Information report for AT3G23490
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
Literature and News
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Molecular phenotyping of the pal1 and pal2 mutants of Arabidopsis thaliana reveals far-reaching consequences on phenylpropanoid, amino acid, and carbohydrate metabolism. DOI: 10.1105/tpc.104.023705 ; PMID: 15377757
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: A0A178VD28
- EMBL: CACRSJ010000106, CACSHJ010000089, LR881468
- AlphaFoldDB: A0A178VD28
- EnsemblPlants: AT3G23490.1, AT3G23490.2
- Gramene: AT3G23490.1, AT3G23490.2
- KEGG: ath:AT3G23490
- Orthologous matrix: YELVMIN
- ExpressionAtlas: AT3G23490
- InterPro: IPR003712, IPR008076, IPR010982
- PANTHER: PTHR34186, PTHR34186:SF2
- SUPFAM: SSF47413, SSF55234
- Gene3D: 1.10.260.40, 3.30.1160.10
- OrthoDB: A0A178VD28
- SWISS-MODEL: A0A178VD28
- Conserved Domain Database: cd00559
Homologs
- Oryza sativa OsCYN
Sequences
cDNA Sequence
- >AT3G23490.1
GTCTGTCTGAGTGGATTCGTATACTATATTGTGATGAGAGTCACCACAACAAATTCGTTGACATGAGCCTTTCATATATTTTTGAATTATACTGAACTAAAACCCATTTAAAAGCCCATTTAAAGACCCATTATAAGAGTAGAGATACTCAGCCCATTTAAAGATAAAATTACGTCATAGCGATTTTTCCATTAAAAGAGTGAGGAAGAGACAAAAGTGATTGATTGGTCAGAAAAAATGGAAGCGGCGAAGAAACAGAGTGTTACAAATCAGCTTCTCGCCGTGAAATCAGCTTCCGGCAAGACTTTTAGCCAGTTAGCCGCGGAGACAGGTCTAACCAACGTATACGTAGCTCAGCTTCTCCGTCGTCAAGCTCAGCTCAAACCGGACACAGTCCCAAAGCTTAAGGAAGCTTTACCAGCTCTGACCGATGAACTAATCGGAGATATGATGTCTCCTCCGTGGAGATCCTATGATCCTAATCTCATCCAAGAACCCACTATCTACAGGTTGAATGAAGCAGTGATGCATTTTGGTGAGAGTATAAAGGAGATTATCAATGAAGATTTTGGAGATGGCATCATGTCGGCGATAGATTTCTATTGCTCTGTCGACAAAATCAAAGGAGTGGATGGTAACAATCGCGTGGTTGTGACGCTTGATGGAAAGTATCTTTCGCATTCCGAACAGAGGACGGAGAATATGGTCTCAAGGCTAAATCTCAAGGGAGGTACAAGCGAATGATAAGAAAGCCTTTACGTATCCATGAAGGCCTTATTGTAAGTGGTAACGTTGTAATACCTATGTGTTTGTTTATCTGTAATATATGCAACTTCAGCATCTAGATTAAAAGCTGTTTCAGGTTGAATAACAGTGAATAAACAAAACTTATAAAACCTTTCTATGTTTATCTTTAACATCGTAATCGAGTTCCGATTCATGCTTAATATCGATTGAATAAAGTTTCAGGCACTGCTATGTACCCGAGATGTAATACTGTCGCAGAGATCTTGAGTTACATCATAGTACTTGATCTTGAACAATAGCCATTGCACAATAACAGCTTGAGTAAAGGTTCACAAACATTTCAGATATATGGTCTGGACAGTGAAAGATTGTTGGAACAGAATGCATAATCATGAAAGCAGAACTGTTTCAAGTGTCTAGGTAGTCTCTTGCAAATTATGAAACTTAACGGGAAACACACAGAAAAAACAACGTTAGACGAAACATTTCCAGTCTGAAGTATTAGTCCCATTTCTTGAGTTAAAGCGGAGCTGTGGAATGGATCATCATTACCGAATGCAGCTACGTTCCCTGGACGTGAGAAAAC - >AT3G23490.2
