Information report for AT3G24520
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- When defense pathways collide. The response of Arabidopsis to a combination of drought and heat stress. DOI: 10.1104/pp.103.033431 ; PMID: 15047901
- Genomic analysis of the nitrate response using a nitrate reductase-null mutant of Arabidopsis. DOI: 10.1104/pp.104.044610 ; PMID: 15333754
- The Arabidopsis cold-responsive transcriptome and its regulation by ICE1. DOI: 10.1105/tpc.105.035568 ; PMID: 16214899
- PIP5K9, an Arabidopsis phosphatidylinositol monophosphate kinase, interacts with a cytosolic invertase to negatively regulate sugar-mediated root growth. DOI: 10.1105/tpc.106.045658 ; PMID: 17220200
- Arabidopsis ESK1 encodes a novel regulator of freezing tolerance. DOI: 10.1111/j.1365-313X.2006.02994.x ; PMID: 17316173
- Putative cold acclimation pathways in Arabidopsis thaliana identified by a combined analysis of mRNA co-expression patterns, promoter motifs and transcription factors. DOI: 10.1186/1471-2164-8-304 ; PMID: 17764576
- The protein phosphatase RCF2 and its interacting partner NAC019 are critical for heat stress-responsive gene regulation and thermotolerance in Arabidopsis. DOI: 10.1105/tpc.113.118927 ; PMID: 24415771
- Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. DOI: 10.1186/1471-2229-13-229 ; PMID: 24377444
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
Gene Resources
- UniProt: A0A654FC90
- EMBL: CACRSJ010000106
- AlphaFoldDB: A0A654FC90
- EnsemblPlants: AT3G24520.1
- Gramene: AT3G24520.1
- KEGG: ath:AT3G24520
- Orthologous matrix: KHARGMY
- ExpressionAtlas: AT3G24520
- InterPro: IPR000232, IPR036388, IPR036390
- PANTHER: PTHR10015, PTHR10015:SF332
- SUPFAM: SSF46785
- PROSITE: PS00434
- Gene3D: 1.10.10.10
- SWISS-MODEL: A0A654FC90
Homologs
- Brassica napus GSBRNA2T00068086001, GSBRNA2T00128264001, GSBRNA2T00154915001, GSBRNA2T00097134001
- Brassica oleracea XP_013593227.1, XP_013630575.1, XP_013630574.1
- Brassica rapa XP_009102502.1, XP_009136076.1
- Raphanus raphanistrum RrC11089_p3
Sequences
cDNA Sequence
- >AT3G24520.1
GTCAAGCAGCTTAAATCATCTATGACTTAAAATTATAATTAAGAAAAAACAATGCCTAAATATGCATATATTTCAAATGTATCACATAACTTGTGACATAAGAAAATATAAACAAAACAAAAAGGGCAAAAAAGACCTGAAAGCTTAGAGGCACACCTGCATAGGTCCCACAGTTCACTCGTGACACCGTAAAAGGCAAAACACGAACCCGCCACGTTATCACAAAAAGCAAGCCACGTCAATATAGTCTCACTGTCAACTACACTTAACTTACTATTTTCACATCTCATTTTCCTATCTTTATATAAACCCTCCAGGCTCCTCTTTAATTTCTTTACCACCACCAACAACAAACATATAAACCATAAGGAAAACAGAGAAAGAGAGAGATGGAGGACGACAATAGTAACAACAACAACAACAACAACGTGATCGCACCTTTCATCGTGAAAACATATCAGATGGTCAATGATCCTTCCACCGATTGGCTCATCACTTGGGGACCTGCTCACAACAGTTTCATAGTCGTTGATCCACTCGACTTCTCGCAACGAATCTTACCTGCTTATTTCAAACACAACAATTTCAGCAGTTTTGTTCGTCAACTCAACACCTATGGGTTTAGGAAAGTGGATCCGGACCGGTGGGAGTTTGCGAACGAGCATTTTCTAAGGGGACAGAAGCATTTGTTGAATAACATAGCGCGTAGGAAACACGCGCGGGGGATGTACGGTCAAGATTTGGAGGACGGTGAGATTGTGAGGGAGATCGAACGGTTAAAAGAAGAGCAGAGGGAGCTAGAGGCAGAGATTCAGAGGATGAACCGGAGGATCGAAGCGACGGAGAAGAGACCGGAGCAGATGATGGCGTTTCTTTACAAAGTCGTTGAAGATCCTGATCTTCTTCCAAGAATGATGCTCGAGAAAGAACGGACAAAGCAACAACAACAAGTTTCCGACAAGAAGAAGCGTCGTGTCACGATGTCGACGGTGAAGTCAGAGGAAGAAGAAGTGGAAGAAGATGAAGGGAGGGTCTTTAGGGTTATGTCATCATCAACACCGTCGCCGTCATCAACGGAGAATCTTTACCGGAATCATTCACCGGATGGGTGGATTGTTCCTATGACGCAAGGACAGTTTGGTAGTTACGAGACGGGTTTGGTGGCGAAGTCGATGCTCTCGAATTCAACGTCGTCGACGTCATCATCTTTGACGTCGACGTTTTCTTTGCCGGAGAGTGTTAACGGAGGAGGAGGAGGAGGATGTGGGAGTATTCAGGGAGAAAGAAGGTATAAAGAAACGGCGACGTTTGGAGGAGTGGTAGAGTCAAATCCACCAACAACACCGCCTTATCCATTTTCTCTGTTTCGAGGTGGCTTTTAGCGTTTAGCTTCACATGATATATGATCTTTAGACTTTATTATTGTTATATTATTATTATTATTTATTTTTTGTGTGTTTGTTCTTAATTATTTTATGTATAACCAAAAGAAAGAAAGAAAATAAGGACAGATCCATAGTTGAGTCAGTAGTCATCGTTTGTAGAAAGTTTTGACAGTATATAATTTCTGATTATATTTGTTAAAAGTTCATATGTTGACTTTGTTTTCCTTTTAAAAGTACTTTCAGGTGACTTGTGTAATATATTCACACTTGTAATAACAACAATTTTGATCTTCTTCACTACTTCAGTGTTTTGATTTTTGAATAAAGTATTATTGTAGCC
CDS Sequence
- >AT3G24520.1
ATGGAGGACGACAATAGTAACAACAACAACAACAACAACGTGATCGCACCTTTCATCGTGAAAACATATCAGATGGTCAATGATCCTTCCACCGATTGGCTCATCACTTGGGGACCTGCTCACAACAGTTTCATAGTCGTTGATCCACTCGACTTCTCGCAACGAATCTTACCTGCTTATTTCAAACACAACAATTTCAGCAGTTTTGTTCGTCAACTCAACACCTATGGGTTTAGGAAAGTGGATCCGGACCGGTGGGAGTTTGCGAACGAGCATTTTCTAAGGGGACAGAAGCATTTGTTGAATAACATAGCGCGTAGGAAACACGCGCGGGGGATGTACGGTCAAGATTTGGAGGACGGTGAGATTGTGAGGGAGATCGAACGGTTAAAAGAAGAGCAGAGGGAGCTAGAGGCAGAGATTCAGAGGATGAACCGGAGGATCGAAGCGACGGAGAAGAGACCGGAGCAGATGATGGCGTTTCTTTACAAAGTCGTTGAAGATCCTGATCTTCTTCCAAGAATGATGCTCGAGAAAGAACGGACAAAGCAACAACAACAAGTTTCCGACAAGAAGAAGCGTCGTGTCACGATGTCGACGGTGAAGTCAGAGGAAGAAGAAGTGGAAGAAGATGAAGGGAGGGTCTTTAGGGTTATGTCATCATCAACACCGTCGCCGTCATCAACGGAGAATCTTTACCGGAATCATTCACCGGATGGGTGGATTGTTCCTATGACGCAAGGACAGTTTGGTAGTTACGAGACGGGTTTGGTGGCGAAGTCGATGCTCTCGAATTCAACGTCGTCGACGTCATCATCTTTGACGTCGACGTTTTCTTTGCCGGAGAGTGTTAACGGAGGAGGAGGAGGAGGATGTGGGAGTATTCAGGGAGAAAGAAGGTATAAAGAAACGGCGACGTTTGGAGGAGTGGTAGAGTCAAATCCACCAACAACACCGCCTTATCCATTTTCTCTGTTTCGAGGTGGCTTTTAG
Protein Sequence
- >AT3G24520.1
MEDDNSNNNNNNNVIAPFIVKTYQMVNDPSTDWLITWGPAHNSFIVVDPLDFSQRILPAYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEHFLRGQKHLLNNIARRKHARGMYGQDLEDGEIVREIERLKEEQRELEAEIQRMNRRIEATEKRPEQMMAFLYKVVEDPDLLPRMMLEKERTKQQQQVSDKKKRRVTMSTVKSEEEEVEEDEGRVFRVMSSSTPSPSSTENLYRNHSPDGWIVPMTQGQFGSYETGLVAKSMLSNSTSSTSSSLTSTFSLPESVNGGGGGGCGSIQGERRYKETATFGGVVESNPPTTPPYPFSLFRGGF