Gene Details:
- Gene ID: AT3G25150
- Gene Symbol: AtG3BP-3, AtG3BP6
- Gene Name:
- Description: Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , guard cell
Literature:
- Impact of AtNHX1, a vacuolar Na+/H+ antiporter, upon gene expression during and long-term salt stress in Arabidopsis thaliana. DOI: 10.1186/1471-2229-7-18 ; PMID: 17411438
- The Arabidopsis homolog of human G3BP1 is a key regulator of stomatal and apoplastic immunity. DOI: 10.26508/lsa.201800046 ; PMID: 30456348
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- Analyzing the G3BP-like gene family of Arabidopsis thaliana in early turnip mosaic virus infection. DOI: 10.1038/s41598-021-81276-7 ; PMID: 33500425
- Arabidopsis thaliana G3BP Ortholog Rescues Mammalian Stress Granule Phenotype across Kingdoms. DOI: 10.3390/ijms22126287 ; PMID: 34208100
- Comprehensive evolutionary analysis and nomenclature of plant G3BPs. DOI: 10.26508/lsa.202101328 ; PMID: 35618429
Sequences:
cDNA Sequence
- >AT3G25150.1
TACAGATATAAACTCTAAAGCCACTTTTTTTTCTTCTTCTTCCATTTTTTTGTTCTCACGTCGCTCTCTCTTTTTTTCGAGATTCAGCTGTAAAACCCTAACTAGCGCCATAGCCAAGGAAGCTTTCCTCAGATCGTCTCTCCGAAATTTTCCGGTTAATCGTCAGTTAAGGGGAAAATTAGGCTATGGCGATGTTAGGTGCACAGCAAGTTCCAGCAGCAGCTTGTACTCCAGATATGGTTGGGAATGCTTTTGTGCCCCAGTATTATCACATATTGCATCAATCACCTGAGCATGTTCACAGATTTTACCAAGAGATTAGCAAGTTAGGTCGTCCTGAAGAGAATGGTTTAATGAGCATCACTTCTACCTTGCAAGCTATTGACAAGAAGATAATGGCGCTTGGTTACGGTGTAATCAGTGCAGAGATAGCTACTGTGGACACACAAGAATCTCATGGAGGTGGTTATATTGTACTGGTGACTGGGTATTTGACGGGAAAAGACAGTGTCAGGAGGACGTTTAGTCAGACCTTCTTCCTTGCTCCACAGGAGACAGGATACTTTGTCTTGAATGATATGTTTCGATTCATTGATGAAGGCACTGTCGTACATGGAAATCAGATTCCAGTGAACAACGTCCAAGCTCCTGTCAACACTTACCAGGACACAGCTGCTGCGAAGGAAATTCCAGATGACTTTGTTCAGGAGAAATATGTCCAAGAGAATCATGCTGTTAAGCAAACCGAGGTGTTGTCCAAGAGCATTAATGAGCCTGAAAAAGTGTTCACGCCCTCTGAAGATGAACAAGTATCAGCTGCAGAAGAAGCTCTGGTGACTGAAACAGTTAATGAAGCACCAATTGAAGTGCAAAAGGTTGGAGAATCTGATTCTAGGACTGGCGAAATTCCAAAGAGATCTTATGCATCAATTGTGAAGGTTATGAAAGAAAATGCTGCACCAATGTCTGCTTCGAGAACTCCAACAAAGGTGGAACCAAAGAAACAAGAAGATCAAGCCATTCATATCCCTCTACCAACACCATTGTCTGAGAAATCAGATTCAGGAGCAAATGTTGCTGTAAATGAGAACAATCAAGAGAATGAAAGAGCTCTAGGTCCATCCATCTATCTAAAGGGTTTACCCCTTGATGCAACACCTGCCTTGCTTGAGAATGAGTTCCAGAAATTTGGACTTATTAGGACCAATGGAATTCAAGTGAGAAGCCAGAAGGGATTCTGTTTTGGTTTTGTTGAGTTTGAATCCGCAAGTTCCATGCAAAGCGCTATCGAGGCATCACCTGTCATGCTCAATGGACACAAAGTTGTTGTGGAGGAAAAGCGATCTACCGCAAGAGGGAACTATAGAGGACGTTCGACGTTTGGTGTAAACACAGGCTACAGAAACGAAGGAGGAAGGGGTCGTGGGAGCTTTGGAGGTGGAAGAGGAGGATATGGCCGGACCGATTTCAACGGATATGGTAATAACAGGGGAAACAATAGAGGCGGATACGCAAACCGAGCAAATGGTGATGGTGGTGGGTTCCCGAGGGCCAATGGTAACAATGGACGAGTAAGACGTGGTGGCGGAAATGATGCTAACAGAGCTACGAAACCCGTGGATGATGCTCCCCGTGTGTCTGTTGCTGCGTAAATGTGCTTTTGAAACAAAAAGCTCTATTGGTTTTAGAGAGTTTAGGCGTAGAGCAATGGCAAAAAAAAACACTATTATTTTCTTTTCACTGTGTCGCCATTTTATTAATTGGAGTCAAAACTTGAGAGCAAGAGAGAGTTTCGTCGGTTCTTGCTTGTCTATTTTTTCTTCACTGCTAATGAAATCTCTTTCTTCATGTGGCTCATTCTAAGTTTTACTGATTCTGAATTTCTTTTCTCGAGACTGATCATAAGGGAAATGTAGAATTAGCAAAGCAGTTATGAATCTCATAATACGATGTCAAACAATTTAAAATGGCATAATGTGACTTTATAATTA - >AT3G25150.2
TACAGATATAAACTCTAAAGCCACTTTTTTTTCTTCTTCTTCCATTTTTTTGTTCTCACGTCGCTCTCTCTTTTTTTCGAGATTCAGCTGTAAAACCCTAACTAGCGCCATAGCCAAGGAAGCTTTCCTCAGATCGTCTCTCCGAAATTTTCCGGTTAATCGTCAGTTAAGGGGAAAATTAGGCTATGGCGATGTTAGGTGCACAGCAAGTTCCAGCAGCAGCTTGTACTCCAGATATGGTTGGGAATGCTTTTGTGCCCCAGTATTATCACATATTGCATCAATCACCTGAGCATGTTCACAGATTTTACCAAGAGATTAGCAAGTTAGGTCGTCCTGAAGAGAATGGTTTAATGAGCATCACTTCTACCTTGCAAGCTATTGACAAGAAGATAATGGCGCTTGGTTACGGTGTAATCAGTGCAGAGATAGCTACTGTGGACACACAAGAATCTCATGGAGGTGGTTATATTGTACTGGTGACTGGGTATTTGACGGGAAAAGACAGTGTCAGGAGGACGTTTAGTCAGACCTTCTTCCTTGCTCCACAGGAGACAGGATACTTTGTCTTGAATGATATGTTTCGATTCATTGATGAAGGCACTGTCGTACATGGAAATCAGATTCCAGTGAACAACGTCCAAGCTCCTGTCAACACTTACCAGGACACAGCTGCTGCGAAGGAAATTCCAGATGACTTTGTTCAGGAGAAATATGTCCAAGAGAATCATGCTGTTAAGCAAACCGAGGTGTTGTCCAAGAGCATTAATGAGCCTGAAAAAGTGTTCACGCCCTCTGAAGATGAACAAGTATCAGCTGCAGAAGAAGCTCTGGTGACTGAAACAGTTAATGAAGCACCAATTGAAGTGCAAAAGGTTGGAGAATCTGATTCTAGGACTGGCGAAATTCCAAAGAGATCTTATGCATCAATTGTGAAGGTTATGAAAGAAAATGCTGCACCAATGTCTGCTTCGAGAACTCCAACAAAGGTGGAACCAAAGAAACAAGAAGATCAAGCCATTCATATCCCTCTACCAACACCATTGTCTGAGAAATCAGATTCAGGAGCAAATGTTGCTGTAAATGAGAACAATCAAGAGAATGAAAGAGCTCTAGGTCCATCCATCTATCTAAAGGGTTTACCCCTTGATGCAACACCTGCCTTGCTTGAGAATGAGTTCCAGAAATTTGGACTTATTAGGACCAATGGAATTCAAGTGAGAAGCCAGAAGGGATTCTGTTTTGGTTTTGTTGAGTTTGAATCCGCAAGTTCCATGCAAAGCGCTATCGAGGCATCACCTGTCATGCTCAATGGACACAAAGTTGTTGTGGAGGAAAAGCGATCTACCGCAAGAGGGAACTATAGAGGACGTTCGACGTTTGGTGTAAACACAGGCTACAGAAACGAAGGAGGAAGGGGTCGTGGGAGCTTTGGAGGTGGAAGAGGAGGATATGGCCGGACCGATTTCAACGGATATGGTAATAACAGGGGAAACAATAGAGGCGGATACGCAAACCGAGCAAATGGTGATGGTGGTGGGTTCCCGAGGGCCAATGGTAACAATGGACGAGTAAGACGTGGTGGCGGAAATGATGCTAACAGAGCTACGAAACCCGTGGATGATGCTCCCCGTGTGTCTGTTGCTGCGTAAATGTGCTTTTGAAACAAAAAGCTCTATTGGTTTTAGAGAGTTTAGGCGTAGAGCAATGGCAAAAAAAAACACTATTATTTTCTTTTCACTGTGTCGCCATTTTATTAATTGGAGTCAAAACTTGAGAGCAAGAGAGAGTTTCGTCGGTTCTTGCTTGTCTATTTTTTCTTCACTGCTAATGAAATCTCTTTCTTCATGTGGCTCATTCTAAGTTTTACTGATTCTGAATTTCTTTTCTCGAGACTGATCATAAGGGAAATGTAGAATTAGCAAAGCAGTTATGAATCTCATAATACGATGTCAAACAATTTAAAATGGCATAATGTGACTTTATAATTA
CDS Sequence
- >AT3G25150.1
ATGGCGATGTTAGGTGCACAGCAAGTTCCAGCAGCAGCTTGTACTCCAGATATGGTTGGGAATGCTTTTGTGCCCCAGTATTATCACATATTGCATCAATCACCTGAGCATGTTCACAGATTTTACCAAGAGATTAGCAAGTTAGGTCGTCCTGAAGAGAATGGTTTAATGAGCATCACTTCTACCTTGCAAGCTATTGACAAGAAGATAATGGCGCTTGGTTACGGTGTAATCAGTGCAGAGATAGCTACTGTGGACACACAAGAATCTCATGGAGGTGGTTATATTGTACTGGTGACTGGGTATTTGACGGGAAAAGACAGTGTCAGGAGGACGTTTAGTCAGACCTTCTTCCTTGCTCCACAGGAGACAGGATACTTTGTCTTGAATGATATGTTTCGATTCATTGATGAAGGCACTGTCGTACATGGAAATCAGATTCCAGTGAACAACGTCCAAGCTCCTGTCAACACTTACCAGGACACAGCTGCTGCGAAGGAAATTCCAGATGACTTTGTTCAGGAGAAATATGTCCAAGAGAATCATGCTGTTAAGCAAACCGAGGTGTTGTCCAAGAGCATTAATGAGCCTGAAAAAGTGTTCACGCCCTCTGAAGATGAACAAGTATCAGCTGCAGAAGAAGCTCTGGTGACTGAAACAGTTAATGAAGCACCAATTGAAGTGCAAAAGGTTGGAGAATCTGATTCTAGGACTGGCGAAATTCCAAAGAGATCTTATGCATCAATTGTGAAGGTTATGAAAGAAAATGCTGCACCAATGTCTGCTTCGAGAACTCCAACAAAGGTGGAACCAAAGAAACAAGAAGATCAAGCCATTCATATCCCTCTACCAACACCATTGTCTGAGAAATCAGATTCAGGAGCAAATGTTGCTGTAAATGAGAACAATCAAGAGAATGAAAGAGCTCTAGGTCCATCCATCTATCTAAAGGGTTTACCCCTTGATGCAACACCTGCCTTGCTTGAGAATGAGTTCCAGAAATTTGGACTTATTAGGACCAATGGAATTCAAGTGAGAAGCCAGAAGGGATTCTGTTTTGGTTTTGTTGAGTTTGAATCCGCAAGTTCCATGCAAAGCGCTATCGAGGCATCACCTGTCATGCTCAATGGACACAAAGTTGTTGTGGAGGAAAAGCGATCTACCGCAAGAGGGAACTATAGAGGACGTTCGACGTTTGGTGTAAACACAGGCTACAGAAACGAAGGAGGAAGGGGTCGTGGGAGCTTTGGAGGTGGAAGAGGAGGATATGGCCGGACCGATTTCAACGGATATGGTAATAACAGGGGAAACAATAGAGGCGGATACGCAAACCGAGCAAATGGTGATGGTGGTGGGTTCCCGAGGGCCAATGGTAACAATGGACGAGTAAGACGTGGTGGCGGAAATGATGCTAACAGAGCTACGAAACCCGTGGATGATGCTCCCCGTGTGTCTGTTGCTGCGTAA - >AT3G25150.2
