Information report for AT3G23800
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Functional Keywords
Literature and News
- Syntenic relationships between Medicago truncatula and Arabidopsis reveal extensive divergence of genome organization. DOI: 10.1104/pp.102.016436 ; PMID: 12644654
- Transcriptome analysis reveals specific modulation of abscisic acid signaling by ROP10 small GTPase in Arabidopsis. DOI: 10.1104/pp.105.068064 ; PMID: 16258012
- Overexpression of AtCpNifS enhances selenium tolerance and accumulation in Arabidopsis. DOI: 10.1104/pp.105.068684 ; PMID: 16244144
- Mapping quantitative trait loci associated with selenate tolerance in Arabidopsis thaliana. DOI: 10.1111/j.1469-8137.2006.01635.x ; PMID: 16539601
- Gene expression programs during shoot, root, and callus development in Arabidopsis tissue culture. DOI: 10.1104/pp.106.081240 ; PMID: 16648215
- Genome-wide expression profiling of ARABIDOPSIS RESPONSE REGULATOR 7(ARR7) overexpression in cytokinin response. DOI: 10.1007/s00438-006-0177-x ; PMID: 17061125
- The Arabidopsis putative selenium-binding protein family: expression study and characterization of SBP1 as a potential new player in cadmium detoxification processes. DOI: 10.1104/pp.107.114033 ; PMID: 18354042
Gene Resources
- UniProt: A0A178VEQ9
- EMBL: CACRSJ010000106, LR881468, LUHQ01000003
- AlphaFoldDB: A0A178VEQ9
- EnsemblPlants: AT3G23800.1
- Gramene: AT3G23800.1
- KEGG: ath:AT3G23800
- Orthologous matrix: GYPHTSH
- ExpressionAtlas: AT3G23800
- InterPro: IPR008826
- PANTHER: PTHR23300, PTHR23300:SF0
- SUPFAM: SSF75011
- SWISS-MODEL: A0A178VEQ9
Homologs
- Oryza sativa OsSBP
Sequences
cDNA Sequence
- >AT3G23800.1
