Information report for AT3G25140
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0005417 — phloem — floema (Spanish, exact), portion of phloem tissue (exact), 師部、師管 (Japanese, exact)
- PO:0005421 — parenchyma — parénquima (Spanish, exact), portion of parenchyma tissue (exact), portion of parenchymatous tissue (exact), 柔組織 (Japanese, exact)
Functional Keywords
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , phloem , parenchyma
Literature and News
- Mutation of a family 8 glycosyltransferase gene alters cell wall carbohydrate composition and causes a humidity-sensitive semi-sterile dwarf phenotype in Arabidopsis. DOI: 10.1023/B:PLAN.0000019074.60542.6c ; PMID: 15010604
- The hydrophobic proteome of mitochondrial membranes from Arabidopsis cell suspensions. DOI: 10.1016/j.phytochem.2004.03.028 ; PMID: 15276431
- Localization of organelle proteins by isotope tagging (LOPIT). DOI: 10.1074/mcp.T400009-MCP200 ; PMID: 15295017
- Biosynthesis of cellulose-enriched tension wood in Populus: global analysis of transcripts and metabolites identifies biochemical and developmental regulators in secondary wall biosynthesis. DOI: 10.1111/j.1365-313X.2005.02584.x ; PMID: 16367961
- Functional identification of an Arabidopsis pectin biosynthetic homogalacturonan galacturonosyltransferase. DOI: 10.1073/pnas.0600120103 ; PMID: 16540543
- Mapping the Arabidopsis organelle proteome. DOI: 10.1073/pnas.0506958103 ; PMID: 16618929
- The Arabidopsis thaliana transcriptome in response to Agrobacterium tumefaciens. DOI: 10.1094/MPMI-19-0665 ; PMID: 16776300
- Interactions between MUR10/CesA7-dependent secondary cellulose biosynthesis and primary cell wall structure. DOI: 10.1104/pp.106.087700 ; PMID: 17041031
- Formation and separation of root border cells. DOI: 10.1016/j.tplants.2006.11.003 ; PMID: 17157548
- Transcriptional profiling of mature Arabidopsis trichomes reveals that NOECK encodes the MIXTA-like transcriptional regulator MYB106. DOI: 10.1104/pp.108.126979 ; PMID: 18805951
- Novel implementation of conditional co-regulation by graph theory to derive co-expressed genes from microarray data. DOI: 10.1186/1471-2105-9-S9-S7 ; PMID: 18793471
- Thaxtomin A affects CESA-complex density, expression of cell wall genes, cell wall composition, and causes ectopic lignification in Arabidopsis thaliana seedlings. DOI: 10.1093/jxb/ern344 ; PMID: 19269997
- The organization pattern of root border-like cells of Arabidopsis is dependent on cell wall homogalacturonan. DOI: 10.1104/pp.109.136382 ; PMID: 19448034
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- [Expression and functional analyses of the Arabidopsis QUA1 gene in light signal transduction]. DOI: 10.16288/j.yczz.15-456 ; PMID: 27232492
- Cell adhesion in plants is under the control of putative O-fucosyltransferases. DOI: 10.1242/dev.132308 ; PMID: 27317803