ATGGCGATGTTAGGTGCACAGCAAGTTCCAGCAGCAGCTTGTACTCCAGATATGGTTGGGAATGCTTTTGTGCCCCAGTATTATCACATATTGCATCAATCACCTGAGCATGTTCACAGATTTTACCAAGAGATTAGCAAGTTAGGTCGTCCTGAAGAGAATGGTTTAATGAGCATCACTTCTACCTTGCAAGCTATTGACAAGAAGATAATGGCGCTTGGTTACGGTGTAATCAGTGCAGAGATAGCTACTGTGGACACACAAGAATCTCATGGAGGTGGTTATATTGTACTGGTGACTGGGTATTTGACGGGAAAAGACAGTGTCAGGAGGACGTTTAGTCAGACCTTCTTCCTTGCTCCACAGGAGACAGGATACTTTGTCTTGAATGATATGTTTCGATTCATTGATGAAGGCACTGTCGTACATGGAAATCAGATTCCAGTGAACAACGTCCAAGCTCCTGTCAACACTTACCAGGACACAGCTGCTGCGAAGGAAATTCCAGATGACTTTGTTCAGGAGAAATATGTCCAAGAGAATCATGCTGTTAAGCAAACCGAGGTGTTGTCCAAGAGCATTAATGAGCCTGAAAAAGTGTTCACGCCCTCTGAAGATGAACAAGTATCAGCTGCAGAAGAAGCTCTGGTGACTGAAACAGTTAATGAAGCACCAATTGAAGTGCAAAAGGTTGGAGAATCTGATTCTAGGACTGGCGAAATTCCAAAGAGATCTTATGCATCAATTGTGAAGGTTATGAAAGAAAATGCTGCACCAATGTCTGCTTCGAGAACTCCAACAAAGGTGGAACCAAAGAAACAAGAAGATCAAGCCATTCATATCCCTCTACCAACACCATTGTCTGAGAAATCAGATTCAGGAGCAAATGTTGCTGTAAATGAGAACAATCAAGAGAATGAAAGAGCTCTAGGTCCATCCATCTATCTAAAGGGTTTACCCCTTGATGCAACACCTGCCTTGCTTGAGAATGAGTTCCAGAAATTTGGACTTATTAGGACCAATGGAATTCAAGTGAGAAGCCAGAAGGGATTCTGTTTTGGTTTTGTTGAGTTTGAATCCGCAAGTTCCATGCAAAGCGCTATCGAGGCATCACCTGTCATGCTCAATGGACACAAAGTTGTTGTGGAGGAAAAGCGATCTACCGCAAGAGGGAACTATAGAGGACGTTCGACGTTTGGTGTAAACACAGGCTACAGAAACGAAGGAGGAAGGGGTCGTGGGAGCTTTGGAGGTGGAAGAGGAGGATATGGCCGGACCGATTTCAACGGATATGGTAATAACAGGGGAAACAATAGAGGCGGATACGCAAACCGAGCAAATGGTGATGGTGGTGGGTTCCCGAGGGCCAATGGTAACAATGGACGAGTAAGACGTGGTGGCGGAAATGATGCTAACAGAGCTACGAAACCCGTGGATGATGCTCCCCGTGTGTCTGTTGCTGCGTAA
Protein Sequence
- >AT3G25150.1
MAMLGAQQVPAAACTPDMVGNAFVPQYYHILHQSPEHVHRFYQEISKLGRPEENGLMSITSTLQAIDKKIMALGYGVISAEIATVDTQESHGGGYIVLVTGYLTGKDSVRRTFSQTFFLAPQETGYFVLNDMFRFIDEGTVVHGNQIPVNNVQAPVNTYQDTAAAKEIPDDFVQEKYVQENHAVKQTEVLSKSINEPEKVFTPSEDEQVSAAEEALVTETVNEAPIEVQKVGESDSRTGEIPKRSYASIVKVMKENAAPMSASRTPTKVEPKKQEDQAIHIPLPTPLSEKSDSGANVAVNENNQENERALGPSIYLKGLPLDATPALLENEFQKFGLIRTNGIQVRSQKGFCFGFVEFESASSMQSAIEASPVMLNGHKVVVEEKRSTARGNYRGRSTFGVNTGYRNEGGRGRGSFGGGRGGYGRTDFNGYGNNRGNNRGGYANRANGDGGGFPRANGNNGRVRRGGGNDANRATKPVDDAPRVSVAA - >AT3G25150.2
MAMLGAQQVPAAACTPDMVGNAFVPQYYHILHQSPEHVHRFYQEISKLGRPEENGLMSITSTLQAIDKKIMALGYGVISAEIATVDTQESHGGGYIVLVTGYLTGKDSVRRTFSQTFFLAPQETGYFVLNDMFRFIDEGTVVHGNQIPVNNVQAPVNTYQDTAAAKEIPDDFVQEKYVQENHAVKQTEVLSKSINEPEKVFTPSEDEQVSAAEEALVTETVNEAPIEVQKVGESDSRTGEIPKRSYASIVKVMKENAAPMSASRTPTKVEPKKQEDQAIHIPLPTPLSEKSDSGANVAVNENNQENERALGPSIYLKGLPLDATPALLENEFQKFGLIRTNGIQVRSQKGFCFGFVEFESASSMQSAIEASPVMLNGHKVVVEEKRSTARGNYRGRSTFGVNTGYRNEGGRGRGSFGGGRGGYGRTDFNGYGNNRGNNRGGYANRANGDGGGFPRANGNNGRVRRGGGNDANRATKPVDDAPRVSVAA