACTTTATAGTTAAAGTTATCAATTATTCGAAAACAAAGCTGGTTTTTTGTTTTGTCCCTTAAACCAGCATGATCAAGAACTTAAGTAATATGAAGAATGACAATCAGAAACGTGAAAAATGTTGCGAGTACATCGAAGCTCTCGAAGAAGAACGTCGCAAGATCAATGTTTTCCAACGCGAGCTTCCTCTTTGCGTAGAGCTCGTGACTCAAGCGATTGAGGCGTATAAGAGGGAGATATCAGGGACGTCGACGGATAACTTATACGGACAGTCGGAGTGCTCAGAGCAGACCACCGGAGAATGTGGGCGCATCTTGGATCTGTTCATACCAATCAAACACTCTTCGACCTCCATAGAAGAAGAGGTTGATGACAAAGATGATGATGATGAAGAACACCAGTCTCATGAAACCGACATAGATTTTGATGACAAGAACATGAAATCTGAATGGCTCAAGTCTGTTCAGCTCTGGAACCAATCCGACGCAGTTGTTTCTAATAATAGACAGGATCGCTCACAAGAAAAGACAGAGACGCTGGTAGAGTTGATAAAAATAAACGATGAAGCAGCGAAGAAAAACAACAACATAAAATCACCGGTGACTACTAGCGATGGTGGCAGTGGCGGTGGCGGTGGCAGAAGAGGGCAGAGAAAGAATAGGCGGTGTTGGTCGCAAGAGTTACACAGACGCTTCTTGAACGCTCTTAAACAACTTGGTGGCCCTCATGTAGCTACGCCGAAACAGATAAGAGATATAATGAAGGTTGATGGGTTAACAAATGATGAAGTCAAAAGTCATTTACAGGTTAGTAAATCATATTCCATGAAAAATACATGTAACTAATATGTAAAAGGTATATATTAATTTCATCATTTTAGTTACAAATGTTTTTATAATTTAGAAGGAAAATAATATTTATTGTTTCATATTTTTTTTAATGATAAATAGAAATATAGGCTGCATGCAAGACGGCCAAGCCAAACAACACCGAACAACAGAAACTCTCAAACGCAACATTTCGTGGTGGTTGGTGGAATATGGGTCCCACAGACTAACCATTCAACGGCCAACGCAGTCAACGCCGTCGCATCGGGTGAGACCACCGGGATTTATGGGCCTATGGTCAGTTCGTTGCCGTCCGAGTGGCCGAGGCATTCCAATTTTGGTAGGAAGATTTCGGAAGATAGATCAAGATGCTCTAACAACGGATTTTTTCGGTGTAGCTCACCAGCTATGTCTTGTTCTACTCGTACAAAGACGAAAGATGCAAAAATAATATCATAAATTTAATTTTTGATTATTTATTAAGAGAAAAAAGTTATAGACATTAATATTGTGAAGAGTGTATATATATAGATGTTGGAGCGTGACTCTATGTTATTTTTAGTTTCTTGGTTTTTTTCTATTAGCCGATGATATCTTTGATCAAAGATCCATATTAGCTAATGCATACTATATTTTTTTACGTCGTGCAATATGCATATCGATGATAATAAGTTAATAACACAAAATTATTAGATTACTAGTTGAAGAATCGTATATAGAAAGAATCGTAATTATATGTAGAATGATG
CDS Sequence
- >AT3G25790.2
