Gene Details:
- Gene ID: AT3G24550
- Gene Symbol: ATPERK1, PERK1
- Gene Name: proline-rich extensin-like receptor kinase 1, proline-rich extensin-like receptor kinase 1
- Description: proline extensin-like receptor kinase 1;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , pollen tube cell
Literature:
- The predicted candidates of Arabidopsis plastid inner envelope membrane proteins and their expression profiles. DOI: 10.1104/pp.008052 ; PMID: 12376647
- The proline-rich, extensin-like receptor kinase-1 (PERK1) gene is rapidly induced by wounding. DOI: 10.1023/a:1019951120788 ; PMID: 12374299
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Process for the integrated extraction, identification and quantification of metabolites, proteins and RNA to reveal their co-regulation in biochemical networks. DOI: 10.1002/pmic.200200500 ; PMID: 14730673
- A comprehensive expression analysis of the Arabidopsis proline-rich extensin-like receptor kinase gene family using bioinformatic and experimental approaches. DOI: 10.1093/pcp/pch206 ; PMID: 15653807
- The Arabidopsis cold-responsive transcriptome and its regulation by ICE1. DOI: 10.1105/tpc.105.035568 ; PMID: 16214899
- Mapping the Arabidopsis organelle proteome. DOI: 10.1073/pnas.0506958103 ; PMID: 16618929
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Autophosphorylation profiling of Arabidopsis protein kinases using the cell-free system. DOI: 10.1016/j.phytochem.2011.02.029 ; PMID: 21477822
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Mapping the Arabidopsis organelle proteome. DOI: 10.1073/pnas.0506958103 ; PMID: 16618929
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
- A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. DOI: 10.1074/mcp.M700099-MCP200 ; PMID: 17644812
- MASCP Gator: an aggregation portal for the visualization of Arabidopsis proteomics data. DOI: 10.1104/pp.110.168195 ; PMID: 21075962
Sequences:
cDNA Sequence
- >AT3G24550.1
AAAACATCTATTAACTTCTTAAATATTTTTTCTCAAATTTGTAGTCCAAAAAAAACACGACGCGTATGTTTTTTTTGTTGTTGTTGTGTAATAAGAAGAGAAAGAACGTAAAAGAATTGACGCGGACGAATCGTGTTAGACCCAAAAAGAACAGCTTTCAATTCCATTGTCCAAATTCCTTATCAAAAAAAAACTCTACTCTCGGTGGCACCAGATCACTCCTCCTCTCTCTTCTCCTACCTTTTTCACATTCTCTTCTTCTTCTTCTCGTGAGAAAAAGAAAGAGAGATTCTTTATTCATTAGATCGAAGCAAAAATGTCCACAGCGCCGTCTCCAGGCACTACTCCATCACCATCTCCACCGTCTCCTCCCACAAACTCGACAACCACCACTCCTCCTCCAGCAGCCTCTTCTCCTCCTCCCACCACAACTCCTTCTTCTCCTCCTCCGTCGCCGTCAACTAATTCAACCTCTCCTCCTCCTTCTTCTCCTTTACCTCCTTCTCTTCCTCCTCCATCTCCTCCTGGATCTTTAACTCCTCCTCTTCCTCAACCTTCCCCCTCCGCTCCCATCACTCCTTCTCCACCGTCTCCCACCACACCCTCAAACCCTCGAAGCCCTCCATCTCCTAACCAAGGACCACCAAACACTCCCTCAGGATCTACTCCTAGAACTCCATCAAACACTAAACCGTCGCCGCCGTCTGATTCTTCCGATGGATTGTCTACCGGAGTTGTGGTAGGAATCGCCATTGGAGGAGTCGCTATTCTTGTTATACTGACTCTGATTTGTCTTCTCTGTAAGAAGAAACGAAGAAGAAGACACGACGATGAAGCTGCTTACTATGTTCCTCCTCCTCCTCCATCTGGTCCCAAAGCTGGAGGACCTTACGGTGGTCAACAACAGTATTGGCAACAACAAAACGCGTCACGGCCGTCAGATAATCATGTAGTGACGTCATTGCCACCACCTAAGCCTCCATCTCCACCACGAAAACCTCCTCCGCCACCTCCACCACCAGCATTCATGAGTAGCAGTGGTGGTTCTGACTATTCGGATCTTCCGGTTCTTCCTCCACCATCTCCAGGGCTTGTGTTAGGCTTTTCTAAAAGCACTTTCACTTATGAGGAGTTGTCGAGAGCTACTAATGGCTTCTCTGAGGCTAATTTGTTAGGACAAGGAGGGTTTGGTTATGTGCATAAAGGTATATTGCCTAGTGGGAAAGAAGTTGCTGTGAAACAGTTGAAAGCTGGTAGTGGTCAGGGAGAGAGAGAGTTTCAGGCTGAGGTTGAGATCATTAGCAGAGTTCATCACAGGCATTTGGTTTCTCTTATTGGTTATTGTATGGCCGGTGTTCAAAGATTACTTGTCTATGAGTTTGTTCCAAACAACAATCTTGAGTTTCACCTCCATGGTAAGGGACGGCCTACGATGGAATGGAGTACTAGATTGAAGATTGCTCTTGGATCTGCTAAAGGACTTTCATATCTTCATGAAGATTGCAATCCGAAAATCATTCACCGTGATATTAAGGCGTCAAACATATTGATTGATTTCAAATTTGAAGCTAAGGTTGCTGACTTTGGTCTTGCCAAGATTGCTTCTGATACAAACACTCATGTATCTACACGCGTGATGGGAACCTTTGGGTATTTGGCTCCGGAATATGCTGCAAGTGGAAAGCTCACAGAAAAGTCTGACGTTTTCTCATTTGGCGTTGTACTTTTGGAACTTATTACTGGGAGGCGCCCTGTTGATGCGAACAATGTCTATGTAGATGACAGCTTAGTTGACTGGGCACGACCATTGCTTAACCGAGCATCTGAGGAAGGAGATTTTGAGGGTTTGGCTGATTCAAAGATGGGTAATGAGTATGACAGAGAGGAGATGGCTCGCATGGTTGCTTGCGCTGCGGCTTGTGTTCGCCATTCAGCTCGCCGCAGACCTCGCATGAGCCAGATAGTACGGGCGTTAGAAGGAAATGTATCGCTGTCTGATCTTAACGAAGGGATGAGACCGGGTCACAGCAACGTATACAGCTCATATGGAGGAAGCACAGACTATGACACGAGCCAATACAACGACGACATGATAAAGTTTAGGAAAATGGCTCTTGGAACTCAAGAATACGGCACAACCGGCGAGTACAGTAATCCAACCAGTGACTACGGACTGTACCCGTCTGGTTCAAGCAGTGAAGGTCAAGCCACACGAGAAATGGAGATGGGAAAGATTAAGAAAACCGGTCAAGGTTATAGTGGACCCTCTCTTTAAACCATAAGAGTGGAGAAATTGCAGGTTTTTTTTGGATTCTTTTTCTTATTAACTGTAAAGATTTGAGGAAATTGCCTTACTCTCTAATTGATTTACTACGATATATGATACGTTTAAAATTGTTTTGCTTTGGTTTCTTCTTTAGATGTTGTGATGTTGATTGATTCTGGTTTGAATATTATTCTTTCATTCTTTTTTCTATTTTTCTTCTGAAGAATTTGTTTGTTATGTCTTTTGAGCTTTTGGCCTAGTTTGGTTAAGTTCC
CDS Sequence
- >AT3G24550.1
ATGTCCACAGCGCCGTCTCCAGGCACTACTCCATCACCATCTCCACCGTCTCCTCCCACAAACTCGACAACCACCACTCCTCCTCCAGCAGCCTCTTCTCCTCCTCCCACCACAACTCCTTCTTCTCCTCCTCCGTCGCCGTCAACTAATTCAACCTCTCCTCCTCCTTCTTCTCCTTTACCTCCTTCTCTTCCTCCTCCATCTCCTCCTGGATCTTTAACTCCTCCTCTTCCTCAACCTTCCCCCTCCGCTCCCATCACTCCTTCTCCACCGTCTCCCACCACACCCTCAAACCCTCGAAGCCCTCCATCTCCTAACCAAGGACCACCAAACACTCCCTCAGGATCTACTCCTAGAACTCCATCAAACACTAAACCGTCGCCGCCGTCTGATTCTTCCGATGGATTGTCTACCGGAGTTGTGGTAGGAATCGCCATTGGAGGAGTCGCTATTCTTGTTATACTGACTCTGATTTGTCTTCTCTGTAAGAAGAAACGAAGAAGAAGACACGACGATGAAGCTGCTTACTATGTTCCTCCTCCTCCTCCATCTGGTCCCAAAGCTGGAGGACCTTACGGTGGTCAACAACAGTATTGGCAACAACAAAACGCGTCACGGCCGTCAGATAATCATGTAGTGACGTCATTGCCACCACCTAAGCCTCCATCTCCACCACGAAAACCTCCTCCGCCACCTCCACCACCAGCATTCATGAGTAGCAGTGGTGGTTCTGACTATTCGGATCTTCCGGTTCTTCCTCCACCATCTCCAGGGCTTGTGTTAGGCTTTTCTAAAAGCACTTTCACTTATGAGGAGTTGTCGAGAGCTACTAATGGCTTCTCTGAGGCTAATTTGTTAGGACAAGGAGGGTTTGGTTATGTGCATAAAGGTATATTGCCTAGTGGGAAAGAAGTTGCTGTGAAACAGTTGAAAGCTGGTAGTGGTCAGGGAGAGAGAGAGTTTCAGGCTGAGGTTGAGATCATTAGCAGAGTTCATCACAGGCATTTGGTTTCTCTTATTGGTTATTGTATGGCCGGTGTTCAAAGATTACTTGTCTATGAGTTTGTTCCAAACAACAATCTTGAGTTTCACCTCCATGGTAAGGGACGGCCTACGATGGAATGGAGTACTAGATTGAAGATTGCTCTTGGATCTGCTAAAGGACTTTCATATCTTCATGAAGATTGCAATCCGAAAATCATTCACCGTGATATTAAGGCGTCAAACATATTGATTGATTTCAAATTTGAAGCTAAGGTTGCTGACTTTGGTCTTGCCAAGATTGCTTCTGATACAAACACTCATGTATCTACACGCGTGATGGGAACCTTTGGGTATTTGGCTCCGGAATATGCTGCAAGTGGAAAGCTCACAGAAAAGTCTGACGTTTTCTCATTTGGCGTTGTACTTTTGGAACTTATTACTGGGAGGCGCCCTGTTGATGCGAACAATGTCTATGTAGATGACAGCTTAGTTGACTGGGCACGACCATTGCTTAACCGAGCATCTGAGGAAGGAGATTTTGAGGGTTTGGCTGATTCAAAGATGGGTAATGAGTATGACAGAGAGGAGATGGCTCGCATGGTTGCTTGCGCTGCGGCTTGTGTTCGCCATTCAGCTCGCCGCAGACCTCGCATGAGCCAGATAGTACGGGCGTTAGAAGGAAATGTATCGCTGTCTGATCTTAACGAAGGGATGAGACCGGGTCACAGCAACGTATACAGCTCATATGGAGGAAGCACAGACTATGACACGAGCCAATACAACGACGACATGATAAAGTTTAGGAAAATGGCTCTTGGAACTCAAGAATACGGCACAACCGGCGAGTACAGTAATCCAACCAGTGACTACGGACTGTACCCGTCTGGTTCAAGCAGTGAAGGTCAAGCCACACGAGAAATGGAGATGGGAAAGATTAAGAAAACCGGTCAAGGTTATAGTGGACCCTCTCTTTAA
Protein Sequence
- >AT3G24550.1
MSTAPSPGTTPSPSPPSPPTNSTTTTPPPAASSPPPTTTPSSPPPSPSTNSTSPPPSSPLPPSLPPPSPPGSLTPPLPQPSPSAPITPSPPSPTTPSNPRSPPSPNQGPPNTPSGSTPRTPSNTKPSPPSDSSDGLSTGVVVGIAIGGVAILVILTLICLLCKKKRRRRHDDEAAYYVPPPPPSGPKAGGPYGGQQQYWQQQNASRPSDNHVVTSLPPPKPPSPPRKPPPPPPPPAFMSSSGGSDYSDLPVLPPPSPGLVLGFSKSTFTYEELSRATNGFSEANLLGQGGFGYVHKGILPSGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHRHLVSLIGYCMAGVQRLLVYEFVPNNNLEFHLHGKGRPTMEWSTRLKIALGSAKGLSYLHEDCNPKIIHRDIKASNILIDFKFEAKVADFGLAKIASDTNTHVSTRVMGTFGYLAPEYAASGKLTEKSDVFSFGVVLLELITGRRPVDANNVYVDDSLVDWARPLLNRASEEGDFEGLADSKMGNEYDREEMARMVACAAACVRHSARRRPRMSQIVRALEGNVSLSDLNEGMRPGHSNVYSSYGGSTDYDTSQYNDDMIKFRKMALGTQEYGTTGEYSNPTSDYGLYPSGSSSEGQATREMEMGKIKKTGQGYSGPSL