GTGCATAAATACATTATCTATGAGACAAAGAAACGTGATAGGTTATTGTTTTTTCTTGTTTGCGTCTGGCATATGTATGTATAAAACCAAATATCAAGCAGAACATATGCGATTTTCAAAATGTGGGCGGTGCTGAAAACATATATTAGTTTACTCCAACTTGCAGAATATTTGAGTATATTAATGCAAAAACAGTAAACGCAAGAGCAGGTGCATTACTAGCTAAGACAGCTTGGTTGAGAGATAGAGACGAAAATGGAAGCGGCGATGAACAACCACGATGGAGACTGCTGCAAGAGCGGGCCGGGTTATGCGACACCCCTCCTCGCGATGTCTGGTCCACGAGAAAAACTCATCTATGTTGCTGCCATATACACTGGAACCGGGCAAGCGAAGCCAGATTACTTAGCTACTGTGGATGTGGAACCGAGTTCATCCACATACTCGAGTGTTATCCACAGATTACCAATGCCTTACCTTGAAGATGAACTTCATCACTCAGGCTGGAACTCATGTAGCTCTTGCTATGGTGATTCTTCTTGCGAGAGACGTTATCTCATCTTGCCTTCTCTTCTGTCTGGTCGTATTTACGTGATCGATACGAAAACAAACCCGAGGGAACCATCTTTGCACAAATTCGTGGACCCTGCAGAGGTTTTGGAGAAGACGGGGTTGGCTTATCCGCATCAGCCTCATTGCTTAGCTTCCGGAGACGTTCTTGTGTCTTGTCTTGGAGACGAAGATGGAAACGCAGAAGGCAGTGGGTTTCTCTTACTTGATTCCGAGTTTAACATCAAAGGAAGGTGGGAGAAGGATGGAAACAGTCCTTTGTATGGGTATGATTTCTGGTACCAACCTCGGCATAAGACGATGATCAGTACCTCATGGGGAGCCCCGGCCGCGTTTACCAAAGGATTTGACCTCAAAGACGTCTCTGATGGCTTATATGGAAAGCATCTACATGTCTATAGCTGGCCCCAAGGAGAATTGAAACAGATTCTTGACCTTGGTGATACCGGACTTTTACCCTTAGAGGTAAGATTCTTGCATGAGCCGGATAAAGCTACGGGATTTGCAGGGTGTGCGTTGTCGAGTACTTTAGTAAGATTTTTCAAGAACGATGATGAAACATGGAGCCACGAGGTGGCTATATCAGTTGAACCTCTGAAAGTTGAAAACTGGATTCTCCCAGAAATGCCAGGGCTTATCACCGACTTTCTAATCTCACTTGACGACCGATTCCTCTATTGTTCCAACTGGCTTCATGGAGATATTCGTCAGTACAACATCGAGGACCCGAAAACCCCTGTTTTAACTGGTCAAATACATGTAGGCGGGCTAGTCCAAAAGGGAAGTCTTGTCTTGGCCTTAGGAGAAGAAGGAAAAGCATTTCAGTTTGATGTCCCTAAGATCAAGGGTCAGCGTCTAAGAGGAGGTCCTCAGATGTTTCAGCTGAGCCTAGATGGGAAGCGATTGTACGTGACGAACTCGCTGTTTAGTGTTTGGGACAGACAGTTTTACCCGGAACTTGTGGAGAAAGGGTCACACATGTTGCAGATAGATGTTGATACAGATAAAGGTGGTCTCTCCATAAACCCTAACTTCTTCGTCGACTTTGGGACCGAACCGGATGGTCCTTCGCTCGCTCACGAGATGAGATATCCGGGTGGCGACTGCACCTCAGATATCTGGGTTTAGTTTTTTCGCTAAATCAAGGATTTCTATGGAAATCGGAACAGAATTCAGAATTGTGTTGAGTGTGATCAATCTAATAATGGGTAATGTCACATGTGTGAGTGTGATCAATCTAATAAATGTTGATTACTTGCAAAATACACTTGTGAGTAATAATGATGGTCAAAGACGCAATGGAATTTAATAAAGCGAACCAACACTAAGATCGTATTCATATCATGTATGAAACTAAACAACATCACTCCTCTGTTTCTGTTCTGAAAAGTTCTCAAGTTTTGTATGTCAC - >AT3G23800.2
