Gene Details:
- Gene ID: AT3G24050
- Gene Symbol: GATA1
- Gene Name: GATA transcription factor 1
- Description: GATA transcription factor 1;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Global identification of target genes regulated by APETALA3 and PISTILLATA floral homeotic gene action. DOI: 10.1105/tpc.006353 ; PMID: 12509532
- Interaction of a GATA factor with cis-acting elements involved in light regulation of nuclear genes encoding chloroplast glyceraldehyde-3-phosphate dehydrogenase in Arabidopsis. DOI: 10.1016/s0006-291x(02)02892-9 ; PMID: 12504119
- Genomic analysis of the unfolded protein response in Arabidopsis shows its connection to important cellular processes. DOI: 10.1105/tpc.007609 ; PMID: 12566592
- Isolation, sequence analysis, and expression studies of florally expressed cDNAs in Arabidopsis. DOI: 10.1023/B:PLAN.0000019063.18097.62 ; PMID: 15010618
- The GATA family of transcription factors in Arabidopsis and rice. DOI: 10.1104/pp.103.037788 ; PMID: 15084732
- Genetic analysis of Arabidopsis GATA transcription factor gene family reveals a nitrate-inducible member important for chlorophyll synthesis and glucose sensitivity. DOI: 10.1111/j.1365-313X.2005.02568.x ; PMID: 16262716
- Conservation, convergence, and divergence of light-responsive, circadian-regulated, and tissue-specific expression patterns during evolution of the Arabidopsis GATA gene family. DOI: 10.1104/pp.106.090761 ; PMID: 17208962
- Transcriptional Regulation of Arabidopsis Polycomb Repressive Complex 2 Coordinates Cell-Type Proliferation and Differentiation. DOI: 10.1105/tpc.15.00744 ; PMID: 27650334
- Establishment of Expression in the SHORTROOT-SCARECROW Transcriptional Cascade through Opposing Activities of Both Activators and Repressors. DOI: 10.1016/j.devcel.2016.09.031 ; PMID: 27923776
- Transcriptional regulation of nitrogen-associated metabolism and growth. DOI: 10.1038/s41586-018-0656-3 ; PMID: 30356219
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
Sequences:
cDNA Sequence
- >AT3G24050.1
