Gene Details:
- Gene ID: AT3G25070
- Gene Symbol: AtRIN4, RIN4
- Gene Name: RPM1 interacting protein 4
- Description: RPM1 interacting protein 4;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- Constitutive activation of a CC-NB-LRR protein alters morphogenesis through the cytokinin pathway in Arabidopsis. DOI: 10.1111/j.1365-313X.2008.03466.x ; PMID: 18315541
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- RIN4 functions with plasma membrane H+-ATPases to regulate stomatal apertures during pathogen attack. DOI: 10.1371/journal.pbio.1000139 ; PMID: 19564897
- A receptor-like cytoplasmic kinase phosphorylates the host target RIN4, leading to the activation of a plant innate immune receptor. DOI: 10.1016/j.chom.2011.01.010 ; PMID: 21320696
- Pseudomonas syringae Effector AvrPphB Suppresses AvrB-Induced Activation of RPM1 but Not AvrRpm1-Induced Activation. DOI: 10.1094/MPMI-08-14-0248-R ; PMID: 25625821
- Re-analysis of RNA-seq transcriptome data reveals new aspects of gene activity in Arabidopsis root hairs. DOI: 10.3389/fpls.2015.00421 ; PMID: 26106402
- An Arabidopsis Plasma Membrane Proton ATPase Modulates JA Signaling and Is Exploited by the Pseudomonas syringae Effector Protein AvrB for Stomatal Invasion. DOI: 10.1105/tpc.15.00466 ; PMID: 26198069
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Bacterial AvrRpt2-Like Cysteine Proteases Block Activation of the Arabidopsis Mitogen-Activated Protein Kinases, MPK4 and MPK11. DOI: 10.1104/pp.16.00336 ; PMID: 27208280
- Teaching an old dog new tricks: Suppressing activation of specific mitogen-activated kinases as a potential virulence function of the bacterial AvrRpt2 effector protein. DOI: 10.1080/15592324.2016.1257456 ; PMID: 27830985
- RIN4 recruits the exocyst subunit EXO70B1 to the plasma membrane. DOI: 10.1093/jxb/erx007 ; PMID: 28338727
- The Bacterial Effector AvrB-Induced RIN4 Hyperphosphorylation Is Mediated by a Receptor-Like Cytoplasmic Kinase Complex in Arabidopsis. DOI: 10.1094/MPMI-01-17-0017-R ; PMID: 28353399
- Inositol-requiring enzyme 1 (IRE1) plays for AvrRpt2-triggered immunity and RIN4 cleavage in Arabidopsis under endoplasmic reticulum (ER) stress. DOI: 10.1016/j.plaphy.2020.09.002 ; PMID: 32927152
- The receptor-like cytoplasmic kinase CDG1 negatively regulates Arabidopsis pattern-triggered immunity and is involved in AvrRpm1-induced RIN4 phosphorylation. DOI: 10.1093/plcell/koab033 ; PMID: 33619522
- MYC2 influences salicylic acid biosynthesis and defense against bacterial pathogens in Arabidopsis thaliana. DOI: 10.1111/ppl.13575 ; PMID: 34596247
- Arabidopsis Plasma Membrane ATPase AHA5 Is Negatively Involved in PAMP-Triggered Immunity. DOI: 10.3390/ijms23073857 ; PMID: 35409217
- Large-scale analysis of in vivo phosphorylated membrane proteins by immobilized metal ion affinity chromatography and mass spectrometry. DOI: 10.1074/mcp.T300006-MCP200 ; PMID: 14506206
