Information report for AT3G23790
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
Literature and News
- Arabidopsis contains nine long-chain acyl-coenzyme a synthetase genes that participate in fatty acid and glycerolipid metabolism. DOI: 10.1104/pp.003269 ; PMID: 12177484
- Syntenic relationships between Medicago truncatula and Arabidopsis reveal extensive divergence of genome organization. DOI: 10.1104/pp.102.016436 ; PMID: 12644654
- Arabidopsis contains a large superfamily of acyl-activating enzymes. Phylogenetic and biochemical analysis reveals a new class of acyl-coenzyme a synthetases. DOI: 10.1104/pp.103.020552 ; PMID: 12805634
- The age of the Arabidopsis thaliana genome duplication. DOI: 10.1023/a:1023001130337 ; PMID: 12777046
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Linking protein fractionation with multidimensional monolithic reversed-phase peptide chromatography/mass spectrometry enhances protein identification from complex mixtures even in the presence of abundant proteins. DOI: 10.1002/rcm.1376 ; PMID: 15052571
- Identification of a plastid acyl-acyl carrier protein synthetase in Arabidopsis and its role in the activation and elongation of exogenous fatty acids. DOI: 10.1111/j.1365-313X.2005.02553.x ; PMID: 16262711
- Cuticular lipid composition, surface structure, and gene expression in Arabidopsis stem epidermis. DOI: 10.1104/pp.105.070805 ; PMID: 16299169
- Identification, cloning and characterization of sis7 and sis10 sugar-insensitive mutants of Arabidopsis. DOI: 10.1186/1471-2229-8-104 ; PMID: 18854047
- GFP-tagging of Arabidopsis acyl-activating enzymes raises the issue of peroxisome-chloroplast import competition versus dual localization. DOI: 10.1016/j.jplph.2012.05.026 ; PMID: 22920973
- Brassica napus cDNAs encoding fatty acyl-CoA synthetase. DOI: 10.1023/a:1005780529307 ; PMID: 9106514
- Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis. DOI: 10.1021/pr034025j ; PMID: 12938931
Gene Resources
- UniProt: A0A178VKD9
- EMBL: LR881468, LUHQ01000003
- AlphaFoldDB: A0A178VKD9
- EnsemblPlants: AT3G23790.1
