Information report for AT3G23980
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
Functional Keywords
Literature and News
- Comparative mapping of Brassica juncea and Arabidopsis thaliana using Intron Polymorphism (IP) markers: homoeologous relationships, diversification and evolution of the A, B and C Brassica genomes. DOI: 10.1186/1471-2164-9-113 ; PMID: 18315867
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- The CURLY LEAF interacting protein BLISTER controls expression of polycomb-group target genes and cellular differentiation of Arabidopsis thaliana. DOI: 10.1105/tpc.109.073403 ; PMID: 20647345
- A nuclear-localized protein, KOLD SENSITIV-1, affects the expression of cold-responsive genes during prolonged chilling in Arabidopsis. DOI: 10.1016/j.jplph.2010.07.001 ; PMID: 20674078
- BLISTER-regulated vegetative growth is dependent on the protein kinase domain of ER stress modulator IRE1A in Arabidopsis thaliana. DOI: 10.1371/journal.pgen.1008563 ; PMID: 31869326
- BLISTER promotes seed maturation and fatty acid biosynthesis by interacting with WRINKLED1 to regulate chromatin dynamics in Arabidopsis. DOI: 10.1093/plcell/koac083 ; PMID: 35262735
Gene Resources
- UniProt: A0A178VL19
- EMBL: CACSHJ010000089, LUHQ01000003
- AlphaFoldDB: A0A178VL19
- EnsemblPlants: AT3G23980.1
- Gramene: AT3G23980.1
- KEGG: ath:AT3G23980
- Orthologous matrix: MPKQNDD
- ExpressionAtlas: AT3G23980
- InterPro: IPR044194
- PANTHER: PTHR47490, PTHR47490:SF2
- Gene3D: 1.10.287.1490
- OrthoDB: A0A178VL19
- SWISS-MODEL: A0A178VL19
Sequences
cDNA Sequence
- >AT3G23980.1
ATTTTTTTTTCTCTTAATTTTCTTACTACCTAAACATTCTCTCTTATTTTTCAAAAAATACAACAGACTATGAACAAATACATTACACACTTCTTATACATTTTTAAAATCAAAAGCTACATGAAATCTAAATTTCACCAAACAAACAATGAGTGAACGTTAAAAAAAAATTGCAACCAAACAAAGAAAAAAAAAAACGAGTAAAAACGTTTAATTCAAAGCAGAGAAGGGGAAAATAAAAAGAAAGGGATCTGTTAAAAAGAGATCTGACGAACAAAATTAATATTTGAACTTCGTCCTCCTCTCCTTCAGATCGAAAACCCTAATTTCGATTTCTTTGTTTGACAATTCCATCGATTTTTGAACTTGTTTTCTCGAGATCTCCATCTGTTTCCTCCACCCCGAAATTTCAACGATATCTTCTCGATCTGTGCGTCAGGATCTGGGCTTTTTGAAATTTGAGTTTTCTCCTCAATCATAACAACGGCGATTTCCGGGAATGGCTTTGGCTAAAACGGATTCAATGGTAATTGAAAAAGCATTGATTTGAAGCAATTGGAGAGGGAACATTTCCCTCTGCGAGATTTCGAGTATTTTTCAATGGCATCAGCTACTAGTTCCCGGAGGCAAGAGGACGTTGAAGCTGGACGCCGTAAGCTTGAGCAGTTTCGTAAACGAAAAGCAGCAGAAAAAGCTAAAAAGGCATCACAGAATACACAACCTGTTGATAATAGCCAACAAAGTGTCATAGATTCAGATGGAGCTGGTGCATCTATCTCTAATGGACCTCTCAAGCAATCTGCTGAATCTACCTCAAATGAAACCCATACCAAAGATGTATATAATTTATCATTTTCGAATACAGCAATGGATGATGGAAGCAAAGAAAGAAGTAGACAAGATGATGGTCAGGAATCAGTGGGCAAAGTTGATTTTTCTAATAGCTTAGAGTTGATAGGTTCATCGAAGGACTTAACAGTGAATACTAGGCCTGAAGTTGTACCTTATAGCAATATAGACAAGCAATCGAGTGAAAGTTTTGATCGTGCTTCTACTCTAAGAGAAACTGCATCTCTTTTTTCTGGAACCTCAATGCAAATGGATGGTTTCATTCACGGCAGTGGATTAACCTCATCCAGAAAAGACTCTCTACAACCTACTACCAGGATGGCAGGGTCTTTTGACGAAGTTGCCAAAAACCAACAGGGAAGTGGTGAACTAGGAGGTAGCATTGTGCAGAAGCCAACTTTGTCAAGCAGTTATTTGTTTAATTCTCCAGACACATCATCTCGACCTTCTGAACCTTCAGATTTCAGTGTGAATATCACAAGCTCTTCACCATTAAACTCAGCTAAGAGTGAAGCAACTGTGAAGAGATCTCGTCCGTCTTTCCTTGATTCCCTCAATATATCAAGAGCTCCAGAGACTCAATATCAACACCCTGAGATACAAGCGGATTTGGTTACATCCAGTGGTTCCCAACTATCTGGCAGTGATGGTTTTGGGCCATCTTATATATCAGGGAGAAGAGACAGTAATGGACCATCATCTTTGACAAGCGGAGCATCTGATTATCCTAATCCATTTGAAAAGTTTCGGAGTTCTTTATATCCTGCTGCCAATGGAGTAATGCCAGGTTTTACTGATTTCTCTATGCCAAAACAAAATGATGATTTTACTGCTCTGGAACAGCATATTGAGGATTTAACACAAGAAAAGTTTTCACTGCAAAGGGATCTTGATGCTTCACGTGCACTGGCAGAATCCTTAGCATCAGAGAATTCTTCAATGACAGACACTTATAACCAGCAGAGAGGTCTTGTCAACCAACTAAAAGATGACATGGAGAGGCTATATCAACAGATCCAAGCCCAAATGGGCGAACTTGAGTCTGTCAGGGTTGAGTATGCAAACGCGCAGCTAGAATGTAATGCTGCTGATGAGCGTTCCCAAATACTGGCTTCTGAAGTCATCAGTTTGGAAGATAAGGCTCTCAGACTCAGATCTAATGAGTTAAAGCTGGAGAGGGAACTGGAGAAGGCACAAACAGAAATGTTATCTTACAAGAAAAAATTGCAGAGCTTAGAGAAAGATCGTCAAGATTTACAATCTACTATTAAAGCTCTTCAGGAAGAGAAGAAGGTCCTACAAACTATGGTGCAGAAAGCTTCATCTGGTGGAAAATCCACTGATCTGAGTAAAAACTCAACTAGCAGAAAGAACGTGTCAACCTCTACAGAAGGTCTTGCAATCTCAGATACTACGCCAGAGAGCTCCAACCAGGAAACAGATTCTACTACTCTGCTCGAAAGTGATTCATCTAATACAGCTATCATTCCTGAAACTAGACAATTAACTCTTGAAGGCTTTTCATTGAGCGTCCCAGCTGATCAGATGAGAGTGATTCATAACATTAATACGCTGATTGCTGAGTTGGCAATTGAGAAGGAAGAACTGGTGCAAGCACTGTCATCTGAGTTATCTCGAAGTGCGCATGTGCAGGAGCTGAACAAAGAGTTATCCAGAAAACTTGAAGCGCAGACGCAAAGGTTAGAGCTTGTAACAGCGCAGAAGATGGCCATAGACAATGTTTCACCAGAAAAGCAGCAGCCGGACACTCATGTTGTTCAAGAGAGAACACCGATTGCAGATGAAGGCGATGAGGTGGTAGAAAGGGTTCTAGGATGGATCATGAAGATGTTCCCAGGAGGACCGTCGAAAAGAAGGACAAGCAAGCTTCTCTAATGCATGGATGGCTTGCTCAGTCGTGACCCTTGTTGCCATTCTGTATATCCCGGGCACAGCCATGGATTGCTTCTTCTCCTTTAGTTTTGGAAGAATTCATTTGGTTCTTTTGATCCAAAATTTTGGATTTCATTGGATTGAGCAAAAATGGTATAGTGAGAAACACCATGAACTTGAAGAGTTCCAAATGGATAGAGGAGACTCGGAAGCTTAAACAGAGAGAAAGGTAGTTGTTATATGAGTGCGTTTTTGTCTGAATTTTGTAATTGTTGATTATATAGCCAAGTTAAAGTGTTCCTCCTAGCAAATATAATTTACCAAGAAAAAATCTTGTATGGTTTCGGATATATTTTATCTTCTCGTTTTAAATTGAAGACTTGATCAAACTATGAAATACAAGTGTTA
CDS Sequence
- >AT3G23980.1