GTGCATAAATACATTATCTATGAGACAAAGAAACGTGATAGGTTATTGTTTTTTCTTGTTTGCGTCTGGCATATGTATGTATAAAACCAAATATCAAGCAGAACATATGCGATTTTCAAAATGTGGGCGGTGCTGAAAACATATATTAGTTTACTCCAACTTGCAGAATATTTGAGTATATTAATGCAAAAACAGTAAACGCAAGAGCAGGTGCATTACTAGCTAAGACAGCTTGGTTGAGAGATAGAGACGAAAATGGAAGCGGCGATGAACAACCACGATGGAGACTGCTGCAAGAGCGGGCCGGGTTATGCGACACCCCTCCTCGCGATGTCTGGTCCACGAGAAAAACTCATCTATGTTGCTGCCATATACACTGGAACCGGGCAAGCGAAGCCAGATTACTTAGCTACTGTGGATGTGGAACCGAGTTCATCCACATACTCGAGTGTTATCCACAGATTACCAATGCCTTACCTTGAAGATGAACTTCATCACTCAGGCTGGAACTCATGTAGCTCTTGCTATGGTGATTCTTCTTGCGAGAGACGTTATCTCATCTTGCCTTCTCTTCTGTCTGGTCGTATTTACGTGATCGATACGAAAACAAACCCGAGGGAACCATCTTTGCACAAATTCGTGGACCCTGCAGAGGTTTTGGAGAAGACGGGGTTGGCTTATCCGCATCAGCCTCATTGCTTAGCTTCCGGAGACGTTCTTGTGTCTTGTCTTGGAGACGAAGATGGAAACGCAGAAGGCAGTGGGTTTCTCTTACTTGATTCCGAGTTTAACATCAAAGGAAGGTGGGAGAAGGATGGAAACAGTCCTTTGTATGGGTATGATTTCTGGTACCAACCTCGGCATAAGACGATGATCAGTACCTCATGGGGAGCCCCGGCCGCGTTTACCAAAGGATTTGACCTCAAAGACGTCTCTGATGGCTTATATGGAAAGCATCTACATGTCTATAGCTGGCCCCAAGGAGAATTGAAACAGATTCTTGACCTTGGTGATACCGGACTTTTACCCTTAGAGGTAAGATTCTTGCATGAGCCGGATAAAGCTACGGGATTTGCAGGGTGTGCGTTGTCGAGTACTTTAGTAAGATTTTTCAAGAACGATGATGAAACATGGAGCCACGAGGTGGCTATATCAGTTGAACCTCTGAAAGTTGAAAACTGGATTCTCCCAGAAATGCCAGGGCTTATCACCGACTTTCTAATCTCACTTGACGACCGATTCCTCTATTGTTCCAACTGGCTTCATGGAGATATTCGTCAGTACAACATCGAGGACCCGAAAACCCCTGTTTTAACTGGTCAAATACATGTAGGCGGGCTAGTCCAAAAGGGAAGTCTTGTCTTGGCCTTAGGAGAAGAAGGAAAAGCATTTCAGTTTGATGTCCCTAAGATCAAGGGTCAGCGTCTAAGAGGAGGTCCTCAGATGTTTCAGCTGAGCCTAGATGGGAAGCGATTGTACGTGACGAACTCGCTGTTTAGTGTTTGGGACAGACAGTTTTACCCGGAACTTGTGGAGAAAGGGTCACACATGTTGCAGATAGATGTTGATACAGATAAAGGTGGTCTCTCCATAAACCCTAACTTCTTCGTCGACTTTGGGACCGAACCGGATGGTCCTTCGCTCGCTCACGAGATGAGATATCCGGGTGGCGACTGCACCTCAGATATCTGGGTTTAGTTTTTTCGCTAAATCAAGGATTTCTATGGAAATCGGAACAGAATTCAGAATTGTGTTGAGTGTGATCAATCTAATAATGGGTAATGTCACATGTGTGAGTGTGATCAATCTAATAAATGTTGATTACTTGCAAAATACACTTGTGAGTAATAATGATGGTCAAAGACGCAATGGAATTTAATAAAGCGAACCAACACTAAGATCGTATTCATATCATGTATGAAACTAAACAACATCACTCCTCTGTTTCTGTTCTGAAAAGTTCTCAAGTTTTGTATGTCAC
CDS Sequence
- >AT3G23800.1
