Gene Details:
- Gene ID: AT3G24810
- Gene Symbol: ICK3, KRP5
- Gene Name: kip-related protein 5
- Description: Cyclin-dependent kinase inhibitor family protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000017 — vascular leaf primordium — leaf primordium (exact), portion of vascular leaf primordium tissue (exact), primordio de hoja (Spanish, exact), vascular leaf primordia (exact, plural), 葉原基 (Japanese, exact)
- PO:0000225 — peripheral zone — zona periférica (Spanish, exact), 周辺帯 (Japanese, exact), peripheral meristem (related)
- PO:0025276 — shoot procambium — procambio del epiblasto (Spanish, exact), シュート前形成層 (Japanese, exact)
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
Function-related keywords:
- vascular leaf primordium , peripheral zone , shoot procambium , shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure
Literature:
- Genome-wide analysis of core cell cycle genes in Arabidopsis. DOI: 10.1105/tpc.010445 ; PMID: 11971144
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- A CDC45 homolog in Arabidopsis is essential for meiosis, as shown by RNA interference-induced gene silencing. DOI: 10.1105/tpc.016865 ; PMID: 14660803
- Gene family analysis of the Arabidopsis pollen transcriptome reveals biological implications for cell growth, division control, and gene expression regulation. DOI: 10.1104/pp.104.057935 ; PMID: 15908605
- Arabidopsis KRPs have distinct inhibitory activity toward cyclin D2-associated kinases, including plant-specific B-type cyclin-dependent kinase. DOI: 10.1016/j.febslet.2005.12.018 ; PMID: 16376885
- A membrane-bound NAC transcription factor regulates cell division in Arabidopsis. DOI: 10.1105/tpc.106.043018 ; PMID: 17098812
- Arabidopsis cyclin-dependent kinase inhibitors are nuclear-localized and show different localization patterns within the nucleoplasm. DOI: 10.1007/s00299-006-0294-3 ; PMID: 17253089
- Targeted degradation of the cyclin-dependent kinase inhibitor ICK4/KRP6 by RING-type E3 ligases is essential for mitotic cell cycle progression during Arabidopsis gametogenesis. DOI: 10.1105/tpc.108.059741 ; PMID: 18552199
- Targeted interactomics reveals a complex core cell cycle machinery in Arabidopsis thaliana. DOI: 10.1038/msb.2010.53 ; PMID: 20706207
- Ectopic expression of Kip-related proteins restrains root-knot nematode-feeding site expansion. DOI: 10.1111/nph.12255 ; PMID: 23574394
- AtPRMT5 Regulates Shoot Regeneration through Mediating Histone H4R3 Dimethylation on KRPs and Pre-mRNA Splicing of RKP in Arabidopsis. DOI: 10.1016/j.molp.2016.10.010 ; PMID: 27780782
- Exploiting cell cycle inhibitor genes of the KRP family to control root-knot nematode induced feeding sites in plants. DOI: 10.1111/pce.12912 ; PMID: 28103637
- Rice and Arabidopsis homologs of yeast CHROMOSOME TRANSMISSION FIDELITY PROTEIN 4 commonly interact with Polycomb complexes but exert divergent regulatory functions. DOI: 10.1093/plcell/koab047 ; PMID: 33647940