- Gramene: AT3G23790.1
- KEGG: ath:AT3G23790
- Orthologous matrix: MEAKRIY
- ExpressionAtlas: AT3G23790
- InterPro: IPR000873, IPR020459, IPR020845
- PANTHER: PTHR43813, PTHR43813:SF1
- SUPFAM: SSF56801
- PROSITE: PS00455
- Gene3D: 3.30.300.30, 3.40.50.12780
- SWISS-MODEL: A0A178VKD9
- Conserved Domain Database: cd17640
Homologs
- Brassica napus BnLACS9-C06
- Oryza sativa OsLACS9, Os4CL5, Os4CL1, Os4CL3, Os4CL2, OsACS, Os4CL4, OsBIABP1;SLAC1, OsACOS12, OsAAE3
- Solanum tuberosum Soltu.DM.08G021250
Sequences
cDNA Sequence
- >AT3G23790.1
TATTATCTCTGAGAGTCTGAAGAAGCCATGCTTCTGTAGCGGTGCCAACCAACTTGGAACTGATCTTTCCTGTGAAAAATCGTAATCATGACATCGACCTACTTTCTCGTCTCTTTCTTTCTACCTTTCTTTGCTTCTTCATCTTTCTCTCTTTCTCCTCTCATATATTCTCTCTATGCAAGCAACTTCATCACGATAACCTCTTATCTCCTCAGCCATGGCTTCAACGTCTCTCGGAGCTTCGATTCTCGTTTCTCACTGCTCCTCAGCTCCTGAATTTCAAGTTTCTGGGATGAGATTGGTGTTTGGTTACAAGGCTTTTGGCTGCAGAACTTCACGCAGGGGATTTCGAGTTCGCTGCGAATCCAAGATTCAGGAGAAGGAGTTAAGGCGGTGTTCGCCATTCTTAGAACGCTTATCATTGCCAAGGGAGGCTGCTTTGAGCTCTAATGAATGGAAGTCTGTTCCTGATATTTGGAGATCATCTGTGGAGAAGTACGGTGACAGAGTTGCGGTGGTAGATCCGTATCATGACCCGCCTTCTACATTCACGTACAGACAGTTGGAACAAGAAATCTTGGACTTTGTTGAGGGTTTACGAGTCGTTGGAGTGAAAGCAGACGAGAAGATTGCACTTTTTGCTGATAACTCCTGTCGATGGCTTGTTGCGGATCAAGGTATAATGGCCACAGGAGCAGTCAATGTTGTTAGAGGATCCAGATCGTCTGTGGAAGAGTTATTGCAGATATACTGTCATTCGGAAAGTGTAGCCCTTGTTGTGGATAACCCTGAGTTTTTCAATCGCATTGCGGAGTCATTTTCTTACAAGGCAGCTCCAAAATTTGTGATTCTTCTCTGGGGGGAAAAATCGTCGTTGGTTACAGCGGGTAGGCACACACCAGTCTATAGTTACAACGAAATTAAAAAGTTTGGACAAGAGAGACGTGCAAAATTTGCAAGATCTAATGATTCTGGGAAGTATGAATATGAATACATCGATCCAGATGATATAGCCACAATTATGTATACCAGTGGAACCACAGGAAATCCAAAAGGTGTTATGCTCACACATCAGAATTTGTTACACCAGATAAGAAACTTGTCCGATTTTGTGCCTGCGGAAGCTGGGGAAAGATTTCTGAGTATGTTGCCATCATGGCATGCTTATGAACGGGCTTGTGAATACTTCATATTTACATGTGGAGTTGAGCAAAAGTATACGTCTATAAGATTCTTAAAGGATGATCTCAAGCGTTATCAACCACACTATCTTATTTCAGTTCCTTTAGTATATGAGACACTCTACAGCGGGATTCAAAAGCAAATTTCTGCAAGCTCCCCTGCTCGTAAATTTTTGGCACTTACATTGATCAAAGTCAGCCTGGCATATACGGAAATGAAAAGAGTTTATGAGGGTCTTTGTTTGACAAAAAATCAAAAGCCTCCAATGTATATTGTTTCGTTGGTGGATTGGTTGTGGGCGAGAGTAGTTGCATTTTTCCTATGGCCATTGCATATGTTGGCTGAAAAGCTTGTACACAGAAAAATTCGTTCGTCTATTGGGATAACAAAGGCTGGTGTTAGTGGAGGTGGTAGTTTACCTATGCATGTTGACAAGTTTTTTGAGGCCATCGGTGTGAATGTACAAAATGGGTATGGTTTGACAGAAACCTCACCGGTTGTCTCTGCGCGGAGGCTTAGGTGTAACGTTCTTGGCTCAGTTGGGCATCCTATTAAAGATACAGAGTTCAAAATTGTAGATCATGAGACTGGTACTGTTCTTCCACCTGGTTCAAAGGGCATTGTCAAAGTCAGAGGCCCACCGGTGATGAAAGGTTACTACAAGAATCCACTGGCCACCAAGCAGGTTATAGATGACGATGGATGGTTCAATACTGGAGATATGGGTTGGATTACTCCTCAGCACTCAACAGGACGGAGTCGTAGCTGTGGAGGTGTCATCGTTCTTGAAGGGCGTGCCAAGGACACTATCGTGCTTTCCACAGGTGAAAATGTGGAACCATTGGAGATTGAAGAAGCGGCCATGAGAAGCAATTTGATTCAACAAATAGTGGTTATTGGACAGGATCAACGCCGCCTTGGAGCTATTGTTATCCCAAACAAAGAAGCAGCAGAAGGAGCAGCAAAGCAGAAAATTTCACCTGTAGATTCTGAAGTCAATGAACTTAGCAAGGAGACGATAACAAGCATGGTCTATGAAGAACTAAGGAAATGGACGTCACAATGCTCGTTCCAAGTTGGACCAGTTCTGATCGTGGATGAACCATTCACGATAGACAACGGTTTAATGACACCGACAATGAAAATAAGACGGGACAAGGTGGTTGATCAATACAAGAATGAAATAGAAAGACTCTACAAGTAGACTAGAAATTTTAGCATCCTCTTTATTTTACAATTATCTTGTTAAGGATTAGCAAATGTGAACCAGTTCTTACTCCATTGTTAATATAAGCTGCATATATCTTTGTTCATCAACTAGGGATTTCCAAGTTCTGCAGCACTATGGATACTTATTGAGTCTAATAGAATCAATAATTGGAAGAAGCAGTTAAACCGGTCAAAAGACCTAAGTATGTTGGAGGGTTTGAGATATCTTGACATTCTGTGTTTAGAGGAAGGCTAGATGTTGATACAATATTGTATAATTTGCATAATTATATTATCCGTTCAATCCAAAAGCATTTAAGTGCGA
CDS Sequence
- >AT3G23790.1
ATGGCTTCAACGTCTCTCGGAGCTTCGATTCTCGTTTCTCACTGCTCCTCAGCTCCTGAATTTCAAGTTTCTGGGATGAGATTGGTGTTTGGTTACAAGGCTTTTGGCTGCAGAACTTCACGCAGGGGATTTCGAGTTCGCTGCGAATCCAAGATTCAGGAGAAGGAGTTAAGGCGGTGTTCGCCATTCTTAGAACGCTTATCATTGCCAAGGGAGGCTGCTTTGAGCTCTAATGAATGGAAGTCTGTTCCTGATATTTGGAGATCATCTGTGGAGAAGTACGGTGACAGAGTTGCGGTGGTAGATCCGTATCATGACCCGCCTTCTACATTCACGTACAGACAGTTGGAACAAGAAATCTTGGACTTTGTTGAGGGTTTACGAGTCGTTGGAGTGAAAGCAGACGAGAAGATTGCACTTTTTGCTGATAACTCCTGTCGATGGCTTGTTGCGGATCAAGGTATAATGGCCACAGGAGCAGTCAATGTTGTTAGAGGATCCAGATCGTCTGTGGAAGAGTTATTGCAGATATACTGTCATTCGGAAAGTGTAGCCCTTGTTGTGGATAACCCTGAGTTTTTCAATCGCATTGCGGAGTCATTTTCTTACAAGGCAGCTCCAAAATTTGTGATTCTTCTCTGGGGGGAAAAATCGTCGTTGGTTACAGCGGGTAGGCACACACCAGTCTATAGTTACAACGAAATTAAAAAGTTTGGACAAGAGAGACGTGCAAAATTTGCAAGATCTAATGATTCTGGGAAGTATGAATATGAATACATCGATCCAGATGATATAGCCACAATTATGTATACCAGTGGAACCACAGGAAATCCAAAAGGTGTTATGCTCACACATCAGAATTTGTTACACCAGATAAGAAACTTGTCCGATTTTGTGCCTGCGGAAGCTGGGGAAAGATTTCTGAGTATGTTGCCATCATGGCATGCTTATGAACGGGCTTGTGAATACTTCATATTTACATGTGGAGTTGAGCAAAAGTATACGTCTATAAGATTCTTAAAGGATGATCTCAAGCGTTATCAACCACACTATCTTATTTCAGTTCCTTTAGTATATGAGACACTCTACAGCGGGATTCAAAAGCAAATTTCTGCAAGCTCCCCTGCTCGTAAATTTTTGGCACTTACATTGATCAAAGTCAGCCTGGCATATACGGAAATGAAAAGAGTTTATGAGGGTCTTTGTTTGACAAAAAATCAAAAGCCTCCAATGTATATTGTTTCGTTGGTGGATTGGTTGTGGGCGAGAGTAGTTGCATTTTTCCTATGGCCATTGCATATGTTGGCTGAAAAGCTTGTACACAGAAAAATTCGTTCGTCTATTGGGATAACAAAGGCTGGTGTTAGTGGAGGTGGTAGTTTACCTATGCATGTTGACAAGTTTTTTGAGGCCATCGGTGTGAATGTACAAAATGGGTATGGTTTGACAGAAACCTCACCGGTTGTCTCTGCGCGGAGGCTTAGGTGTAACGTTCTTGGCTCAGTTGGGCATCCTATTAAAGATACAGAGTTCAAAATTGTAGATCATGAGACTGGTACTGTTCTTCCACCTGGTTCAAAGGGCATTGTCAAAGTCAGAGGCCCACCGGTGATGAAAGGTTACTACAAGAATCCACTGGCCACCAAGCAGGTTATAGATGACGATGGATGGTTCAATACTGGAGATATGGGTTGGATTACTCCTCAGCACTCAACAGGACGGAGTCGTAGCTGTGGAGGTGTCATCGTTCTTGAAGGGCGTGCCAAGGACACTATCGTGCTTTCCACAGGTGAAAATGTGGAACCATTGGAGATTGAAGAAGCGGCCATGAGAAGCAATTTGATTCAACAAATAGTGGTTATTGGACAGGATCAACGCCGCCTTGGAGCTATTGTTATCCCAAACAAAGAAGCAGCAGAAGGAGCAGCAAAGCAGAAAATTTCACCTGTAGATTCTGAAGTCAATGAACTTAGCAAGGAGACGATAACAAGCATGGTCTATGAAGAACTAAGGAAATGGACGTCACAATGCTCGTTCCAAGTTGGACCAGTTCTGATCGTGGATGAACCATTCACGATAGACAACGGTTTAATGACACCGACAATGAAAATAAGACGGGACAAGGTGGTTGATCAATACAAGAATGAAATAGAAAGACTCTACAAGTAG
Protein Sequence
- >AT3G23790.1
MASTSLGASILVSHCSSAPEFQVSGMRLVFGYKAFGCRTSRRGFRVRCESKIQEKELRRCSPFLERLSLPREAALSSNEWKSVPDIWRSSVEKYGDRVAVVDPYHDPPSTFTYRQLEQEILDFVEGLRVVGVKADEKIALFADNSCRWLVADQGIMATGAVNVVRGSRSSVEELLQIYCHSESVALVVDNPEFFNRIAESFSYKAAPKFVILLWGEKSSLVTAGRHTPVYSYNEIKKFGQERRAKFARSNDSGKYEYEYIDPDDIATIMYTSGTTGNPKGVMLTHQNLLHQIRNLSDFVPAEAGERFLSMLPSWHAYERACEYFIFTCGVEQKYTSIRFLKDDLKRYQPHYLISVPLVYETLYSGIQKQISASSPARKFLALTLIKVSLAYTEMKRVYEGLCLTKNQKPPMYIVSLVDWLWARVVAFFLWPLHMLAEKLVHRKIRSSIGITKAGVSGGGSLPMHVDKFFEAIGVNVQNGYGLTETSPVVSARRLRCNVLGSVGHPIKDTEFKIVDHETGTVLPPGSKGIVKVRGPPVMKGYYKNPLATKQVIDDDGWFNTGDMGWITPQHSTGRSRSCGGVIVLEGRAKDTIVLSTGENVEPLEIEEAAMRSNLIQQIVVIGQDQRRLGAIVIPNKEAAEGAAKQKISPVDSEVNELSKETITSMVYEELRKWTSQCSFQVGPVLIVDEPFTIDNGLMTPTMKIRRDKVVDQYKNEIERLYK