Gene Details:
- Gene ID: AT3G25110
- Gene Symbol: AtFaTA, FaTA, FATA1
- Gene Name: fatA acyl-ACP thioesterase, fatA acyl-ACP thioesterase, fatA acyl-ACP thioesterase 1
- Description: fatA acyl-ACP thioesterase;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure
Literature:
- Genomic evidence for COP1 as a repressor of light-regulated gene expression and development in Arabidopsis. DOI: 10.1105/tpc.004416 ; PMID: 12368493
- The age of the Arabidopsis thaliana genome duplication. DOI: 10.1023/a:1023001130337 ; PMID: 12777046
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Impact of unusual fatty acid synthesis on futile cycling through beta-oxidation and on gene expression in transgenic plants. DOI: 10.1104/pp.103.032938 ; PMID: 14671017
- Comprehensive comparison of auxin-regulated and brassinosteroid-regulated genes in Arabidopsis. DOI: 10.1104/pp.103.034736 ; PMID: 15047898
- Changes in the endoplasmic reticulum lipid properties in response to low temperature in Brassica napus. DOI: 10.1016/j.plaphy.2004.10.001 ; PMID: 15596101
- The Arabidopsis stearoyl-acyl carrier protein-desaturase family and the contribution of leaf isoforms to oleic acid synthesis. DOI: 10.1007/s11103-006-9086-y ; PMID: 17072561
- In silico identification and comparative genomics of candidate genes involved in biosynthesis and accumulation of seed oil in plants. DOI: 10.1155/2012/914843 ; PMID: 22312320
- Acyl-lipid metabolism. DOI: 10.1199/tab.0161 ; PMID: 23505340
- Characterization of substrate specificity of plant FatA and FatB acyl-ACP thioesterases. DOI: 10.1016/S0003-9861(02)00017-6 ; PMID: 12061798
Sequences:
cDNA Sequence
- >AT3G25110.1
AACAACAACACTAGCCAGGCTTTTTTTAACATTCGTCTTTGACAATTGTCCATCATCAATGGCATTAAATGGCAAAACCGTAATTTCGAACTCCACCAAGGGGCAAACTTAAAAGTCGATGTCTTTCTTCTTCACCTCGGACCCATCGGAGAGAAGATACTACTAGAAGAGATTCATTCACAGTGTTGAAATTAAAAAACCGAAACTTTCTCGTTTCTTCTTCTTCTTCTCCAATTTTCAAAATTCGAAAAGATGTTGAAGCTTTCGTGTAATGTGACTGATTCTAAGTTACAGAGAAGCTTACTCTTCTTCTCCCATTCATATCGATCTGATCCGGTGAATTTCATCCGTCGGAGAATTGTCTCTTGTTCTCAGACGAAGAAGACAGGTTTGGTTCCTTTGCGTGCTGTTGTATCTGCTGATCAAGGAAGTGTGGTTCAAGGTTTGGCTACTCTCGCGGATCAGCTCCGATTAGGTAGTTTGACTGAAGATGGTTTATCTTATAAAGAGAAGTTTGTTGTTAGATCTTACGAAGTGGGTAGTAACAAAACCGCTACTGTTGAAACCATTGCTAATCTTTTACAGGAGGTGGGATGTAATCATGCACAAAGTGTTGGTTTTTCGACTGATGGGTTTGCAACAACAACTACTATGAGGAAGTTGCATCTCATTTGGGTTACTGCGAGAATGCATATCGAGATCTATAAGTACCCTGCTTGGGGTGATGTGGTTGAGATAGAGACTTGGTGTCAGAGTGAAGGAAGGATTGGGACAAGGCGTGATTGGATTCTTAAGGATTCTGTCACTGGTGAAGTCACTGGCCGTGCTACAAGCAAGTGGGTGATGATGAACCAAGACACGAGACGGCTTCAGAAAGTTTCTGATGATGTTCGGGACGAGTACTTGGTCTTCTGTCCTCAAGAACCGAGGTTAGCATTTCCGGAAGAGAATAACAGAAGCTTGAAGAAAATCCCGAAACTCGAAGATCCGGCTCAGTATTCAATGATTGGGCTTAAGCCTAGACGAGCTGATCTCGACATGAACCAGCATGTCAATAATGTCACCTATATTGGATGGGTTCTCGAGAGCATACCACAAGAAATTGTAGACACGCACGAGCTTCAGGTCATAACTCTGGATTATAGAAGAGAATGTCAACAAGACGATGTGGTGGATTCACTCACCACCACCACCTCTGAAATTGGTGGAACCAATGGCTCTGCCACGTCTGGCACACAGGGCCACAACGATAGCCAGTTCTTGCACCTCCTGAGGTTGTCTGGAGATGGTCAGGAGATCAACCGCGGGACAACTCTGTGGAGAAAGAAGCCTTCAAGTTAAGAAATAGACAATGTCTTTAGCCATTTTGTTCTCAAGTTTCCATCATCTCAATGAAGATTTCGCTTCACGAGTCTGAGCAGGTCTCCATTTTTTTCTCTTTCAAGTTTGGGTTAGACTAGAGGGAACTGGATTGTTGGAGTATTAATCTTTGTTGAATTTCATTATGTTTGTTCATGTTTTTGTACAAATTTTGGGGATTTAGCCAAACCCATATCGTCTTTGGTCTTGTCTTGTGCCTGCGTGTATTTTTAATCTATCCGTTCAAAACACAGATTGTTCATTAGATGTTTTATATAAACAGAGTTAAAGACCTGAAGA
CDS Sequence
- >AT3G25110.1
ATGTTGAAGCTTTCGTGTAATGTGACTGATTCTAAGTTACAGAGAAGCTTACTCTTCTTCTCCCATTCATATCGATCTGATCCGGTGAATTTCATCCGTCGGAGAATTGTCTCTTGTTCTCAGACGAAGAAGACAGGTTTGGTTCCTTTGCGTGCTGTTGTATCTGCTGATCAAGGAAGTGTGGTTCAAGGTTTGGCTACTCTCGCGGATCAGCTCCGATTAGGTAGTTTGACTGAAGATGGTTTATCTTATAAAGAGAAGTTTGTTGTTAGATCTTACGAAGTGGGTAGTAACAAAACCGCTACTGTTGAAACCATTGCTAATCTTTTACAGGAGGTGGGATGTAATCATGCACAAAGTGTTGGTTTTTCGACTGATGGGTTTGCAACAACAACTACTATGAGGAAGTTGCATCTCATTTGGGTTACTGCGAGAATGCATATCGAGATCTATAAGTACCCTGCTTGGGGTGATGTGGTTGAGATAGAGACTTGGTGTCAGAGTGAAGGAAGGATTGGGACAAGGCGTGATTGGATTCTTAAGGATTCTGTCACTGGTGAAGTCACTGGCCGTGCTACAAGCAAGTGGGTGATGATGAACCAAGACACGAGACGGCTTCAGAAAGTTTCTGATGATGTTCGGGACGAGTACTTGGTCTTCTGTCCTCAAGAACCGAGGTTAGCATTTCCGGAAGAGAATAACAGAAGCTTGAAGAAAATCCCGAAACTCGAAGATCCGGCTCAGTATTCAATGATTGGGCTTAAGCCTAGACGAGCTGATCTCGACATGAACCAGCATGTCAATAATGTCACCTATATTGGATGGGTTCTCGAGAGCATACCACAAGAAATTGTAGACACGCACGAGCTTCAGGTCATAACTCTGGATTATAGAAGAGAATGTCAACAAGACGATGTGGTGGATTCACTCACCACCACCACCTCTGAAATTGGTGGAACCAATGGCTCTGCCACGTCTGGCACACAGGGCCACAACGATAGCCAGTTCTTGCACCTCCTGAGGTTGTCTGGAGATGGTCAGGAGATCAACCGCGGGACAACTCTGTGGAGAAAGAAGCCTTCAAGTTAA
Protein Sequence
- >AT3G25110.1
MLKLSCNVTDSKLQRSLLFFSHSYRSDPVNFIRRRIVSCSQTKKTGLVPLRAVVSADQGSVVQGLATLADQLRLGSLTEDGLSYKEKFVVRSYEVGSNKTATVETIANLLQEVGCNHAQSVGFSTDGFATTTTMRKLHLIWVTARMHIEIYKYPAWGDVVEIETWCQSEGRIGTRRDWILKDSVTGEVTGRATSKWVMMNQDTRRLQKVSDDVRDEYLVFCPQEPRLAFPEENNRSLKKIPKLEDPAQYSMIGLKPRRADLDMNQHVNNVTYIGWVLESIPQEIVDTHELQVITLDYRRECQQDDVVDSLTTTTSEIGGTNGSATSGTQGHNDSQFLHLLRLSGDGQEINRGTTLWRKKPSS