ATGGCATCAGCTACTAGTTCCCGGAGGCAAGAGGACGTTGAAGCTGGACGCCGTAAGCTTGAGCAGTTTCGTAAACGAAAAGCAGCAGAAAAAGCTAAAAAGGCATCACAGAATACACAACCTGTTGATAATAGCCAACAAAGTGTCATAGATTCAGATGGAGCTGGTGCATCTATCTCTAATGGACCTCTCAAGCAATCTGCTGAATCTACCTCAAATGAAACCCATACCAAAGATGTATATAATTTATCATTTTCGAATACAGCAATGGATGATGGAAGCAAAGAAAGAAGTAGACAAGATGATGGTCAGGAATCAGTGGGCAAAGTTGATTTTTCTAATAGCTTAGAGTTGATAGGTTCATCGAAGGACTTAACAGTGAATACTAGGCCTGAAGTTGTACCTTATAGCAATATAGACAAGCAATCGAGTGAAAGTTTTGATCGTGCTTCTACTCTAAGAGAAACTGCATCTCTTTTTTCTGGAACCTCAATGCAAATGGATGGTTTCATTCACGGCAGTGGATTAACCTCATCCAGAAAAGACTCTCTACAACCTACTACCAGGATGGCAGGGTCTTTTGACGAAGTTGCCAAAAACCAACAGGGAAGTGGTGAACTAGGAGGTAGCATTGTGCAGAAGCCAACTTTGTCAAGCAGTTATTTGTTTAATTCTCCAGACACATCATCTCGACCTTCTGAACCTTCAGATTTCAGTGTGAATATCACAAGCTCTTCACCATTAAACTCAGCTAAGAGTGAAGCAACTGTGAAGAGATCTCGTCCGTCTTTCCTTGATTCCCTCAATATATCAAGAGCTCCAGAGACTCAATATCAACACCCTGAGATACAAGCGGATTTGGTTACATCCAGTGGTTCCCAACTATCTGGCAGTGATGGTTTTGGGCCATCTTATATATCAGGGAGAAGAGACAGTAATGGACCATCATCTTTGACAAGCGGAGCATCTGATTATCCTAATCCATTTGAAAAGTTTCGGAGTTCTTTATATCCTGCTGCCAATGGAGTAATGCCAGGTTTTACTGATTTCTCTATGCCAAAACAAAATGATGATTTTACTGCTCTGGAACAGCATATTGAGGATTTAACACAAGAAAAGTTTTCACTGCAAAGGGATCTTGATGCTTCACGTGCACTGGCAGAATCCTTAGCATCAGAGAATTCTTCAATGACAGACACTTATAACCAGCAGAGAGGTCTTGTCAACCAACTAAAAGATGACATGGAGAGGCTATATCAACAGATCCAAGCCCAAATGGGCGAACTTGAGTCTGTCAGGGTTGAGTATGCAAACGCGCAGCTAGAATGTAATGCTGCTGATGAGCGTTCCCAAATACTGGCTTCTGAAGTCATCAGTTTGGAAGATAAGGCTCTCAGACTCAGATCTAATGAGTTAAAGCTGGAGAGGGAACTGGAGAAGGCACAAACAGAAATGTTATCTTACAAGAAAAAATTGCAGAGCTTAGAGAAAGATCGTCAAGATTTACAATCTACTATTAAAGCTCTTCAGGAAGAGAAGAAGGTCCTACAAACTATGGTGCAGAAAGCTTCATCTGGTGGAAAATCCACTGATCTGAGTAAAAACTCAACTAGCAGAAAGAACGTGTCAACCTCTACAGAAGGTCTTGCAATCTCAGATACTACGCCAGAGAGCTCCAACCAGGAAACAGATTCTACTACTCTGCTCGAAAGTGATTCATCTAATACAGCTATCATTCCTGAAACTAGACAATTAACTCTTGAAGGCTTTTCATTGAGCGTCCCAGCTGATCAGATGAGAGTGATTCATAACATTAATACGCTGATTGCTGAGTTGGCAATTGAGAAGGAAGAACTGGTGCAAGCACTGTCATCTGAGTTATCTCGAAGTGCGCATGTGCAGGAGCTGAACAAAGAGTTATCCAGAAAACTTGAAGCGCAGACGCAAAGGTTAGAGCTTGTAACAGCGCAGAAGATGGCCATAGACAATGTTTCACCAGAAAAGCAGCAGCCGGACACTCATGTTGTTCAAGAGAGAACACCGATTGCAGATGAAGGCGATGAGGTGGTAGAAAGGGTTCTAGGATGGATCATGAAGATGTTCCCAGGAGGACCGTCGAAAAGAAGGACAAGCAAGCTTCTCTAA
Protein Sequence
- >AT3G23980.1
MASATSSRRQEDVEAGRRKLEQFRKRKAAEKAKKASQNTQPVDNSQQSVIDSDGAGASISNGPLKQSAESTSNETHTKDVYNLSFSNTAMDDGSKERSRQDDGQESVGKVDFSNSLELIGSSKDLTVNTRPEVVPYSNIDKQSSESFDRASTLRETASLFSGTSMQMDGFIHGSGLTSSRKDSLQPTTRMAGSFDEVAKNQQGSGELGGSIVQKPTLSSSYLFNSPDTSSRPSEPSDFSVNITSSSPLNSAKSEATVKRSRPSFLDSLNISRAPETQYQHPEIQADLVTSSGSQLSGSDGFGPSYISGRRDSNGPSSLTSGASDYPNPFEKFRSSLYPAANGVMPGFTDFSMPKQNDDFTALEQHIEDLTQEKFSLQRDLDASRALAESLASENSSMTDTYNQQRGLVNQLKDDMERLYQQIQAQMGELESVRVEYANAQLECNAADERSQILASEVISLEDKALRLRSNELKLERELEKAQTEMLSYKKKLQSLEKDRQDLQSTIKALQEEKKVLQTMVQKASSGGKSTDLSKNSTSRKNVSTSTEGLAISDTTPESSNQETDSTTLLESDSSNTAIIPETRQLTLEGFSLSVPADQMRVIHNINTLIAELAIEKEELVQALSSELSRSAHVQELNKELSRKLEAQTQRLELVTAQKMAIDNVSPEKQQPDTHVVQERTPIADEGDEVVERVLGWIMKMFPGGPSKRRTSKLL