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
Sequences:
cDNA Sequence
- >AT3G25070.2
AAACAATGTAACATGGACACCAAAATAAAGCCGCCTTTAACGGTGACGGTAACGGTAACGGCGTTTGAGTGCTCTTGACAATACATGAAAATTTAGTAATAGAGTTAAGAAATGAAATTAATAGAGTTTGGAGTGAGACAAAGAGAGAAGAGAAGATTAGAGAGAGGAGAGGAAGGGTCAAAGAATACATAGCATCACCACTAGTCAACGCTTTTATAAAACTTCTTCTTCGTCTCCTCTCCTTCTCACATCTCTCTCTGTCTTTCTCTCTCAAACCTAACAAAAGCTTCAGACTTCAATTCTTTAGCTACCTCTCTCCCATGGCAGTAAGTGTTTTCTTTCCTTCTTTCCTTCTCCTCTTCTTCTTATTTAGGTCTAGAGCTTTCTCTCAGATTATAGTTTTTGTTTCGATTCCGTCAATCTCTGACCCTTTTTTTGGAGGATTTGTAGAAAGTTGAGTCTTAATCTATTTGCATTTATGGTTCTTCCTATTGAGATAACATTTCTATGGATTGCGATGTCTATTAGTATTCAACTTTATGATTCTGATTTGCTTTAGATAAGAAAAGGGTTTTATGAAAGTTACTATTTTTATGGTAAAGTTTCTATTTTTGCTTAGCAAAGATTTCAACTTTATCATTGTACTTGGTCGAAATCGATAAACCCAATTTGTATTTGTTCTGTTTTGGATTCTTAAGTGAATTTGCTATCTTGTTTCTGTGATGATTGTTCTTTAGGATGTTATGTTATTGAATGTTTTGTGGAAGGACATTGTTGTTGAATTGTTTGTTGCAACAGCGTTCGAATGTACCAAAATTTGGAAACTGGGAAGCTGAGGAGAATGTTCCTTACACAGCTTACTTTGACAAAGCTCGTAAGACTCGAGCACCCGGTAGCAAGATCATGAACCCGAATGACCCGGAGTATAACTCTGACTCTCAATCACAAGCTCCTCCTCATCCTCCTTCTTCCAGAACCAAACCTGAGCAAGTTGACACGGTTAGAAGATCACGTGAGCATATGAGAAGCCGAGAAGAGAGCGAGTTGAAACAGTTTGGTGATGCTGGTGGTTCATCAAATGAAGCTGCTAACAAAAGACAAGGAAGAGCTTCTCAGAACAATAGTTATGACAACAAGTCACCTTTGCATAAGAATTCTTATGATGGTACTGGAAAATCTAGGCCTAAACCTACCAACCTTAGAGCTGATGAAAGTCCTGAAAAAGTCACAGTGGTGCCTAAATTCGGTGACTGGGACGAGAACAACCCGTCATCAGCTGACGGATACACGCATATCTTCAATAAAGTCCGTGAAGAGAGAAGTTCTGGAGCAAATGTGAGTGGATCTTCAAGAACGCCGACTCATCAAAGCTCCCGTAACCCGAACAACACTTCCTCATGTTGCTGCTTTGGCTTTGGAGGAAAATGAAAGGGACCGGAAGATTGTATATAGTTATCGAGAAATCAGTGTGTAATCTTGATGATTAGACATTCGTGCTTCTTTAGATGAAATAAGGCATAAGTCTCACTTGCATAAGATTTTTATAGTATAATTTTTGTATGTATATTTTGCAATTCTTCCTTAATACTTTTGGTGTTTTCATAAGACACATTCCAGTTTCGGATCTGCTTGCAGATGCATTATATCTTGCTTGGTACGGCCTGAGTGATTTGGTAACTGATTTGATATGAATCAGAGATATTTGGGTACCTCCAAGTTTGTTGTTTCTAATGTTCAAAGCCTTAACTCTGCACCACTATAAAGAAAGA - >AT3G25070.1
AAACAATGTAACATGGACACCAAAATAAAGCCGCCTTTAACGGTGACGGTAACGGTAACGGCGTTTGAGTGCTCTTGACAATACATGAAAATTTAGTAATAGAGTTAAGAAATGAAATTAATAGAGTTTGGAGTGAGACAAAGAGAGAAGAGAAGATTAGAGAGAGGAGAGGAAGGGTCAAAGAATACATAGCATCACCACTAGTCAACGCTTTTATAAAACTTCTTCTTCGTCTCCTCTCCTTCTCACATCTCTCTCTGTCTTTCTCTCTCAAACCTAACAAAAGCTTCAGACTTCAATTCTTTAGCTACCTCTCTCCCATGGCAGTAAGTGTTTTCTTTCCTTCTTTCCTTCTCCTCTTCTTCTTATTTAGGTCTAGAGCTTTCTCTCAGATTATAGTTTTTGTTTCGATTCCGTCAATCTCTGACCCTTTTTTTGGAGGATTTGTAGAAAGTTGAGTCTTAATCTATTTGCATTTATGGTTCTTCCTATTGAGATAACATTTCTATGGATTGCGATGTCTATTAGTATTCAACTTTATGATTCTGATTTGCTTTAGATAAGAAAAGGGTTTTATGAAAGTTACTATTTTTATGGTAAAGTTTCTATTTTTGCTTAGCAAAGATTTCAACTTTATCATTGTACTTGGTCGAAATCGATAAACCCAATTTGTATTTGTTCTGTTTTGGATTCTTAAGTGAATTTGCTATCTTGTTTCTGTGATGATTGTTCTTTAGGATGTTATGTTATTGAATGTTTTGTGGAAGGACATTGTTGTTGAATTGTTTGTTGCAACAGCGTTCGAATGTACCAAAATTTGGAAACTGGGAAGCTGAGGAGAATGTTCCTTACACAGCTTACTTTGACAAAGCTCGTAAGACTCGAGCACCCGGTAGCAAGATCATGAACCCGAATGACCCGGAGTATAACTCTGACTCTCAATCACAAGCTCCTCCTCATCCTCCTTCTTCCAGAACCAAACCTGAGCAAGTTGACACGGTTAGAAGATCACGTGAGCATATGAGAAGCCGAGAAGAGAGCGAGTTGAAACAGTTTGGTGATGCTGGTGGTTCATCAAATGAAGCTGCTAACAAAAGACAAGGAAGAGCTTCTCAGAACAATAGTTATGACAACAAGTCACCTTTGCATAAGAATTCTTATGATGGTACTGGAAAATCTAGGCCTAAACCTACCAACCTTAGAGCTGATGAAAGTCCTGAAAAAGTCACAGTGGTGCCTAAATTCGGTGACTGGGACGAGAACAACCCGTCATCAGCTGACGGATACACGCATATCTTCAATAAAGTCCGTGAAGAGAGAAGTTCTGGAGCAAATGTGAGTGGATCTTCAAGAACGCCGACTCATCAAAGCTCCCGTAACCCGAACAACACTTCCTCATGTTGCTGCTTTGGCTTTGGAGGAAAATGAAAGGGACCGGAAGATTGTATATAGTTATCGAGAAATCAGTGTGTAATCTTGATGATTAGACATTCGTGCTTCTTTAGATGAAATAAGGCATAAGTCTCACTTGCATAAGATTTTTATAGTATAATTTTTGTATGTATATTTTGCAATTCTTCCTTAATACTTTTGGTGTTTTCATAAGACACATTCCAGTTTCGGATCTGCTTGCAGATGCATTATATCTTGCTTGGTACGGCCTGAGTGATTTGGTAACTGATTTGATATGAATCAGAGATATTTGGGTACCTCCAAGTTTGTTGTTTCTAATGTTCAAAGCCTTAACTCTGCACCACTATAAAGAAAGA
CDS Sequence
- >AT3G25070.2
ATGTTTTGTGGAAGGACATTGTTGTTGAATTGTTTGTTGCAACAGCGTTCGAATGTACCAAAATTTGGAAACTGGGAAGCTGAGGAGAATGTTCCTTACACAGCTTACTTTGACAAAGCTCGTAAGACTCGAGCACCCGGTAGCAAGATCATGAACCCGAATGACCCGGAGTATAACTCTGACTCTCAATCACAAGCTCCTCCTCATCCTCCTTCTTCCAGAACCAAACCTGAGCAAGTTGACACGGTTAGAAGATCACGTGAGCATATGAGAAGCCGAGAAGAGAGCGAGTTGAAACAGTTTGGTGATGCTGGTGGTTCATCAAATGAAGCTGCTAACAAAAGACAAGGAAGAGCTTCTCAGAACAATAGTTATGACAACAAGTCACCTTTGCATAAGAATTCTTATGATGGTACTGGAAAATCTAGGCCTAAACCTACCAACCTTAGAGCTGATGAAAGTCCTGAAAAAGTCACAGTGGTGCCTAAATTCGGTGACTGGGACGAGAACAACCCGTCATCAGCTGACGGATACACGCATATCTTCAATAAAGTCCGTGAAGAGAGAAGTTCTGGAGCAAATGTGAGTGGATCTTCAAGAACGCCGACTCATCAAAGCTCCCGTAACCCGAACAACACTTCCTCATGTTGCTGCTTTGGCTTTGGAGGAAAATGA - >AT3G25070.1
ATGTTTTGTGGAAGGACATTGTTGTTGAATTGTTTGTTGCAACAGCGTTCGAATGTACCAAAATTTGGAAACTGGGAAGCTGAGGAGAATGTTCCTTACACAGCTTACTTTGACAAAGCTCGTAAGACTCGAGCACCCGGTAGCAAGATCATGAACCCGAATGACCCGGAGTATAACTCTGACTCTCAATCACAAGCTCCTCCTCATCCTCCTTCTTCCAGAACCAAACCTGAGCAAGTTGACACGGTTAGAAGATCACGTGAGCATATGAGAAGCCGAGAAGAGAGCGAGTTGAAACAGTTTGGTGATGCTGGTGGTTCATCAAATGAAGCTGCTAACAAAAGACAAGGAAGAGCTTCTCAGAACAATAGTTATGACAACAAGTCACCTTTGCATAAGAATTCTTATGATGGTACTGGAAAATCTAGGCCTAAACCTACCAACCTTAGAGCTGATGAAAGTCCTGAAAAAGTCACAGTGGTGCCTAAATTCGGTGACTGGGACGAGAACAACCCGTCATCAGCTGACGGATACACGCATATCTTCAATAAAGTCCGTGAAGAGAGAAGTTCTGGAGCAAATGTGAGTGGATCTTCAAGAACGCCGACTCATCAAAGCTCCCGTAACCCGAACAACACTTCCTCATGTTGCTGCTTTGGCTTTGGAGGAAAATGA
Protein Sequence
- >AT3G25070.2
MFCGRTLLLNCLLQQRSNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPEYNSDSQSQAPPHPPSSRTKPEQVDTVRRSREHMRSREESELKQFGDAGGSSNEAANKRQGRASQNNSYDNKSPLHKNSYDGTGKSRPKPTNLRADESPEKVTVVPKFGDWDENNPSSADGYTHIFNKVREERSSGANVSGSSRTPTHQSSRNPNNTSSCCCFGFGGK - >AT3G25070.1
MFCGRTLLLNCLLQQRSNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPEYNSDSQSQAPPHPPSSRTKPEQVDTVRRSREHMRSREESELKQFGDAGGSSNEAANKRQGRASQNNSYDNKSPLHKNSYDGTGKSRPKPTNLRADESPEKVTVVPKFGDWDENNPSSADGYTHIFNKVREERSSGANVSGSSRTPTHQSSRNPNNTSSCCCFGFGGK