- The hydrophobic proteome of mitochondrial membranes from Arabidopsis cell suspensions. DOI: 10.1016/j.phytochem.2004.03.028 ; PMID: 15276431
- Mapping the Arabidopsis organelle proteome. DOI: 10.1073/pnas.0506958103 ; PMID: 16618929
- Homogalacturonan synthesis in Arabidopsis thaliana requires a Golgi-localized protein with a putative methyltransferase domain. DOI: 10.1111/j.1365-313X.2007.03086.x ; PMID: 17425712
- Separating Golgi Proteins from Cis to Trans Reveals Underlying Properties of Cisternal Localization. DOI: 10.1105/tpc.19.00081 ; PMID: 31266899
Gene Resources
- UniProt: W8PVC6
- EMBL: KJ138811
- AlphaFoldDB: W8PVC6
- EnsemblPlants: AT3G25140.1
- Gramene: AT3G25140.1
- KEGG: ath:AT3G25140
- Orthologous matrix: QADDHRN
- ExpressionAtlas: AT3G25140
- InterPro: IPR002495, IPR029044, IPR029993
- PANTHER: PTHR32116, PTHR32116:SF31
- SUPFAM: SSF53448
- Gene3D: 3.90.550.10
- SWISS-MODEL: W8PVC6
- Conserved Domain Database: cd06429
Homologs
- Actinidia chinensis Achn244501, Achn293031
- Oryza sativa OsPDT1, OsGAUT4, LOC_Os09g36180, OsGAUT21
- Prunus avium Pav_sc0000412.1_g540.1.mk
- Sesamum indicum SIN_1014576
Sequences
cDNA Sequence
- >AT3G25140.1
CAGATTTGAATCTCAGATCTGATATAAAAATTCACTAATCGACAACATTTTACTACAAAATTTAATAGAAAGTCAAAATATGATTGTTACACTTCAATTAACTTAAAAAAAGTTGAAAAAATGGTTACCGACATATTTCATAGTTTGGCCGCGTACGATTAGTGAGACACTCCATTAAATAGCTTATAATTGAAAATTGAATGACACTGTGAGATTCAAGTGTAAAGTGCTCTCTCCCCAATGGCTAATCACCACCGACTTTTACGCGGCGGCGGATCTCCGGCCATAATCGGTGGCAGAATCACACTCACAGCTTTCGCTTCCACTATCGCACTCTTCCTCTTCACTCTCTCCTTCTTCTTCGCTTCAGATTCTAACGATTCTCCTGATCTCCTTCTTCCCGGTGTTGAGTACTCTAATGGAGTCGGATCTAGAAGATCCATGTTGGATATCAAATCGGATCCGCTTAAGCCACGGTTGATTCAGATCCGGAAACAAGCTGATGATCATCGGTCATTAGCATTAGCTTATGCTTCTTACGCGAGAAAGCTTAAGCTCGAGAATTCGAAACTCGTCAGGATCTTCGCTGATCTTTCGAGGAATTACACGGATCTGATTAACAAACCGACGTATCGAGCTTTGTATGATTCTGATGGAGCCTCGATTGAAGAATCTGTGCTTAGGCAATTTGAGAAAGAAGTTAAGGAACGGATTAAAATGACTCGTCAAGTGATTGCTGAAGCTAAAGAGTCTTTTGATAATCAGTTGAAGATTCAGAAGCTGAAAGATACGATTTTCGCTGTTAACGAACAGTTAACTAATGCTAAGAAGCAAGGTGCGTTTTCGAGTTTGATCGCTGCGAAATCGATTCCGAAAGGATTGCATTGTCTTGCTATGAGGCTGATGGAAGAGAGGATTGCTCACCCTGAGAAGTATACTGATGAAGGGAAAGATAGACCGCGGGAGCTCGAGGATCCGAATCTTTACCATTACGCTATATTTTCGGATAATGTGATTGCGGCTTCGGTGGTTGTGAACTCTGCTGTGAAGAATGCTAAGGAGCCGTGGAAGCATGTTTTTCACGTTGTGACTGATAAGATGAATCTTGGAGCTATGCAGGTTATGTTTAAACTGAAGGAGTATAAAGGAGCTCATGTAGAAGTTAAAGCTGTTGAGGATTATACGTTTTTGAACTCTTCGTATGTGCCTGTGTTGAAGCAGTTAGAATCTGCGAATCTTCAGAAGTTTTATTTCGAGAATAAGCTCGAGAATGCGACGAAAGATACCACGAATATGAAGTTCAGGAACCCCAAGTATTTATCTATATTGAATCACTTGAGGTTTTATTTACCCGAGATGTACCCGAAACTACATAGGATACTGTTTTTGGACGATGATGTGGTTGTGCAGAAGGATTTAACGGGTCTGTGGGAGATTGATATGGATGGGAAAGTGAATGGAGCTGTAGAGACTTGTTTTGGGTCGTTTCATCGGTACGCTCAATACATGAATTTCTCACATCCTTTGATCAAAGAGAAGTTTAATCCCAAAGCATGTGCGTGGGCGTATGGAATGAACTTCTTTGATCTTGATGCTTGGAGAAGAGAGAAGTGCACAGAAGAATATCACTACTGGCAAAATCTGAACGAGAACAGGGCTCTATGGAAACTGGGGACGTTACCACCGGGACTGATCACCTTTTACTCAACCACAAAGCCGCTGGACAAATCATGGCATGTGCTTGGGCTGGGTTACAATCCGAGCATTAGCATGGATGAGATCCGCAACGCTGCAGTGGTACACTTCAACGGTAACATGAAGCCATGGCTTGACATAGCTATGAACCAGTTTCGACCACTTTGGACCAAACACGTCGACTATGACCTCGAGTTTGTTCAGGCTTGCAATTTTGGCCTCTGAACTATGAAAATTTTCTTTATCATCAAAATCTGAAAGCATATGTTGTTTGTTACTTCAGCTCTACGAAGTTTTAACCTTAGTTTTTGTTTGTGTTTATTTATATATTTTTGGGGGTTTAGTAGAACACTTGTATTTTGTTCATAGCTATCTTTGTTCTATGGCAACCTATAATCAAAGCTTAATTATAAAGTCACATTATGCCATTTTAAATTGTTTGACATCGTATTATGAGATTCATAACTGCTTTGCTAATTCTACATTTCCCTTATGATCAGTCTCGAGAAAAGAAATTCAGAATCAGTAAAACTTAGAATGAGCCACATGAAGAAAGAGATTTCATTAGCAGTGAAGAAAAAATAGACAAGCAAGA
CDS Sequence
- >AT3G25140.1
ATGGCTAATCACCACCGACTTTTACGCGGCGGCGGATCTCCGGCCATAATCGGTGGCAGAATCACACTCACAGCTTTCGCTTCCACTATCGCACTCTTCCTCTTCACTCTCTCCTTCTTCTTCGCTTCAGATTCTAACGATTCTCCTGATCTCCTTCTTCCCGGTGTTGAGTACTCTAATGGAGTCGGATCTAGAAGATCCATGTTGGATATCAAATCGGATCCGCTTAAGCCACGGTTGATTCAGATCCGGAAACAAGCTGATGATCATCGGTCATTAGCATTAGCTTATGCTTCTTACGCGAGAAAGCTTAAGCTCGAGAATTCGAAACTCGTCAGGATCTTCGCTGATCTTTCGAGGAATTACACGGATCTGATTAACAAACCGACGTATCGAGCTTTGTATGATTCTGATGGAGCCTCGATTGAAGAATCTGTGCTTAGGCAATTTGAGAAAGAAGTTAAGGAACGGATTAAAATGACTCGTCAAGTGATTGCTGAAGCTAAAGAGTCTTTTGATAATCAGTTGAAGATTCAGAAGCTGAAAGATACGATTTTCGCTGTTAACGAACAGTTAACTAATGCTAAGAAGCAAGGTGCGTTTTCGAGTTTGATCGCTGCGAAATCGATTCCGAAAGGATTGCATTGTCTTGCTATGAGGCTGATGGAAGAGAGGATTGCTCACCCTGAGAAGTATACTGATGAAGGGAAAGATAGACCGCGGGAGCTCGAGGATCCGAATCTTTACCATTACGCTATATTTTCGGATAATGTGATTGCGGCTTCGGTGGTTGTGAACTCTGCTGTGAAGAATGCTAAGGAGCCGTGGAAGCATGTTTTTCACGTTGTGACTGATAAGATGAATCTTGGAGCTATGCAGGTTATGTTTAAACTGAAGGAGTATAAAGGAGCTCATGTAGAAGTTAAAGCTGTTGAGGATTATACGTTTTTGAACTCTTCGTATGTGCCTGTGTTGAAGCAGTTAGAATCTGCGAATCTTCAGAAGTTTTATTTCGAGAATAAGCTCGAGAATGCGACGAAAGATACCACGAATATGAAGTTCAGGAACCCCAAGTATTTATCTATATTGAATCACTTGAGGTTTTATTTACCCGAGATGTACCCGAAACTACATAGGATACTGTTTTTGGACGATGATGTGGTTGTGCAGAAGGATTTAACGGGTCTGTGGGAGATTGATATGGATGGGAAAGTGAATGGAGCTGTAGAGACTTGTTTTGGGTCGTTTCATCGGTACGCTCAATACATGAATTTCTCACATCCTTTGATCAAAGAGAAGTTTAATCCCAAAGCATGTGCGTGGGCGTATGGAATGAACTTCTTTGATCTTGATGCTTGGAGAAGAGAGAAGTGCACAGAAGAATATCACTACTGGCAAAATCTGAACGAGAACAGGGCTCTATGGAAACTGGGGACGTTACCACCGGGACTGATCACCTTTTACTCAACCACAAAGCCGCTGGACAAATCATGGCATGTGCTTGGGCTGGGTTACAATCCGAGCATTAGCATGGATGAGATCCGCAACGCTGCAGTGGTACACTTCAACGGTAACATGAAGCCATGGCTTGACATAGCTATGAACCAGTTTCGACCACTTTGGACCAAACACGTCGACTATGACCTCGAGTTTGTTCAGGCTTGCAATTTTGGCCTCTGA
Protein Sequence
- >AT3G25140.1
MANHHRLLRGGGSPAIIGGRITLTAFASTIALFLFTLSFFFASDSNDSPDLLLPGVEYSNGVGSRRSMLDIKSDPLKPRLIQIRKQADDHRSLALAYASYARKLKLENSKLVRIFADLSRNYTDLINKPTYRALYDSDGASIEESVLRQFEKEVKERIKMTRQVIAEAKESFDNQLKIQKLKDTIFAVNEQLTNAKKQGAFSSLIAAKSIPKGLHCLAMRLMEERIAHPEKYTDEGKDRPRELEDPNLYHYAIFSDNVIAASVVVNSAVKNAKEPWKHVFHVVTDKMNLGAMQVMFKLKEYKGAHVEVKAVEDYTFLNSSYVPVLKQLESANLQKFYFENKLENATKDTTNMKFRNPKYLSILNHLRFYLPEMYPKLHRILFLDDDVVVQKDLTGLWEIDMDGKVNGAVETCFGSFHRYAQYMNFSHPLIKEKFNPKACAWAYGMNFFDLDAWRREKCTEEYHYWQNLNENRALWKLGTLPPGLITFYSTTKPLDKSWHVLGLGYNPSISMDEIRNAAVVHFNGNMKPWLDIAMNQFRPLWTKHVDYDLEFVQACNFGL