Gene Details:
- Gene ID: AT3G23560
- Gene Symbol: ALF5
- Gene Name: ABERRANT LATERAL ROOT FORMATION 5
- Description: MATE efflux family protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0006036 — root epidermis — epidermis de la raíz (Spanish, exact), 根表皮 (Japanese, exact), epiblem (related), rhizodermis (related)
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Function-related keywords:
- root epidermis , shoot axis apex , leaf lamina base , root , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , hypocotyl , collective leaf structure , pollen
Literature:
- The Arabidopsis MATE transporter TT12 acts as a vacuolar flavonoid/H+ -antiporter active in proanthocyanidin-accumulating cells of the seed coat. DOI: 10.1105/tpc.106.046029 ; PMID: 17601828
Sequences:
cDNA Sequence
- >AT3G23560.1
GTGTTGGTATTTAATATCCTGTTTCTGCGTACATCTCTTATTTAATTCCTCACCTTGCCAAATCACAATTCTCCTCTTCAAGTCTTAACCAAACCCAAAGTCCTTCAACAAGAAAATCCAATGGCTGATCCGGCAACGAGTTCTCCGTTGTTGGATGACCATGTAGGTGGAGAAGATGAAAGAGGAAGGAGATCAAGATCATCAACTTTGGTTCAAAAAGTGATCGACGTGGAAGAAGCAAAAGCTCAAATGATTTACTCTTTGCCAATGATACTCACCAATGTTTTCTACTACTGTATTCCTATAACTTCTGTGATGTTTGCTTCTCACCTCGGTCAACTCGAGCTCGCCGGTGCCACCCTTGCCAATTCTTGGGCCACCGTCTCCGGTTTTGCCTTCATGGTAGGGTTAAGTGGATCACTTGAGACATTATGTGGACAAGGCTTTGGTGCAAAAAGATACAGGATGTTGGGAGTTCATCTACAATCATCTTGCATCGTTTCATTAGTTTTCAGCATCCTCATCACCATCTTCTGGTTCTTCACAGAATCGATTTTTGGACTTCTCAGACAAGATCCTAGCATTTCAAAACAAGCTGCACTCTATATGAAGTACCAAGCTCCCGGTTTACTAGCTTACGGGTTTTTACAAAATATTTTGAGATTTTGCCAAACACAATCGATCATTGCTCCACTAGTCATCTTCTCGTTTGTTCCCTTGGTGATAAACATTGCTACCGCATATGTTCTTGTTTATGTAGCTGGGCTTGGATTCATTGGTGCTCCAATAGCTACATCTATTTCATTGTGGATAGCTTTCCTTTCGCTTGGAACTTATGTGATGTGTTCAGAAAAGTTTAAGGAAACATGGACTGGATTTTCGTTGGAATCATTCCGTTATATCGTAATAAACTTGACATTAAGCCTCCCTTCTGCTGCTATGGTATGTTTGGAATATTGGGCATTCGAGATTCTTGTGTTCTTGGCAGGAGTGATGCCAAACCCGGAAATCAATACTTCTTTGGTCGCTATATGCGTCAACACGGAGGCGATTAGCTACATGTTAACATACGGACTTAGTGCAGCTGCAAGTACGCGTGTGTCCAATGAACTTGGAGCAGGAAATGTAAAAGGCGCAAAGAAGGCGACCTCTGTGTCCGTAAAGTTGTCTTTAGTTCTTGCTCTCGGCGTTGTAATTGTTTTACTCGTAGGTCATGATGGTTGGGTTGGGTTATTTAGCGATAGCTATGTGATTAAAGAGGAGTTTGCATCATTGAGGTTTTTTCTTGCTGCCTCTATAACTCTTGATTCAATCCAAGGAGTTTTATCAGGAGTTGCAAGAGGATGCGGATGGCAGCGTTTAGTCACGGTTATAAATTTGGCGACATTCTACTTAATTGGAATGCCGATTGCCGCCTTTTGTGGTTTCAAGTTGAAGTTTTATGCCAAGGGTTTGTGGATTGGTTTGATATGTGGAATATTTTGCCAATCATCATCTCTTTTGCTTATGACAATATTCCGGAAGTGGACAAAGCTGAATGTTGCTACGGTCTGAAAACTCTAGTTACGTTCCATTTTTCTACGGAGGCACATTTATTTTCTTAAGCAGATATGGAATCAGTTATCAAGATATATATTTGGAACTCATGATCATTTTCCAAACGCTTAGTTAAGATTTATCTTTCTTAGTTTTCTTTTTATTCTTTTGGAGTGTAAGGGAAATAATCTGGTTCACAAAGTTGGTCATGGCTTGAATATTACAGCATCATTCTAAGCTATCTTTGAAACCAACTTCTTCTTAGTTGCGTTCTTCAATTTACTAGACTAGTTTCGTTATCGTCAGCAAGAAACTTTTCTCATTTTCTATTTCTTTAATTCCTCGTCGTTTTACTATTTTTGGCGATTTTTTTGGCATATTGTGCTAAAATCAGAAATTTTGATGCTTTCTATGTAAACTTATTTCTCTTGCTTAGTTACACACGTCTGGTCTGGTGTCTCCATATTATCCTGTTT - >AT3G23560.2
GTGTTGGTATTTAATATCCTGTTTCTGCGTACATCTCTTATTTAATTCCTCACCTTGCCAAATCACAATTCTCCTCTTCAAGTCTTAACCAAACCCAAAGTCCTTCAACAAGAAAATCCAATGGCTGATCCGGCAACGAGTTCTCCGTTGTTGGATGACCATGTAGGTGGAGAAGATGAAAGAGGAAGGAGATCAAGATCATCAACTTTGGTTCAAAAAGTGATCGACGTGGAAGAAGCAAAAGCTCAAATGATTTACTCTTTGCCAATGATACTCACCAATGTTTTCTACTACTGTATTCCTATAACTTCTGTGATGTTTGCTTCTCACCTCGGTCAACTCGAGCTCGCCGGTGCCACCCTTGCCAATTCTTGGGCCACCGTCTCCGGTTTTGCCTTCATGGTAGGGTTAAGTGGATCACTTGAGACATTATGTGGACAAGGCTTTGGTGCAAAAAGATACAGGATGTTGGGAGTTCATCTACAATCATCTTGCATCGTTTCATTAGTTTTCAGCATCCTCATCACCATCTTCTGGTTCTTCACAGAATCGATTTTTGGACTTCTCAGACAAGATCCTAGCATTTCAAAACAAGCTGCACTCTATATGAAGTACCAAGCTCCCGGTTTACTAGCTTACGGGTTTTTACAAAATATTTTGAGATTTTGCCAAACACAATCGATCATTGCTCCACTAGTCATCTTCTCGTTTGTTCCCTTGGTGATAAACATTGCTACCGCATATGTTCTTGTTTATGTAGCTGGGCTTGGATTCATTGGTGCTCCAATAGCTACATCTATTTCATTGTGGATAGCTTTCCTTTCGCTTGGAACTTATGTGATGTGTTCAGAAAAGTTTAAGGAAACATGGACTGGATTTTCGTTGGAATCATTCCGTTATATCGTAATAAACTTGACATTAAGCCTCCCTTCTGCTGCTATGGTATGTTTGGAATATTGGGCATTCGAGATTCTTGTGTTCTTGGCAGGAGTGATGCCAAACCCGGAAATCAATACTTCTTTGGTCGCTATATGCGTCAACACGGAGGCGATTAGCTACATGTTAACATACGGACTTAGTGCAGCTGCAAGTACGCGTGTGTCCAATGAACTTGGAGCAGGAAATGTAAAAGGCGCAAAGAAGGCGACCTCTGTGTCCGTAAAGTTGTCTTTAGTTCTTGCTCTCGGCGTTGTAATTGTTTTACTCGTAGGTCATGATGGTTGGGTTGGGTTATTTAGCGATAGCTATGTGATTAAAGAGGAGTTTGCATCATTGAGGTTTTTTCTTGCTGCCTCTATAACTCTTGATTCAATCCAAGGAGTTTTATCAGGAGTTGCAAGAGGATGCGGATGGCAGCGTTTAGTCACGGTTATAAATTTGGCGACATTCTACTTAATTGGAATGCCGATTGCCGCCTTTTGTGGTTTCAAGTTGAAGTTTTATGCCAAGGGTTTGTGGATTGGTTTGATATGTGGAATATTTTGCCAATCATCATCTCTTTTGCTTATGACAATATTCCGGAAGTGGACAAAGCTGAATGTTGCTACGGTCTGAAAACTCTAGTTACGTTCCATTTTTCTACGGAGGCACATTTATTTTCTTAAGCAGATATGGAATCAGTTATCAAGATATATATTTGGAACTCATGATCATTTTCCAAACGCTTAGTTAAGATTTATCTTTCTTAGTTTTCTTTTTATTCTTTTGGAGTGTAAGGGAAATAATCTGGTTCACAAAGTTGGTCATGGCTTGAATATTACAGCATCATTCTAAGCTATCTTTGAAACCAACTTCTTCTTAGTTGCGTTCTTCAATTTACTAGACTAGTTTCGTTATCGTCAGCAAGAAACTTTTCTCATTTTCTATTTCTTTAATTCCTCGTCGTTTTACTATTTTTGGCGATTTTTTTGGCATATTGTGCTAAAATCAGAAATTTTGATGCTTTCTATGTAAACTTATTTCTCTTGCTTAGTTACACACGTCTGGTCTGGTGTCTCCATATTATCCTGTTT
CDS Sequence
- >AT3G23560.1
ATGGCTGATCCGGCAACGAGTTCTCCGTTGTTGGATGACCATGTAGGTGGAGAAGATGAAAGAGGAAGGAGATCAAGATCATCAACTTTGGTTCAAAAAGTGATCGACGTGGAAGAAGCAAAAGCTCAAATGATTTACTCTTTGCCAATGATACTCACCAATGTTTTCTACTACTGTATTCCTATAACTTCTGTGATGTTTGCTTCTCACCTCGGTCAACTCGAGCTCGCCGGTGCCACCCTTGCCAATTCTTGGGCCACCGTCTCCGGTTTTGCCTTCATGGTAGGGTTAAGTGGATCACTTGAGACATTATGTGGACAAGGCTTTGGTGCAAAAAGATACAGGATGTTGGGAGTTCATCTACAATCATCTTGCATCGTTTCATTAGTTTTCAGCATCCTCATCACCATCTTCTGGTTCTTCACAGAATCGATTTTTGGACTTCTCAGACAAGATCCTAGCATTTCAAAACAAGCTGCACTCTATATGAAGTACCAAGCTCCCGGTTTACTAGCTTACGGGTTTTTACAAAATATTTTGAGATTTTGCCAAACACAATCGATCATTGCTCCACTAGTCATCTTCTCGTTTGTTCCCTTGGTGATAAACATTGCTACCGCATATGTTCTTGTTTATGTAGCTGGGCTTGGATTCATTGGTGCTCCAATAGCTACATCTATTTCATTGTGGATAGCTTTCCTTTCGCTTGGAACTTATGTGATGTGTTCAGAAAAGTTTAAGGAAACATGGACTGGATTTTCGTTGGAATCATTCCGTTATATCGTAATAAACTTGACATTAAGCCTCCCTTCTGCTGCTATGGTATGTTTGGAATATTGGGCATTCGAGATTCTTGTGTTCTTGGCAGGAGTGATGCCAAACCCGGAAATCAATACTTCTTTGGTCGCTATATGCGTCAACACGGAGGCGATTAGCTACATGTTAACATACGGACTTAGTGCAGCTGCAAGTACGCGTGTGTCCAATGAACTTGGAGCAGGAAATGTAAAAGGCGCAAAGAAGGCGACCTCTGTGTCCGTAAAGTTGTCTTTAGTTCTTGCTCTCGGCGTTGTAATTGTTTTACTCGTAGGTCATGATGGTTGGGTTGGGTTATTTAGCGATAGCTATGTGATTAAAGAGGAGTTTGCATCATTGAGGTTTTTTCTTGCTGCCTCTATAACTCTTGATTCAATCCAAGGAGTTTTATCAGGAGTTGCAAGAGGATGCGGATGGCAGCGTTTAGTCACGGTTATAAATTTGGCGACATTCTACTTAATTGGAATGCCGATTGCCGCCTTTTGTGGTTTCAAGTTGAAGTTTTATGCCAAGGGTTTGTGGATTGGTTTGATATGTGGAATATTTTGCCAATCATCATCTCTTTTGCTTATGACAATATTCCGGAAGTGGACAAAGCTGAATGTTGCTACGGTCTGA - >AT3G23560.2
ATGGCTGATCCGGCAACGAGTTCTCCGTTGTTGGATGACCATGTAGGTGGAGAAGATGAAAGAGGAAGGAGATCAAGATCATCAACTTTGGTTCAAAAAGTGATCGACGTGGAAGAAGCAAAAGCTCAAATGATTTACTCTTTGCCAATGATACTCACCAATGTTTTCTACTACTGTATTCCTATAACTTCTGTGATGTTTGCTTCTCACCTCGGTCAACTCGAGCTCGCCGGTGCCACCCTTGCCAATTCTTGGGCCACCGTCTCCGGTTTTGCCTTCATGGTAGGGTTAAGTGGATCACTTGAGACATTATGTGGACAAGGCTTTGGTGCAAAAAGATACAGGATGTTGGGAGTTCATCTACAATCATCTTGCATCGTTTCATTAGTTTTCAGCATCCTCATCACCATCTTCTGGTTCTTCACAGAATCGATTTTTGGACTTCTCAGACAAGATCCTAGCATTTCAAAACAAGCTGCACTCTATATGAAGTACCAAGCTCCCGGTTTACTAGCTTACGGGTTTTTACAAAATATTTTGAGATTTTGCCAAACACAATCGATCATTGCTCCACTAGTCATCTTCTCGTTTGTTCCCTTGGTGATAAACATTGCTACCGCATATGTTCTTGTTTATGTAGCTGGGCTTGGATTCATTGGTGCTCCAATAGCTACATCTATTTCATTGTGGATAGCTTTCCTTTCGCTTGGAACTTATGTGATGTGTTCAGAAAAGTTTAAGGAAACATGGACTGGATTTTCGTTGGAATCATTCCGTTATATCGTAATAAACTTGACATTAAGCCTCCCTTCTGCTGCTATGGTATGTTTGGAATATTGGGCATTCGAGATTCTTGTGTTCTTGGCAGGAGTGATGCCAAACCCGGAAATCAATACTTCTTTGGTCGCTATATGCGTCAACACGGAGGCGATTAGCTACATGTTAACATACGGACTTAGTGCAGCTGCAAGTACGCGTGTGTCCAATGAACTTGGAGCAGGAAATGTAAAAGGCGCAAAGAAGGCGACCTCTGTGTCCGTAAAGTTGTCTTTAGTTCTTGCTCTCGGCGTTGTAATTGTTTTACTCGTAGGTCATGATGGTTGGGTTGGGTTATTTAGCGATAGCTATGTGATTAAAGAGGAGTTTGCATCATTGAGGTTTTTTCTTGCTGCCTCTATAACTCTTGATTCAATCCAAGGAGTTTTATCAGGAGTTGCAAGAGGATGCGGATGGCAGCGTTTAGTCACGGTTATAAATTTGGCGACATTCTACTTAATTGGAATGCCGATTGCCGCCTTTTGTGGTTTCAAGTTGAAGTTTTATGCCAAGGGTTTGTGGATTGGTTTGATATGTGGAATATTTTGCCAATCATCATCTCTTTTGCTTATGACAATATTCCGGAAGTGGACAAAGCTGAATGTTGCTACGGTCTGA
Protein Sequence
- >AT3G23560.1
MADPATSSPLLDDHVGGEDERGRRSRSSTLVQKVIDVEEAKAQMIYSLPMILTNVFYYCIPITSVMFASHLGQLELAGATLANSWATVSGFAFMVGLSGSLETLCGQGFGAKRYRMLGVHLQSSCIVSLVFSILITIFWFFTESIFGLLRQDPSISKQAALYMKYQAPGLLAYGFLQNILRFCQTQSIIAPLVIFSFVPLVINIATAYVLVYVAGLGFIGAPIATSISLWIAFLSLGTYVMCSEKFKETWTGFSLESFRYIVINLTLSLPSAAMVCLEYWAFEILVFLAGVMPNPEINTSLVAICVNTEAISYMLTYGLSAAASTRVSNELGAGNVKGAKKATSVSVKLSLVLALGVVIVLLVGHDGWVGLFSDSYVIKEEFASLRFFLAASITLDSIQGVLSGVARGCGWQRLVTVINLATFYLIGMPIAAFCGFKLKFYAKGLWIGLICGIFCQSSSLLLMTIFRKWTKLNVATV - >AT3G23560.2
MADPATSSPLLDDHVGGEDERGRRSRSSTLVQKVIDVEEAKAQMIYSLPMILTNVFYYCIPITSVMFASHLGQLELAGATLANSWATVSGFAFMVGLSGSLETLCGQGFGAKRYRMLGVHLQSSCIVSLVFSILITIFWFFTESIFGLLRQDPSISKQAALYMKYQAPGLLAYGFLQNILRFCQTQSIIAPLVIFSFVPLVINIATAYVLVYVAGLGFIGAPIATSISLWIAFLSLGTYVMCSEKFKETWTGFSLESFRYIVINLTLSLPSAAMVCLEYWAFEILVFLAGVMPNPEINTSLVAICVNTEAISYMLTYGLSAAASTRVSNELGAGNVKGAKKATSVSVKLSLVLALGVVIVLLVGHDGWVGLFSDSYVIKEEFASLRFFLAASITLDSIQGVLSGVARGCGWQRLVTVINLATFYLIGMPIAAFCGFKLKFYAKGLWIGLICGIFCQSSSLLLMTIFRKWTKLNVATV