GCCGTTGATTTTGGTGACTAATATTAAACTCAGTGGACCGCGTTACACTTGATTGTGGCTTCAATATACGTTATAGGAAAAAGTGAATTTAAAAGGCAAAGGAAAAAAACCATTTTGTGTCATCCCCTTCCCCACTTCCAACCAAAATTAATTTAAAATGTCAAATATTTTTTCATTTTCCTCTTTTCGAAATTAAAGAAAACCCTAAACGCCGTTGTCTGATATTGAGAGAGAGAGAGAGATTAAAAACTTCTTCTGGTTCCTTTTATCAACATTTTTTCTCTCTCTTAAAACTTCGAAGCGATTTTTGATTTACAGACTATGGAAATGGAATCATTCATGGACGACCTTTTGAACTTCTCTGTACCGGAAGAGGAAGAAGACGACGACGAACATACGCAACCACCGAGGAATATTACTCGCCGGAAAACTGGATTACGGCCAACAGACTCCTTCGGTCTCTTTAATACCGACGACCTTGGAGTGGTTGAAGAAGAGGATTTGGAATGGATTTCAAACAAAAATGCTTTTCCGGTGATTGAAACATTCGTCGGTGTATTACCGTCGGAGCATTTTCCTATAACGTCTCTTCTGGAAAGAGAAGCGACTGAGGTAAAACAGCTGAGTCCGGTTTCAGTACTTGAGACGAGTAGCCATAGCTCCACAACGACTACCTCAAACAGTAGCGGCGGAAGTAACGGAAGCACGGCCGTGGCTACGACCACCACCACTCCAACAATAATGAGCTGTTGCGTTGGTTTTAAAGCGCCGGCTAAAGCGAGAAGCAAGCGTCGTCGTACAGGACGCCGTGATTTACGAGTTTTGTGGACAGGAAACGAGCAAGGAGGAATACAGAAGAAGAAGACGATGACTGTGGCGGCGGCTGCGTTGATTATGGGAAGGAAGTGTCAACACTGTGGAGCGGAGAAGACTCCGCAATGGAGGGCAGGACCAGCGGGGCCTAAGACTCTGTGTAACGCTTGTGGCGTGAGGTATAAGTCCGGGAGGCTAGTTCCGGAGTATCGTCCAGCGAACAGTCCAACTTTCACGGCGGAGTTACATTCGAATTCTCACCGGAAGATTGTAGAGATGAGGAAGCAGTATCAGTCCGGTGACGGTGACGGTGATCGGAAAGATTGTGGATAAAAAGTGATTAGGATTAATTTTTATTTTTTCGGAGAAACTTTTTTTTTTTTTTTTTCGTTTAATTTCTCTTTATTTGTTTTTAAAGTCTGTTTTAGGGTTTTGCAGTTGGAATTTAGGTTTTTAATTTTTTGCTTATCTTTTTTATTTGTGAAATTAGTGGTAATTACTTATTTAGGGAATATTATGGTCATGGAATGGAAGATAACTTTCTCATTTTACTGTTTGTTTGATTCTAATGGTAATTTTAAAAAATAGAAGAAAAAA
CDS Sequence
- >AT3G24050.1
ATGGAAATGGAATCATTCATGGACGACCTTTTGAACTTCTCTGTACCGGAAGAGGAAGAAGACGACGACGAACATACGCAACCACCGAGGAATATTACTCGCCGGAAAACTGGATTACGGCCAACAGACTCCTTCGGTCTCTTTAATACCGACGACCTTGGAGTGGTTGAAGAAGAGGATTTGGAATGGATTTCAAACAAAAATGCTTTTCCGGTGATTGAAACATTCGTCGGTGTATTACCGTCGGAGCATTTTCCTATAACGTCTCTTCTGGAAAGAGAAGCGACTGAGGTAAAACAGCTGAGTCCGGTTTCAGTACTTGAGACGAGTAGCCATAGCTCCACAACGACTACCTCAAACAGTAGCGGCGGAAGTAACGGAAGCACGGCCGTGGCTACGACCACCACCACTCCAACAATAATGAGCTGTTGCGTTGGTTTTAAAGCGCCGGCTAAAGCGAGAAGCAAGCGTCGTCGTACAGGACGCCGTGATTTACGAGTTTTGTGGACAGGAAACGAGCAAGGAGGAATACAGAAGAAGAAGACGATGACTGTGGCGGCGGCTGCGTTGATTATGGGAAGGAAGTGTCAACACTGTGGAGCGGAGAAGACTCCGCAATGGAGGGCAGGACCAGCGGGGCCTAAGACTCTGTGTAACGCTTGTGGCGTGAGGTATAAGTCCGGGAGGCTAGTTCCGGAGTATCGTCCAGCGAACAGTCCAACTTTCACGGCGGAGTTACATTCGAATTCTCACCGGAAGATTGTAGAGATGAGGAAGCAGTATCAGTCCGGTGACGGTGACGGTGATCGGAAAGATTGTGGATAA
Protein Sequence
- >AT3G24050.1
MEMESFMDDLLNFSVPEEEEDDDEHTQPPRNITRRKTGLRPTDSFGLFNTDDLGVVEEEDLEWISNKNAFPVIETFVGVLPSEHFPITSLLEREATEVKQLSPVSVLETSSHSSTTTTSNSSGGSNGSTAVATTTTTPTIMSCCVGFKAPAKARSKRRRTGRRDLRVLWTGNEQGGIQKKKTMTVAAAALIMGRKCQHCGAEKTPQWRAGPAGPKTLCNACGVRYKSGRLVPEYRPANSPTFTAELHSNSHRKIVEMRKQYQSGDGDGDRKDCG