- Functional analysis of cyclin-dependent kinase inhibitors of Arabidopsis. DOI: 10.1105/tpc.010087 ; PMID: 11449057
- Analysis of the spatial expression pattern of seven Kip related proteins (KRPs) in the shoot apex of Arabidopsis thaliana. DOI: 10.1093/aob/mch077 ; PMID: 15037450
- Global analysis of the core cell cycle regulators of Arabidopsis identifies novel genes, reveals multiple and highly specific profiles of expression and provides a coherent model for plant cell cycle control. DOI: 10.1111/j.1365-313X.2004.02319.x ; PMID: 15686519
- Arabidopsis KRPs have distinct inhibitory activity toward cyclin D2-associated kinases, including plant-specific B-type cyclin-dependent kinase. DOI: 10.1016/j.febslet.2005.12.018 ; PMID: 16376885
- Arabidopsis cyclin-dependent kinase inhibitors are nuclear-localized and show different localization patterns within the nucleoplasm. DOI: 10.1007/s00299-006-0294-3 ; PMID: 17253089
Sequences:
cDNA Sequence
- >AT3G24810.1
GTCTAATTTGTTTTTTGATTCGATTTTAAAATAAATATTTCCATTGTCCTTTTAGTTTTCACTTTTTCAGATTAAAAATCACTTTTTTCCTCCTCCTTCGTTGCTTCCCTCCTTTCGCTCTCGACCGGAGATTCAGTAAACCACCTTCCCGGAGATGGGAAAATACATTAAGAAGTCAAAAGTCGCCGGTGCCGTTTCCGTTAAGGATAAATCTCACCCACCCGCTCTAGGTTTCCGTACCAGAGCCGCCGCCGCTAAAAACCTCGCCCTCCACCGTCTCCGTTCTCATTCCGACGAAGCAGACTCCTTTAACTACCTCCAGCTCCGGAGCCGCCGTCTCGTGAAGCTTCCATTACTCACTAATACCAGAAAACAGCAGAAGCAACAGCTCATTCCTAGTGTCAATCAATGTCAAACGAAAAACCCTAGGGCTAGTTCCGGTCCGGCGAAGAAATTAGAGCCGGATACGACGACGGAAGAAGCTTGTGGTGATAATGAGAGAATATCTAGGTCTGATTGTAATTTTGGAGATAAAGGTTTTGATTTGGAATCAGAAAACAGGAGCATGATAAGTGATTCAAAATCAATACAAAGTGAGATTGAAGACTTCTTTGCTAGCGCAGAACAGCAACAACAGAGATTCTTCATTCAAAAGTACAACTTTGACATTGTCTCGGACAATCCATTGCCTGGACGTTACGAATGGGTCAAAGTGATGCCATGAAATGAGTTGTGTTCGATGTAAAGTTGTGTGCTTTAGGAAACATCTGTGTTGGAACAGAGGAGATGAAAATTGCACACAGACTAACTTTGTGGGGTTTTAGGGTTGGTGTATAACTTGTTAGTCAAGAATAATGTAATGTTAATCTCTCTCATTTGCTACAAATAAATGTCTAATTTAACTGTCAAGTTACTTAAATTAGTATTGTAAATCTCTTCATTGTTCTTTGGTTACTTCAGTGAAGGTCTGAGTTTTGTGGTTCTG
CDS Sequence
- >AT3G24810.1
ATGGGAAAATACATTAAGAAGTCAAAAGTCGCCGGTGCCGTTTCCGTTAAGGATAAATCTCACCCACCCGCTCTAGGTTTCCGTACCAGAGCCGCCGCCGCTAAAAACCTCGCCCTCCACCGTCTCCGTTCTCATTCCGACGAAGCAGACTCCTTTAACTACCTCCAGCTCCGGAGCCGCCGTCTCGTGAAGCTTCCATTACTCACTAATACCAGAAAACAGCAGAAGCAACAGCTCATTCCTAGTGTCAATCAATGTCAAACGAAAAACCCTAGGGCTAGTTCCGGTCCGGCGAAGAAATTAGAGCCGGATACGACGACGGAAGAAGCTTGTGGTGATAATGAGAGAATATCTAGGTCTGATTGTAATTTTGGAGATAAAGGTTTTGATTTGGAATCAGAAAACAGGAGCATGATAAGTGATTCAAAATCAATACAAAGTGAGATTGAAGACTTCTTTGCTAGCGCAGAACAGCAACAACAGAGATTCTTCATTCAAAAGTACAACTTTGACATTGTCTCGGACAATCCATTGCCTGGACGTTACGAATGGGTCAAAGTGATGCCATGA
Protein Sequence
- >AT3G24810.1
MGKYIKKSKVAGAVSVKDKSHPPALGFRTRAAAAKNLALHRLRSHSDEADSFNYLQLRSRRLVKLPLLTNTRKQQKQQLIPSVNQCQTKNPRASSGPAKKLEPDTTTEEACGDNERISRSDCNFGDKGFDLESENRSMISDSKSIQSEIEDFFASAEQQQQRFFIQKYNFDIVSDNPLPGRYEWVKVMP