Information report for AT3G25780
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
- shoot axis apex , root , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature and News
- Evidence supporting a role of jasmonic acid in Arabidopsis leaf senescence. DOI: 10.1104/pp.010843 ; PMID: 11891244
- Jasmonate biosynthesis and the allene oxide cyclase family of Arabidopsis thaliana. DOI: 10.1023/a:1023049319723 ; PMID: 12777050
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Localization of organelle proteins by isotope tagging (LOPIT). DOI: 10.1074/mcp.T400009-MCP200 ; PMID: 15295017
- Identification of plant glutaredoxin targets. DOI: 10.1089/ars.2005.7.919 ; PMID: 15998247
- Mapping the Arabidopsis organelle proteome. DOI: 10.1073/pnas.0506958103 ; PMID: 16618929
- and ethylene-inducing peptide from Fusarium oxysporum induces a complex cascade of transcripts associated with signal transduction and cell death in Arabidopsis. DOI: 10.1104/pp.106.076869 ; PMID: 16698904
- Different plant hormones regulate similar processes through largely nonoverlapping transcriptional responses. DOI: 10.1016/j.cell.2006.05.050 ; PMID: 16901781
- Identification of a peroxisomal acyl-activating enzyme involved in the biosynthesis of jasmonic acid in Arabidopsis. DOI: 10.1074/jbc.M607854200 ; PMID: 16963437
- Comprehensive transcriptional profiling of NaCl-stressed Arabidopsis roots reveals novel classes of responsive genes. DOI: 10.1186/1471-2229-6-25 ; PMID: 17038189
- Arabidopsis transcriptome changes in response to phloem-feeding silverleaf whitefly nymphs. Similarities and distinctions in responses to aphids. DOI: 10.1104/pp.106.090662 ; PMID: 17189325
- Temporal responses of transcripts, enzyme activities and metabolites after adding sucrose to carbon-deprived Arabidopsis seedlings. DOI: 10.1111/j.1365-313X.2006.02979.x ; PMID: 17217462
- AtPLAI is an acyl hydrolase involved in basal jasmonic acid production and Arabidopsis resistance to Botrytis cinerea. DOI: 10.1074/jbc.M700405200 ; PMID: 17475618
- The Arabidopsis E3 SUMO ligase SIZ1 regulates plant growth and drought responses. DOI: 10.1105/tpc.106.049981 ; PMID: 17905899
- The Arabidopsis SDG4 contributes to the regulation of pollen tube growth by methylation of histone H3 lysines 4 and 36 in mature pollen. DOI: 10.1016/j.ydbio.2007.12.016 ; PMID: 18252252
- Reduced V-ATPase activity in the trans-Golgi network causes oxylipin-dependent hypocotyl growth Inhibition in Arabidopsis. DOI: 10.1105/tpc.108.058362 ; PMID: 18441211
- An extensive (co-)expression analysis tool for the cytochrome P450 superfamily in Arabidopsis thaliana. DOI: 10.1186/1471-2229-8-47 ; PMID: 18433503
- Comparative transcriptome analysis of Arabidopsis thaliana infested by diamond back moth (Plutella xylostella) larvae reveals signatures of stress response, secondary metabolism, and signalling. DOI: 10.1186/1471-2164-9-154 ; PMID: 18400103
