Gene Details:

• Gene ID: AT3G24220
• Gene Symbol: ATNCED6, NCED6
• Gene Name: NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 6, nine-cis-epoxycarotenoid dioxygenase 6
• Description: nine-cis-epoxycarotenoid dioxygenase 6;(source:Araport11)
• TAIR Accession:
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT3G24220.1

Plant Ontology Annotations:

• PO:0009010  — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
• PO:0009046  — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
• PO:0000201  — chalazal cyst — ciste calazal (Spanish, exact), portion of chalazal cyst (exact), カラザの嚢 (Japanese, exact), chalazal endosperm cyst (related)
• PO:0009089  — endosperm — albumen (exact), endosperma (Spanish, exact), 内胚乳、胚乳 (Japanese, exact)
• PO:0025281  — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)

Function-related keywords:

• seed ,  flower ,  chalazal cyst ,  endosperm ,  seed ,  pollen

Literature:

• Abscisic acid regulation of gene expression during water-deficit stress in the era of the Arabidopsis genome.   DOI:  10.1046/j.1365-3040.2002.00746.x ;  PMID:  11841660
• Regulation of drought tolerance by gene manipulation of 9-cis-epoxycarotenoid dioxygenase, a key enzyme in abscisic acid biosynthesis in Arabidopsis.   DOI:  10.1046/j.1365-313x.2001.01096.x ;  PMID:  11532178
• Molecular characterization of the Arabidopsis 9-cis epoxycarotenoid dioxygenase gene family.   DOI:  10.1046/j.1365-313x.2003.01786.x ;  PMID:  12834401
• Abscisic acid biosynthesis and catabolism.   DOI:  10.1146/annurev.arplant.56.032604.144046 ;  PMID:  15862093
• Functional analysis of Arabidopsis NCED6 and NCED9 genes indicates that ABA synthesized in the endosperm is involved in the induction of seed dormancy.   DOI:  10.1111/j.1365-313X.2005.02622.x ;  PMID:  16412079
• Seed dormancy and ABA metabolism in Arabidopsis and barley: the role of ABA 8'-hydroxylase.   DOI:  10.1111/j.1365-313X.2006.02659.x ;  PMID:  16507085
• Regulation of hormone metabolism in Arabidopsis seeds: phytochrome regulation of abscisic acid metabolism and abscisic acid regulation of gibberellin metabolism.   DOI:  10.1111/j.1365-313X.2006.02881.x ;  PMID:  17010113
• PIL5, a phytochrome-interacting bHLH protein, regulates gibberellin responsiveness by binding directly to the GAI and RGA promoters in Arabidopsis seeds.   DOI:  10.1105/tpc.107.050153 ;  PMID:  17449805
• SOMNUS, a CCCH-type zinc finger protein in Arabidopsis, negatively regulates light-dependent seed germination downstream of PIL5.   DOI:  10.1105/tpc.108.058859 ;  PMID:  18487351
• Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana.   DOI:  10.1093/molbev/msq204 ;  PMID:  20736450
• Epoxycarotenoid cleavage by NCED5 fine-tunes ABA accumulation and affects seed dormancy and drought tolerance with other NCED family members.   DOI:  10.1111/j.1365-313X.2011.04887.x ;  PMID:  22171989
• Dormancy cycling in Arabidopsis seeds is controlled by seasonally distinct hormone-signaling pathways.   DOI:  10.1073/pnas.1116325108 ;  PMID:  22128331
• Proanthocyanidins inhibit seed germination by maintaining a high level of abscisic acid in Arabidopsis thaliana.   DOI:  10.1111/j.1744-7909.2012.01142.x ;  PMID:  22765383
• Temperature, light and nitrate sensing coordinate Arabidopsis seed dormancy cycling, resulting in winter and summer annual phenotypes.   DOI:  10.1111/tpj.12186 ;  PMID:  23590427
• The Arabidopsis MYB96 transcription factor plays a role in seed dormancy.   DOI:  10.1007/s11103-015-0283-4 ;  PMID:  25616734
• ABI4 mediates antagonistic effects of abscisic acid and gibberellins at transcript and protein levels.   DOI:  10.1111/tpj.13109 ;  PMID:  26708041
• Multi-omics Analysis Reveals Sequential Roles for ABA during Seed Maturation.   DOI:  10.1104/pp.19.00338 ;  PMID:  30948555
• REVERSAL OF RDO5 1, a Homolog of Rice Seed Dormancy4, Interacts with bHLH57 and Controls ABA Biosynthesis and Seed Dormancy in Arabidopsis.   DOI:  10.1105/tpc.20.00026 ;  PMID:  32213638
• The H3K27me3 Demethylase RELATIVE OF EARLY FLOWERING6 Suppresses Seed Dormancy by Inducing Abscisic Acid Catabolism.   DOI:  10.1104/pp.20.01255 ;  PMID:  33037128
• The phytochrome interacting proteins ERF55 and ERF58 repress light-induced seed germination in Arabidopsis thaliana.   DOI:  10.1038/s41467-022-29315-3 ;  PMID:  35351902
• Progressive chromatin silencing of ABA biosynthesis genes permits seed germination in Arabidopsis.   DOI:  10.1093/plcell/koac134 ;  PMID:  35522002
• Disruption of BG14 results in enhanced callose deposition in developing seeds and decreases seed longevity and seed dormancy in Arabidopsis.   DOI:  10.1111/tpj.16102 ;  PMID:  36625794
• The 9-cis-epoxycarotenoid cleavage reaction is the key regulatory step of abscisic acid biosynthesis in water-stressed bean.   DOI:  10.1073/pnas.96.26.15354 ;  PMID:  10611388
• Molecular characterization of the Arabidopsis 9-cis epoxycarotenoid dioxygenase gene family.   DOI:  10.1046/j.1365-313x.2003.01786.x ;  PMID:  12834401
• SOMNUS, a CCCH-type zinc finger protein in Arabidopsis, negatively regulates light-dependent seed germination downstream of PIL5.   DOI:  10.1105/tpc.108.058859 ;  PMID:  18487351

Sequences: