Gene Details:
- Gene ID: AT3G24120
- Gene Symbol: PHL2
- Gene Name: PHR1-like 2
- Description: Homeodomain-like superfamily protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , pollen tube cell , pollen
Literature:
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Arabidopsis PHL2 and PHR1 Act Redundantly as the Key Components of the Central Regulatory System Controlling Transcriptional Responses to Phosphate Starvation. DOI: 10.1104/pp.15.01336 ; PMID: 26586833
- Establishment of Expression in the SHORTROOT-SCARECROW Transcriptional Cascade through Opposing Activities of Both Activators and Repressors. DOI: 10.1016/j.devcel.2016.09.031 ; PMID: 27923776
- Functional Characterization of Arabidopsis PHL4 in Plant Response to Phosphate Starvation. DOI: 10.3389/fpls.2018.01432 ; PMID: 30327661
- Transcriptional regulation of nitrogen-associated metabolism and growth. DOI: 10.1038/s41586-018-0656-3 ; PMID: 30356219
- A PXY-Mediated Transcriptional Network Integrates Signaling Mechanisms to Control Vascular Development in Arabidopsis. DOI: 10.1105/tpc.19.00562 ; PMID: 31806676
- PHOSPHATE RESPONSE 1 family members act distinctly to regulate transcriptional responses to phosphate starvation. DOI: 10.1093/plphys/kiac521 ; PMID: 36417239
- Molecular mechanism of phosphorous signaling inducing anthocyanin accumulation in Arabidopsis. DOI: 10.1016/j.plaphy.2023.01.029 ; PMID: 36706691
- PHOSPHATE STARVATION RESPONSE1 (PHR1) interacts with JASMONATE ZIM-DOMAIN (JAZ) and MYC2 to modulate phosphate deficiency-induced jasmonate signaling in Arabidopsis. DOI: 10.1093/plcell/koad057 ; PMID: 36856677
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. DOI: 10.1093/molbev/msj051 ; PMID: 16280546
- Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. DOI: 10.1093/molbev/msj051 ; PMID: 16280546
Sequences:
cDNA Sequence
- >AT3G24120.2
AATACGTCCAAACTATATCCACCCGTCTCTTCGCTGTCCATAAATCCGGAGCCTGACCCGACGTTTGACCCGGATCCGAAACTCCCACAATCTCCATACCACCCAAATTCATCTCCCCTAAAGCTTTCTCTCACTTTCCCGGGAAAATCGGCGACCAAAATTGGAAAATGTACTCAGCGATTCGCTCGCTTCCACTCGATGGTGGACACGTTGGTGGTGACTACCATGGACCTCTTGACGGAACCAATCTTCCCGGTGACGCTTGTTTGGTTTTAACGACTGACCCTAAACCTCGTCTCCGGTGGACAACTGAGCTTCATGAGAGATTCGTTGACGCCGTTACTCAGCTCGGTGGTCCTGACAAAGCGACTCCCAAAACTATTATGAGAACAATGGGAGTGAAGGGTCTCACTCTCTACCACCTCAAATCACATCTTCAGAAATTCCGCCTAGGGAGGCAAGCTGGCAAAGAATCAACTGAGAACTCTAAAGATGCTTCTTGTGTAGGGGAGAGTCAGGACACAGGTTCATCTTCGACATCATCAATGAGAATGGCGCAGCAGGAGCAGAACGAGGGTTACCAAGTCACCGAAGCTCTACGTGCTCAGATGGAAGTCCAAAGAAGACTACACGATCAATTGGAGTATGGGCAGGTGCAACGGAGGCTCCAGCTGAGGATAGAGGCACAAGGAAAATACCTGCAATCGATTCTTGAAAAAGCTTGCAAGGCCTTTGACGAGCAAGCTGCTACTTTTGCTGGACTTGAGGCTGCTAGGGAAGAGCTATCAGAGCTAGCCATCAAAGTCTCCAATAGCTCTCAAGGAACATCAGTCCCGTACTTCGATGCAACAAAGATGATGATGATGCCATCGTTGTCAGAGCTTGCAGTAGCAATAGACAACAAAAACAACATCACAACCAACTGTTCAGTAGAAAGCTCTCTGACTTCCATCACACATGGGAGCTCTATATCTGCTGCATCAATGAAGAAGCGTCAACGTGGAGACAATTTGGGCGTAGGGTATGAATCAGGCTGGATTATGCCTAGTAGCACCATTGGATAAAGTTTAGGAGAGGGAAAAAGTTCATTATGGGAAAGGTAGAGATAAGATTTAACTCTTCTTTACTTGCTTTGAGGGGCCTGTATTATTATTCGATACAAACTTGTCATCACATTTTCATCTTAGCCTACTCATGTATATATATTTCAATGTTGAAGCTGAAGCTTTAGTGTTTCCTTTAACCTTTGCCTCTAATTATTCTTGTATTCAAGAGAAAGGTTTAAAGGTACAAACTATAAAGACATAAGAAAAAGATCTATTGATAATCTATAATAAACATTGAAATGATGAA - >AT3G24120.1
AATACGTCCAAACTATATCCACCCGTCTCTTCGCTGTCCATAAATCCGGAGCCTGACCCGACGTTTGACCCGGATCCGAAACTCCCACAATCTCCATACCACCCAAATTCATCTCCCCTAAAGCTTTCTCTCACTTTCCCGGGAAAATCGGCGACCAAAATTGGAAAATGTACTCAGCGATTCGCTCGCTTCCACTCGATGGTGGACACGTTGGTGGTGACTACCATGGACCTCTTGACGGAACCAATCTTCCCGGTGACGCTTGTTTGGTTTTAACGACTGACCCTAAACCTCGTCTCCGGTGGACAACTGAGCTTCATGAGAGATTCGTTGACGCCGTTACTCAGCTCGGTGGTCCTGACAAAGCGACTCCCAAAACTATTATGAGAACAATGGGAGTGAAGGGTCTCACTCTCTACCACCTCAAATCACATCTTCAGAAATTCCGCCTAGGGAGGCAAGCTGGCAAAGAATCAACTGAGAACTCTAAAGATGCTTCTTGTGTAGGGGAGAGTCAGGACACAGGTTCATCTTCGACATCATCAATGAGAATGGCGCAGCAGGAGCAGAACGAGGGTTACCAAGTCACCGAAGCTCTACGTGCTCAGATGGAAGTCCAAAGAAGACTACACGATCAATTGGAGTATGGGCAGGTGCAACGGAGGCTCCAGCTGAGGATAGAGGCACAAGGAAAATACCTGCAATCGATTCTTGAAAAAGCTTGCAAGGCCTTTGACGAGCAAGCTGCTACTTTTGCTGGACTTGAGGCTGCTAGGGAAGAGCTATCAGAGCTAGCCATCAAAGTCTCCAATAGCTCTCAAGGAACATCAGTCCCGTACTTCGATGCAACAAAGATGATGATGATGCCATCGTTGTCAGAGCTTGCAGTAGCAATAGACAACAAAAACAACATCACAACCAACTGTTCAGTAGAAAGCTCTCTGACTTCCATCACACATGGGAGCTCTATATCTGCTGCATCAATGAAGAAGCGTCAACGTGGAGACAATTTGGGCGTAGGGTATGAATCAGGCTGGATTATGCCTAGTAGCACCATTGGATAAAGTTTAGGAGAGGGAAAAAGTTCATTATGGGAAAGGTAGAGATAAGATTTAACTCTTCTTTACTTGCTTTGAGGGGCCTGTATTATTATTCGATACAAACTTGTCATCACATTTTCATCTTAGCCTACTCATGTATATATATTTCAATGTTGAAGCTGAAGCTTTAGTGTTTCCTTTAACCTTTGCCTCTAATTATTCTTGTATTCAAGAGAAAGGTTTAAAGGTACAAACTATAAAGACATAAGAAAAAGATCTATTGATAATCTATAATAAACATTGAAATGATGAA
CDS Sequence
- >AT3G24120.2
