Gene Details:
- Gene ID: AT3G24315
- Gene Symbol: AtSec20, SEC20
- Gene Name:
- Description: Sec20 family protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , pollen tube cell , pollen
Literature:
- MAIGO2 is involved in exit of seed storage proteins from the endoplasmic reticulum in Arabidopsis thaliana. DOI: 10.1105/tpc.106.046151 ; PMID: 17194767
- Comparative mapping of Brassica juncea and Arabidopsis thaliana using Intron Polymorphism (IP) markers: homoeologous relationships, diversification and evolution of the A, B and C Brassica genomes. DOI: 10.1186/1471-2164-9-113 ; PMID: 18315867
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- MAG2 and three MAG2-INTERACTING PROTEINs form an ER-localized complex to facilitate storage protein transport in Arabidopsis thaliana. DOI: 10.1111/tpj.12347 ; PMID: 24118572
- SNAREs Regulate Vesicle Trafficking During Root Growth and Development. DOI: 10.3389/fpls.2022.853251 ; PMID: 35360325
Sequences:
cDNA Sequence
- >AT3G24315.1
CTCTTCTTCCCCAGAAATCAAAATTTGAGGTGTCTTCTACAGATCAATATTGATCTCCAACACTCTCTGGTTCCCAGATCTTCTTCAACCTTATACCCTAGTTTCGCAATTTCATTCTCATTTTCTCCGCTCTTCATCTCTTTCGATCAACCAATTTACGACATGGATGAGGTTGTTGTTGAAGTGGAGAAGACGAAGAGAGAATGGGAAGAAGCGTACGAGAAGACGATTGGACATATTATCTCGATTCAACAGTACGGTAAATCAAGGAGGGGAGATGGAGGAGAAGAGAAGTTTTCGTTACAGAGGCTCAACGGATTGGCTCAGGATGGTCTCTCTCTTCTCAATTCCCTTCAATTCAATTTGGATCTGCTCGCACCTCAGCTTCCTTCTGATGATCAGGTTCAATCCACTCAGTCACTCCTTGAAACGTGGAAGAATCAATATCACAGTTTGAGGGTAAACTTGAGAAGTGCTAATTTGCAAGCTAAGGATAACATGAGGAAAGCAGCTCAAGAAGAGAGAGAGCTTCTCCTCGGTGGTGGAACAGAGTCTACAGTTCTCAGACGTAAACGACAAGCAAATGCTGGCGTGACATCCGATGCTGAAAGCATAACTGAAAGTCTCAGGCGTTCACGGCAGCTGATGGTTCAGGAGGTTGAACGAAGTACAAACACTCTCGTGGCTTTTGATGAATCTACTGGAGTACTTAAAAAAGCCGAGAGTGAATACAAAGGTCATAGATCTCTGTTGTCGAGGACCCGTAATCTACTTTCAACAATGCAGCGTCAAGATGTAATTGACAGGATAATCCTCATAGTTGGATTTTCTCTCTTTGTCTTTGCTGTTGTTTACGTTGTTTCAAAACGCATCGGAATTCTGAAACTGCAACGAATGGCTACTGCTGCTATTAAAGCTCAATTAGCTGGAAAAGCAGCAAATGGTGTAGGAGATGATGTTATGCCGCTCGGACAACAGTTTGATGGCAATACAGTTCCAACTGTTAATATTCCTCTACAACAACGCATGCACGATGAACTATGAAGCTCATTAGATGCTTGTAACATTGTTCAGGAATATATATATTACAAGTTGATGTTGTTACCTAGGAATGCTCTCTATATTACCACATGTTTCATGGACAACTGAAATTAAAGTTTCTTTAAGATATCACAAATAATTGTTTGGAAAATTGATCCGTATATCATTAACTAGGA
CDS Sequence
- >AT3G24315.1
ATGGATGAGGTTGTTGTTGAAGTGGAGAAGACGAAGAGAGAATGGGAAGAAGCGTACGAGAAGACGATTGGACATATTATCTCGATTCAACAGTACGGTAAATCAAGGAGGGGAGATGGAGGAGAAGAGAAGTTTTCGTTACAGAGGCTCAACGGATTGGCTCAGGATGGTCTCTCTCTTCTCAATTCCCTTCAATTCAATTTGGATCTGCTCGCACCTCAGCTTCCTTCTGATGATCAGGTTCAATCCACTCAGTCACTCCTTGAAACGTGGAAGAATCAATATCACAGTTTGAGGGTAAACTTGAGAAGTGCTAATTTGCAAGCTAAGGATAACATGAGGAAAGCAGCTCAAGAAGAGAGAGAGCTTCTCCTCGGTGGTGGAACAGAGTCTACAGTTCTCAGACGTAAACGACAAGCAAATGCTGGCGTGACATCCGATGCTGAAAGCATAACTGAAAGTCTCAGGCGTTCACGGCAGCTGATGGTTCAGGAGGTTGAACGAAGTACAAACACTCTCGTGGCTTTTGATGAATCTACTGGAGTACTTAAAAAAGCCGAGAGTGAATACAAAGGTCATAGATCTCTGTTGTCGAGGACCCGTAATCTACTTTCAACAATGCAGCGTCAAGATGTAATTGACAGGATAATCCTCATAGTTGGATTTTCTCTCTTTGTCTTTGCTGTTGTTTACGTTGTTTCAAAACGCATCGGAATTCTGAAACTGCAACGAATGGCTACTGCTGCTATTAAAGCTCAATTAGCTGGAAAAGCAGCAAATGGTGTAGGAGATGATGTTATGCCGCTCGGACAACAGTTTGATGGCAATACAGTTCCAACTGTTAATATTCCTCTACAACAACGCATGCACGATGAACTATGA
Protein Sequence
- >AT3G24315.1
MDEVVVEVEKTKREWEEAYEKTIGHIISIQQYGKSRRGDGGEEKFSLQRLNGLAQDGLSLLNSLQFNLDLLAPQLPSDDQVQSTQSLLETWKNQYHSLRVNLRSANLQAKDNMRKAAQEERELLLGGGTESTVLRRKRQANAGVTSDAESITESLRRSRQLMVQEVERSTNTLVAFDESTGVLKKAESEYKGHRSLLSRTRNLLSTMQRQDVIDRIILIVGFSLFVFAVVYVVSKRIGILKLQRMATAAIKAQLAGKAANGVGDDVMPLGQQFDGNTVPTVNIPLQQRMHDEL