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Fusarium oxysporum hijacks COI1-mediated jasmonate signaling to promote disease development in Arabidopsis. DOI: 10.1111/j.1365-313X.2009.03831.x ; PMID: 19220788
- Systems analysis of seed filling in Arabidopsis: using general linear modeling to assess concordance of transcript and protein expression. DOI: 10.1104/pp.109.152413 ; PMID: 20118269
- and organ-specific promoter activities and in vivo heteromerization. DOI: 10.1093/jxb/ers261 ; PMID: 23028017
- Acyl-lipid metabolism. DOI: 10.1199/tab.0161 ; PMID: 23505340
- Activated expression of AtEDT1/HDG11 promotes lateral root formation in Arabidopsis mutant edt1 by upregulating jasmonate biosynthesis. DOI: 10.1111/jipb.12347 ; PMID: 25752924
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Activity Regulation by Heteromerization of Arabidopsis Allene Oxide Cyclase Family Members. DOI: 10.3390/plants5010003 ; PMID: 27135223
- Arabidopsis Pollen Fertility Requires the Transcription Factors CITF1 and SPL7 That Regulate Copper Delivery to Anthers and Jasmonic Acid Synthesis. DOI: 10.1105/tpc.17.00363 ; PMID: 29114014
- Extracellular ATP Shapes a Defense-Related Transcriptome Both Independently and along with Other Defense Signaling Pathways. DOI: 10.1104/pp.18.01301 ; PMID: 30630869
- Catalase, glutathione, and protein phosphatase 2A-dependent organellar redox signalling regulate aphid fecundity under moderate and high irradiance. DOI: 10.1111/pce.13669 ; PMID: 31702837
- Cloning of cDNAs for genes that are early-responsive to dehydration stress (ERDs) in Arabidopsis thaliana L.: identification of three ERDs as HSP cognate genes. DOI: 10.1007/BF00028874 ; PMID: 8075396
- Molecular cloning of allene oxide cyclase. The enzyme establishing the stereochemistry of octadecanoids and jasmonates. DOI: 10.1074/jbc.M002133200 ; PMID: 10764787
- Mapping the Arabidopsis organelle proteome. DOI: 10.1073/pnas.0506958103 ; PMID: 16618929
- A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. DOI: 10.1074/mcp.M600250-MCP200 ; PMID: 17151019
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- Comparative proteomic analysis of NaCl stress-responsive proteins in Arabidopsis roots. DOI: 10.1093/jxb/erm207 ; PMID: 17916636
Gene Resources
- UniProt: Q0WP37
- EMBL: AK229247
- AlphaFoldDB: Q0WP37
- EnsemblPlants: AT3G25780.1
- Gramene: AT3G25780.1
- KEGG: ath:AT3G25780
- Orthologous matrix: LYTGCLQ
- ExpressionAtlas: AT3G25780
- InterPro: IPR009410, IPR034871, IPR044859
- PANTHER: PTHR31843, PTHR31843:SF19
- SUPFAM: SSF141493
- Gene3D: 2.40.480.10
- OrthoDB: Q0WP37
- SWISS-MODEL: Q0WP37
Homologs
- Gossypium hirsutum GhAOC2A
- Oryza sativa OsAOC;OsAOC1
Sequences
cDNA Sequence
- >AT3G25780.1
AAAATTCTCTAGCTAACGCTTTTAGACAATTCGAAACCGAGTGGAAACTACACAAAGCATCTTTTGACATATACGCACGTGTTACTTCATCATCGTCCAATATAAATAGACTCATTACTAAACTCAACAACCATTAAAACCAAAGATCAATCTCTTCTTAATAGTCAATCATATATCAAAAAATTTAAACTCTTCTTGATCAATGGCTTCTTCTTCTGCTGCTATGTCTCTTGAATCCATCTCTATGACAACTCTCAACAATCTCTCTCGTAATCATCAATCTCACCGCAGTTCTCTTCTTGGTTTCTCAAGATCTTTCCAAAACCTTGGAATCTCATCTAACGGTCCAGATTTCTCCTCCCGATCAAGATCTACTACTTCCAAGAACCTCAACGTTACTCGAGCTTTCTTCTGGAATTGGGGCAAGAAGACCGAAAACTCCAGACCAAGTAAGATCCAAGAACTAAACGTGTATGAGCTCAACGAAGGAGATAGAAACAGTCCAGCAGTTCTTAAACTCGGCAAGAAACCAACAGAGCTTTGTCTCGGAGATCTCGTCCCATTCACAAACAAACTCTACACCGGCGATCTCAAGAAACGCGTGGGAATCACGGCAGGTCTCTGCGTTTTGATCCAACACGTTCCTGAAAAGAGCGGTGACAGATTCGAAGCTAGTTACAGCTTCTACTTTGGTGACTATGGTCACTTGTCTGTACAAGGACAATACTTGACTTATGAAGACACGTTCCTCGCTGTCACTGGTGGCTCTGGAATCTTTGAAGGTGCGTACGGACAGGTTAAGCTTCGTCAGCTTGTGTATCCGACAAAACTGTTCTACACTTTTTACCTTAAAGGGTTAGCTAATGATTTACCGCTGGAGCTTACTGGAACGGCGGTTACGCCGTCGAAGGATGTGAAACCGGCACCGGAAGCTAAGGCGATGGAGCCTAGTGGAGTTATAAGTAACTTTACTAATTAAGTAATTAGCTGTTTAATAGTTGTTTTGTTTTGTAATAGAATATTTTGATGAGTTGTGTGAGGTTAGTTAATGATGTGTTGAGGGAATAAAGTATTTATTTTGATGTGACTTTATTGATTACAACTGGTCTTTCTACAACGTGGAACTGTTGTACTCGATTTCAAAGTAAAACTTTTTACATTAGTTTCGGTATTTTCACGGAATAAATTGATAGCTAGAACCTTTAATCTTATGGTTTAAAATGGTACACTCATATACACAGTTAGGGTAGTGGAGTTAATGCTAGTAATTAGTAACACAATATTTTTTGGTTCGTTATGGTTTTGGTGTTAATTGTGTTAATGTCATAATGCTTTAACGCTAATTTGTTGTTGGCACAGATATTTAAAACTAAAAAAAGCAACCTAGTTATTGCTGGCTATCTTTTTAAATTGAGAAGTTAACATCTTGTCAAGTGAATCGTGTAATATTGTTATACTCTAAAGATCGATATTATTGTGTCTACCAGTCAAAACATGTGTTGGAGGGAAATTTTATTTGTAGGTTCATCATATGTCAGGAACATTATTGTCATGTTTCTGTAAGCTTTCTGACATTTAAGTTCAGATTTTGACCATAAGTTTTGATCATAAATGAGAAAAGAACAAAGTTAAGTTTAGTTTTGCGAATGTTAAAAAAAAT
CDS Sequence
- >AT3G25780.1
ATGGCTTCTTCTTCTGCTGCTATGTCTCTTGAATCCATCTCTATGACAACTCTCAACAATCTCTCTCGTAATCATCAATCTCACCGCAGTTCTCTTCTTGGTTTCTCAAGATCTTTCCAAAACCTTGGAATCTCATCTAACGGTCCAGATTTCTCCTCCCGATCAAGATCTACTACTTCCAAGAACCTCAACGTTACTCGAGCTTTCTTCTGGAATTGGGGCAAGAAGACCGAAAACTCCAGACCAAGTAAGATCCAAGAACTAAACGTGTATGAGCTCAACGAAGGAGATAGAAACAGTCCAGCAGTTCTTAAACTCGGCAAGAAACCAACAGAGCTTTGTCTCGGAGATCTCGTCCCATTCACAAACAAACTCTACACCGGCGATCTCAAGAAACGCGTGGGAATCACGGCAGGTCTCTGCGTTTTGATCCAACACGTTCCTGAAAAGAGCGGTGACAGATTCGAAGCTAGTTACAGCTTCTACTTTGGTGACTATGGTCACTTGTCTGTACAAGGACAATACTTGACTTATGAAGACACGTTCCTCGCTGTCACTGGTGGCTCTGGAATCTTTGAAGGTGCGTACGGACAGGTTAAGCTTCGTCAGCTTGTGTATCCGACAAAACTGTTCTACACTTTTTACCTTAAAGGGTTAGCTAATGATTTACCGCTGGAGCTTACTGGAACGGCGGTTACGCCGTCGAAGGATGTGAAACCGGCACCGGAAGCTAAGGCGATGGAGCCTAGTGGAGTTATAAGTAACTTTACTAATTAA
Protein Sequence
- >AT3G25780.1
MASSSAAMSLESISMTTLNNLSRNHQSHRSSLLGFSRSFQNLGISSNGPDFSSRSRSTTSKNLNVTRAFFWNWGKKTENSRPSKIQELNVYELNEGDRNSPAVLKLGKKPTELCLGDLVPFTNKLYTGDLKKRVGITAGLCVLIQHVPEKSGDRFEASYSFYFGDYGHLSVQGQYLTYEDTFLAVTGGSGIFEGAYGQVKLRQLVYPTKLFYTFYLKGLANDLPLELTGTAVTPSKDVKPAPEAKAMEPSGVISNFTN