ATGTACTCAGCGATTCGCTCGCTTCCACTCGATGGTGGACACGTTGGTGGTGACTACCATGGACCTCTTGACGGAACCAATCTTCCCGGTGACGCTTGTTTGGTTTTAACGACTGACCCTAAACCTCGTCTCCGGTGGACAACTGAGCTTCATGAGAGATTCGTTGACGCCGTTACTCAGCTCGGTGGTCCTGACAAAGCGACTCCCAAAACTATTATGAGAACAATGGGAGTGAAGGGTCTCACTCTCTACCACCTCAAATCACATCTTCAGAAATTCCGCCTAGGGAGGCAAGCTGGCAAAGAATCAACTGAGAACTCTAAAGATGCTTCTTGTGTAGGGGAGAGTCAGGACACAGGTTCATCTTCGACATCATCAATGAGAATGGCGCAGCAGGAGCAGAACGAGGGTTACCAAGTCACCGAAGCTCTACGTGCTCAGATGGAAGTCCAAAGAAGACTACACGATCAATTGGAGTATGGGCAGGTGCAACGGAGGCTCCAGCTGAGGATAGAGGCACAAGGAAAATACCTGCAATCGATTCTTGAAAAAGCTTGCAAGGCCTTTGACGAGCAAGCTGCTACTTTTGCTGGACTTGAGGCTGCTAGGGAAGAGCTATCAGAGCTAGCCATCAAAGTCTCCAATAGCTCTCAAGGAACATCAGTCCCGTACTTCGATGCAACAAAGATGATGATGATGCCATCGTTGTCAGAGCTTGCAGTAGCAATAGACAACAAAAACAACATCACAACCAACTGTTCAGTAGAAAGCTCTCTGACTTCCATCACACATGGGAGCTCTATATCTGCTGCATCAATGAAGAAGCGTCAACGTGGAGACAATTTGGGCGTAGGGTATGAATCAGGCTGGATTATGCCTAGTAGCACCATTGGATAA - >AT3G24120.1
ATGTACTCAGCGATTCGCTCGCTTCCACTCGATGGTGGACACGTTGGTGGTGACTACCATGGACCTCTTGACGGAACCAATCTTCCCGGTGACGCTTGTTTGGTTTTAACGACTGACCCTAAACCTCGTCTCCGGTGGACAACTGAGCTTCATGAGAGATTCGTTGACGCCGTTACTCAGCTCGGTGGTCCTGACAAAGCGACTCCCAAAACTATTATGAGAACAATGGGAGTGAAGGGTCTCACTCTCTACCACCTCAAATCACATCTTCAGAAATTCCGCCTAGGGAGGCAAGCTGGCAAAGAATCAACTGAGAACTCTAAAGATGCTTCTTGTGTAGGGGAGAGTCAGGACACAGGTTCATCTTCGACATCATCAATGAGAATGGCGCAGCAGGAGCAGAACGAGGGTTACCAAGTCACCGAAGCTCTACGTGCTCAGATGGAAGTCCAAAGAAGACTACACGATCAATTGGAGTATGGGCAGGTGCAACGGAGGCTCCAGCTGAGGATAGAGGCACAAGGAAAATACCTGCAATCGATTCTTGAAAAAGCTTGCAAGGCCTTTGACGAGCAAGCTGCTACTTTTGCTGGACTTGAGGCTGCTAGGGAAGAGCTATCAGAGCTAGCCATCAAAGTCTCCAATAGCTCTCAAGGAACATCAGTCCCGTACTTCGATGCAACAAAGATGATGATGATGCCATCGTTGTCAGAGCTTGCAGTAGCAATAGACAACAAAAACAACATCACAACCAACTGTTCAGTAGAAAGCTCTCTGACTTCCATCACACATGGGAGCTCTATATCTGCTGCATCAATGAAGAAGCGTCAACGTGGAGACAATTTGGGCGTAGGGTATGAATCAGGCTGGATTATGCCTAGTAGCACCATTGGATAA
Protein Sequence
- >AT3G24120.2
MYSAIRSLPLDGGHVGGDYHGPLDGTNLPGDACLVLTTDPKPRLRWTTELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKFRLGRQAGKESTENSKDASCVGESQDTGSSSTSSMRMAQQEQNEGYQVTEALRAQMEVQRRLHDQLEYGQVQRRLQLRIEAQGKYLQSILEKACKAFDEQAATFAGLEAAREELSELAIKVSNSSQGTSVPYFDATKMMMMPSLSELAVAIDNKNNITTNCSVESSLTSITHGSSISAASMKKRQRGDNLGVGYESGWIMPSSTIG - >AT3G24120.1
MYSAIRSLPLDGGHVGGDYHGPLDGTNLPGDACLVLTTDPKPRLRWTTELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKFRLGRQAGKESTENSKDASCVGESQDTGSSSTSSMRMAQQEQNEGYQVTEALRAQMEVQRRLHDQLEYGQVQRRLQLRIEAQGKYLQSILEKACKAFDEQAATFAGLEAAREELSELAIKVSNSSQGTSVPYFDATKMMMMPSLSELAVAIDNKNNITTNCSVESSLTSITHGSSISAASMKKRQRGDNLGVGYESGWIMPSSTIG