ATGATCAAGAACTTAAGTAATATGAAGAATGACAATCAGAAACGTGAAAAATGTTGCGAGTACATCGAAGCTCTCGAAGAAGAACGTCGCAAGATCAATGTTTTCCAACGCGAGCTTCCTCTTTGCGTAGAGCTCGTGACTCAAGCGATTGAGGCGTATAAGAGGGAGATATCAGGGACGTCGACGGATAACTTATACGGACAGTCGGAGTGCTCAGAGCAGACCACCGGAGAATGTGGGCGCATCTTGGATCTGTTCATACCAATCAAACACTCTTCGACCTCCATAGAAGAAGAGGTTGATGACAAAGATGATGATGATGAAGAACACCAGTCTCATGAAACCGACATAGATTTTGATGACAAGAACATGAAATCTGAATGGCTCAAGTCTGTTCAGCTCTGGAACCAATCCGACGCAGTTGTTTCTAATAATAGACAGGATCGCTCACAAGAAAAGACAGAGACGCTGGTAGAGTTGATAAAAATAAACGATGAAGCAGCGAAGAAAAACAACAACATAAAATCACCGGTGACTACTAGCGATGGTGGCAGTGGCGGTGGCGGTGGCAGAAGAGGGCAGAGAAAGAATAGGCGGTGTTGGTCGCAAGAGTTACACAGACGCTTCTTGAACGCTCTTAAACAACTTGGTGGCCCTCATGTAGCTACGCCGAAACAGATAAGAGATATAATGAAGGTTGATGGGTTAACAAATGATGAAGTCAAAAGTCATTTACAGGTTAGTAAATCATATTCCATGAAAAATACATGTAACTAA - >AT3G25790.1
ATGATCAAGAACTTAAGTAATATGAAGAATGACAATCAGAAACGTGAAAAATGTTGCGAGTACATCGAAGCTCTCGAAGAAGAACGTCGCAAGATCAATGTTTTCCAACGCGAGCTTCCTCTTTGCGTAGAGCTCGTGACTCAAGCGATTGAGGCGTATAAGAGGGAGATATCAGGGACGTCGACGGATAACTTATACGGACAGTCGGAGTGCTCAGAGCAGACCACCGGAGAATGTGGGCGCATCTTGGATCTGTTCATACCAATCAAACACTCTTCGACCTCCATAGAAGAAGAGGTTGATGACAAAGATGATGATGATGAAGAACACCAGTCTCATGAAACCGACATAGATTTTGATGACAAGAACATGAAATCTGAATGGCTCAAGTCTGTTCAGCTCTGGAACCAATCCGACGCAGTTGTTTCTAATAATAGACAGGATCGCTCACAAGAAAAGACAGAGACGCTGGTAGAGTTGATAAAAATAAACGATGAAGCAGCGAAGAAAAACAACAACATAAAATCACCGGTGACTACTAGCGATGGTGGCAGTGGCGGTGGCGGTGGCAGAAGAGGGCAGAGAAAGAATAGGCGGTGTTGGTCGCAAGAGTTACACAGACGCTTCTTGAACGCTCTTAAACAACTTGGTGGCCCTCATGTAGCTACGCCGAAACAGATAAGAGATATAATGAAGGTTGATGGGTTAACAAATGATGAAGTCAAAAGTCATTTACAGGTTAGTAAATCATATTCCATGAAAAATACATGTAACTAA
Protein Sequence
- >AT3G25790.2
MIKNLSNMKNDNQKREKCCEYIEALEEERRKINVFQRELPLCVELVTQAIEAYKREISGTSTDNLYGQSECSEQTTGECGRILDLFIPIKHSSTSIEEEVDDKDDDDEEHQSHETDIDFDDKNMKSEWLKSVQLWNQSDAVVSNNRQDRSQEKTETLVELIKINDEAAKKNNNIKSPVTTSDGGSGGGGGRRGQRKNRRCWSQELHRRFLNALKQLGGPHVATPKQIRDIMKVDGLTNDEVKSHLQVSKSYSMKNTCN - >AT3G25790.1
MIKNLSNMKNDNQKREKCCEYIEALEEERRKINVFQRELPLCVELVTQAIEAYKREISGTSTDNLYGQSECSEQTTGECGRILDLFIPIKHSSTSIEEEVDDKDDDDEEHQSHETDIDFDDKNMKSEWLKSVQLWNQSDAVVSNNRQDRSQEKTETLVELIKINDEAAKKNNNIKSPVTTSDGGSGGGGGRRGQRKNRRCWSQELHRRFLNALKQLGGPHVATPKQIRDIMKVDGLTNDEVKSHLQVSKSYSMKNTCN