ATGGAAGCGGCGATGAACAACCACGATGGAGACTGCTGCAAGAGCGGGCCGGGTTATGCGACACCCCTCCTCGCGATGTCTGGTCCACGAGAAAAACTCATCTATGTTGCTGCCATATACACTGGAACCGGGCAAGCGAAGCCAGATTACTTAGCTACTGTGGATGTGGAACCGAGTTCATCCACATACTCGAGTGTTATCCACAGATTACCAATGCCTTACCTTGAAGATGAACTTCATCACTCAGGCTGGAACTCATGTAGCTCTTGCTATGGTGATTCTTCTTGCGAGAGACGTTATCTCATCTTGCCTTCTCTTCTGTCTGGTCGTATTTACGTGATCGATACGAAAACAAACCCGAGGGAACCATCTTTGCACAAATTCGTGGACCCTGCAGAGGTTTTGGAGAAGACGGGGTTGGCTTATCCGCATCAGCCTCATTGCTTAGCTTCCGGAGACGTTCTTGTGTCTTGTCTTGGAGACGAAGATGGAAACGCAGAAGGCAGTGGGTTTCTCTTACTTGATTCCGAGTTTAACATCAAAGGAAGGTGGGAGAAGGATGGAAACAGTCCTTTGTATGGGTATGATTTCTGGTACCAACCTCGGCATAAGACGATGATCAGTACCTCATGGGGAGCCCCGGCCGCGTTTACCAAAGGATTTGACCTCAAAGACGTCTCTGATGGCTTATATGGAAAGCATCTACATGTCTATAGCTGGCCCCAAGGAGAATTGAAACAGATTCTTGACCTTGGTGATACCGGACTTTTACCCTTAGAGGTAAGATTCTTGCATGAGCCGGATAAAGCTACGGGATTTGCAGGGTGTGCGTTGTCGAGTACTTTAGTAAGATTTTTCAAGAACGATGATGAAACATGGAGCCACGAGGTGGCTATATCAGTTGAACCTCTGAAAGTTGAAAACTGGATTCTCCCAGAAATGCCAGGGCTTATCACCGACTTTCTAATCTCACTTGACGACCGATTCCTCTATTGTTCCAACTGGCTTCATGGAGATATTCGTCAGTACAACATCGAGGACCCGAAAACCCCTGTTTTAACTGGTCAAATACATGTAGGCGGGCTAGTCCAAAAGGGAAGTCTTGTCTTGGCCTTAGGAGAAGAAGGAAAAGCATTTCAGTTTGATGTCCCTAAGATCAAGGGTCAGCGTCTAAGAGGAGGTCCTCAGATGTTTCAGCTGAGCCTAGATGGGAAGCGATTGTACGTGACGAACTCGCTGTTTAGTGTTTGGGACAGACAGTTTTACCCGGAACTTGTGGAGAAAGGGTCACACATGTTGCAGATAGATGTTGATACAGATAAAGGTGGTCTCTCCATAAACCCTAACTTCTTCGTCGACTTTGGGACCGAACCGGATGGTCCTTCGCTCGCTCACGAGATGAGATATCCGGGTGGCGACTGCACCTCAGATATCTGGGTTTAG - >AT3G23800.2
ATGGAAGCGGCGATGAACAACCACGATGGAGACTGCTGCAAGAGCGGGCCGGGTTATGCGACACCCCTCCTCGCGATGTCTGGTCCACGAGAAAAACTCATCTATGTTGCTGCCATATACACTGGAACCGGGCAAGCGAAGCCAGATTACTTAGCTACTGTGGATGTGGAACCGAGTTCATCCACATACTCGAGTGTTATCCACAGATTACCAATGCCTTACCTTGAAGATGAACTTCATCACTCAGGCTGGAACTCATGTAGCTCTTGCTATGGTGATTCTTCTTGCGAGAGACGTTATCTCATCTTGCCTTCTCTTCTGTCTGGTCGTATTTACGTGATCGATACGAAAACAAACCCGAGGGAACCATCTTTGCACAAATTCGTGGACCCTGCAGAGGTTTTGGAGAAGACGGGGTTGGCTTATCCGCATCAGCCTCATTGCTTAGCTTCCGGAGACGTTCTTGTGTCTTGTCTTGGAGACGAAGATGGAAACGCAGAAGGCAGTGGGTTTCTCTTACTTGATTCCGAGTTTAACATCAAAGGAAGGTGGGAGAAGGATGGAAACAGTCCTTTGTATGGGTATGATTTCTGGTACCAACCTCGGCATAAGACGATGATCAGTACCTCATGGGGAGCCCCGGCCGCGTTTACCAAAGGATTTGACCTCAAAGACGTCTCTGATGGCTTATATGGAAAGCATCTACATGTCTATAGCTGGCCCCAAGGAGAATTGAAACAGATTCTTGACCTTGGTGATACCGGACTTTTACCCTTAGAGGTAAGATTCTTGCATGAGCCGGATAAAGCTACGGGATTTGCAGGGTGTGCGTTGTCGAGTACTTTAGTAAGATTTTTCAAGAACGATGATGAAACATGGAGCCACGAGGTGGCTATATCAGTTGAACCTCTGAAAGTTGAAAACTGGATTCTCCCAGAAATGCCAGGGCTTATCACCGACTTTCTAATCTCACTTGACGACCGATTCCTCTATTGTTCCAACTGGCTTCATGGAGATATTCGTCAGTACAACATCGAGGACCCGAAAACCCCTGTTTTAACTGGTCAAATACATGTAGGCGGGCTAGTCCAAAAGGGAAGTCTTGTCTTGGCCTTAGGAGAAGAAGGAAAAGCATTTCAGTTTGATGTCCCTAAGATCAAGGGTCAGCGTCTAAGAGGAGGTCCTCAGATGTTTCAGCTGAGCCTAGATGGGAAGCGATTGTACGTGACGAACTCGCTGTTTAGTGTTTGGGACAGACAGTTTTACCCGGAACTTGTGGAGAAAGGGTCACACATGTTGCAGATAGATGTTGATACAGATAAAGGTGGTCTCTCCATAAACCCTAACTTCTTCGTCGACTTTGGGACCGAACCGGATGGTCCTTCGCTCGCTCACGAGATGAGATATCCGGGTGGCGACTGCACCTCAGATATCTGGGTTTAG
Protein Sequence
- >AT3G23800.1
MEAAMNNHDGDCCKSGPGYATPLLAMSGPREKLIYVAAIYTGTGQAKPDYLATVDVEPSSSTYSSVIHRLPMPYLEDELHHSGWNSCSSCYGDSSCERRYLILPSLLSGRIYVIDTKTNPREPSLHKFVDPAEVLEKTGLAYPHQPHCLASGDVLVSCLGDEDGNAEGSGFLLLDSEFNIKGRWEKDGNSPLYGYDFWYQPRHKTMISTSWGAPAAFTKGFDLKDVSDGLYGKHLHVYSWPQGELKQILDLGDTGLLPLEVRFLHEPDKATGFAGCALSSTLVRFFKNDDETWSHEVAISVEPLKVENWILPEMPGLITDFLISLDDRFLYCSNWLHGDIRQYNIEDPKTPVLTGQIHVGGLVQKGSLVLALGEEGKAFQFDVPKIKGQRLRGGPQMFQLSLDGKRLYVTNSLFSVWDRQFYPELVEKGSHMLQIDVDTDKGGLSINPNFFVDFGTEPDGPSLAHEMRYPGGDCTSDIWV - >AT3G23800.2
MEAAMNNHDGDCCKSGPGYATPLLAMSGPREKLIYVAAIYTGTGQAKPDYLATVDVEPSSSTYSSVIHRLPMPYLEDELHHSGWNSCSSCYGDSSCERRYLILPSLLSGRIYVIDTKTNPREPSLHKFVDPAEVLEKTGLAYPHQPHCLASGDVLVSCLGDEDGNAEGSGFLLLDSEFNIKGRWEKDGNSPLYGYDFWYQPRHKTMISTSWGAPAAFTKGFDLKDVSDGLYGKHLHVYSWPQGELKQILDLGDTGLLPLEVRFLHEPDKATGFAGCALSSTLVRFFKNDDETWSHEVAISVEPLKVENWILPEMPGLITDFLISLDDRFLYCSNWLHGDIRQYNIEDPKTPVLTGQIHVGGLVQKGSLVLALGEEGKAFQFDVPKIKGQRLRGGPQMFQLSLDGKRLYVTNSLFSVWDRQFYPELVEKGSHMLQIDVDTDKGGLSINPNFFVDFGTEPDGPSLAHEMRYPGGDCTSDIWV