GTCTGTCTGAGTGGATTCGTATACTATATTGTGATGAGAGTCACCACAACAAATTCGTTGACATGAGCCTTTCATATATTTTTGAATTATACTGAACTAAAACCCATTTAAAAGCCCATTTAAAGACCCATTATAAGAGTAGAGATACTCAGCCCATTTAAAGATAAAATTACGTCATAGCGATTTTTCCATTAAAAGAGTGAGGAAGAGACAAAAGTGATTGATTGGTCAGAAAAAATGGAAGCGGCGAAGAAACAGAGTGTTACAAATCAGCTTCTCGCCGTGAAATCAGCTTCCGGCAAGACTTTTAGCCAGTTAGCCGCGGAGACAGGTCTAACCAACGTATACGTAGCTCAGCTTCTCCGTCGTCAAGCTCAGCTCAAACCGGACACAGTCCCAAAGCTTAAGGAAGCTTTACCAGCTCTGACCGATGAACTAATCGGAGATATGATGTCTCCTCCGTGGAGATCCTATGATCCTAATCTCATCCAAGAACCCACTATCTACAGGTTGAATGAAGCAGTGATGCATTTTGGTGAGAGTATAAAGGAGATTATCAATGAAGATTTTGGAGATGGCATCATGTCGGCGATAGATTTCTATTGCTCTGTCGACAAAATCAAAGGAGTGGATGGTAACAATCGCGTGGTTGTGACGCTTGATGGAAAGTATCTTTCGCATTCCGAACAGAGGACGGAGAATATGGTCTCAAGGCTAAATCTCAAGGGAGGTACAAGCGAATGATAAGAAAGCCTTTACGTATCCATGAAGGCCTTATTGTAAGTGGTAACGTTGTAATACCTATGTGTTTGTTTATCTGTAATATATGCAACTTCAGCATCTAGATTAAAAGCTGTTTCAGGTTGAATAACAGTGAATAAACAAAACTTATAAAACCTTTCTATGTTTATCTTTAACATCGTAATCGAGTTCCGATTCATGCTTAATATCGATTGAATAAAGTTTCAGGCACTGCTATGTACCCGAGATGTAATACTGTCGCAGAGATCTTGAGTTACATCATAGTACTTGATCTTGAACAATAGCCATTGCACAATAACAGCTTGAGTAAAGGTTCACAAACATTTCAGATATATGGTCTGGACAGTGAAAGATTGTTGGAACAGAATGCATAATCATGAAAGCAGAACTGTTTCAAGTGTCTAGGTAGTCTCTTGCAAATTATGAAACTTAACGGGAAACACACAGAAAAAACAACGTTAGACGAAACATTTCCAGTCTGAAGTATTAGTCCCATTTCTTGAGTTAAAGCGGAGCTGTGGAATGGATCATCATTACCGAATGCAGCTACGTTCCCTGGACGTGAGAAAAC - >AT3G23490.3
GTCTGTCTGAGTGGATTCGTATACTATATTGTGATGAGAGTCACCACAACAAATTCGTTGACATGAGCCTTTCATATATTTTTGAATTATACTGAACTAAAACCCATTTAAAAGCCCATTTAAAGACCCATTATAAGAGTAGAGATACTCAGCCCATTTAAAGATAAAATTACGTCATAGCGATTTTTCCATTAAAAGAGTGAGGAAGAGACAAAAGTGATTGATTGGTCAGAAAAAATGGAAGCGGCGAAGAAACAGAGTGTTACAAATCAGCTTCTCGCCGTGAAATCAGCTTCCGGCAAGACTTTTAGCCAGTTAGCCGCGGAGACAGGTCTAACCAACGTATACGTAGCTCAGCTTCTCCGTCGTCAAGCTCAGCTCAAACCGGACACAGTCCCAAAGCTTAAGGAAGCTTTACCAGCTCTGACCGATGAACTAATCGGAGATATGATGTCTCCTCCGTGGAGATCCTATGATCCTAATCTCATCCAAGAACCCACTATCTACAGGTTGAATGAAGCAGTGATGCATTTTGGTGAGAGTATAAAGGAGATTATCAATGAAGATTTTGGAGATGGCATCATGTCGGCGATAGATTTCTATTGCTCTGTCGACAAAATCAAAGGAGTGGATGGTAACAATCGCGTGGTTGTGACGCTTGATGGAAAGTATCTTTCGCATTCCGAACAGAGGACGGAGAATATGGTCTCAAGGCTAAATCTCAAGGGAGGTACAAGCGAATGATAAGAAAGCCTTTACGTATCCATGAAGGCCTTATTGTAAGTGGTAACGTTGTAATACCTATGTGTTTGTTTATCTGTAATATATGCAACTTCAGCATCTAGATTAAAAGCTGTTTCAGGTTGAATAACAGTGAATAAACAAAACTTATAAAACCTTTCTATGTTTATCTTTAACATCGTAATCGAGTTCCGATTCATGCTTAATATCGATTGAATAAAGTTTCAGGCACTGCTATGTACCCGAGATGTAATACTGTCGCAGAGATCTTGAGTTACATCATAGTACTTGATCTTGAACAATAGCCATTGCACAATAACAGCTTGAGTAAAGGTTCACAAACATTTCAGATATATGGTCTGGACAGTGAAAGATTGTTGGAACAGAATGCATAATCATGAAAGCAGAACTGTTTCAAGTGTCTAGGTAGTCTCTTGCAAATTATGAAACTTAACGGGAAACACACAGAAAAAACAACGTTAGACGAAACATTTCCAGTCTGAAGTATTAGTCCCATTTCTTGAGTTAAAGCGGAGCTGTGGAATGGATCATCATTACCGAATGCAGCTACGTTCCCTGGACGTGAGAAAAC
CDS Sequence
- >AT3G23490.1
ATGGAAGCGGCGAAGAAACAGAGTGTTACAAATCAGCTTCTCGCCGTGAAATCAGCTTCCGGCAAGACTTTTAGCCAGTTAGCCGCGGAGACAGGTCTAACCAACGTATACGTAGCTCAGCTTCTCCGTCGTCAAGCTCAGCTCAAACCGGACACAGTCCCAAAGCTTAAGGAAGCTTTACCAGCTCTGACCGATGAACTAATCGGAGATATGATGTCTCCTCCGTGGAGATCCTATGATCCTAATCTCATCCAAGAACCCACTATCTACAGGTTGAATGAAGCAGTGATGCATTTTGGTGAGAGTATAAAGGAGATTATCAATGAAGATTTTGGAGATGGCATCATGTCGGCGATAGATTTCTATTGCTCTGTCGACAAAATCAAAGGAGTGGATGGTAACAATCGCGTGGTTGTGACGCTTGATGGAAAGTATCTTTCGCATTCCGAACAGAGGACGGAGAATATGGTCTCAAGGCTAAATCTCAAGGGAGGTACAAGCGAATGA - >AT3G23490.2
ATGGAAGCGGCGAAGAAACAGAGTGTTACAAATCAGCTTCTCGCCGTGAAATCAGCTTCCGGCAAGACTTTTAGCCAGTTAGCCGCGGAGACAGGTCTAACCAACGTATACGTAGCTCAGCTTCTCCGTCGTCAAGCTCAGCTCAAACCGGACACAGTCCCAAAGCTTAAGGAAGCTTTACCAGCTCTGACCGATGAACTAATCGGAGATATGATGTCTCCTCCGTGGAGATCCTATGATCCTAATCTCATCCAAGAACCCACTATCTACAGGTTGAATGAAGCAGTGATGCATTTTGGTGAGAGTATAAAGGAGATTATCAATGAAGATTTTGGAGATGGCATCATGTCGGCGATAGATTTCTATTGCTCTGTCGACAAAATCAAAGGAGTGGATGGTAACAATCGCGTGGTTGTGACGCTTGATGGAAAGTATCTTTCGCATTCCGAACAGAGGACGGAGAATATGGTCTCAAGGCTAAATCTCAAGGGAGGTACAAGCGAATGA - >AT3G23490.3
ATGGAAGCGGCGAAGAAACAGAGTGTTACAAATCAGCTTCTCGCCGTGAAATCAGCTTCCGGCAAGACTTTTAGCCAGTTAGCCGCGGAGACAGGTCTAACCAACGTATACGTAGCTCAGCTTCTCCGTCGTCAAGCTCAGCTCAAACCGGACACAGTCCCAAAGCTTAAGGAAGCTTTACCAGCTCTGACCGATGAACTAATCGGAGATATGATGTCTCCTCCGTGGAGATCCTATGATCCTAATCTCATCCAAGAACCCACTATCTACAGGTTGAATGAAGCAGTGATGCATTTTGGTGAGAGTATAAAGGAGATTATCAATGAAGATTTTGGAGATGGCATCATGTCGGCGATAGATTTCTATTGCTCTGTCGACAAAATCAAAGGAGTGGATGGTAACAATCGCGTGGTTGTGACGCTTGATGGAAAGTATCTTTCGCATTCCGAACAGAGGACGGAGAATATGGTCTCAAGGCTAAATCTCAAGGGAGGTACAAGCGAATGA
Protein Sequence
- >AT3G23490.1
MEAAKKQSVTNQLLAVKSASGKTFSQLAAETGLTNVYVAQLLRRQAQLKPDTVPKLKEALPALTDELIGDMMSPPWRSYDPNLIQEPTIYRLNEAVMHFGESIKEIINEDFGDGIMSAIDFYCSVDKIKGVDGNNRVVVTLDGKYLSHSEQRTENMVSRLNLKGGTSE - >AT3G23490.2
MEAAKKQSVTNQLLAVKSASGKTFSQLAAETGLTNVYVAQLLRRQAQLKPDTVPKLKEALPALTDELIGDMMSPPWRSYDPNLIQEPTIYRLNEAVMHFGESIKEIINEDFGDGIMSAIDFYCSVDKIKGVDGNNRVVVTLDGKYLSHSEQRTENMVSRLNLKGGTSE - >AT3G23490.3
MEAAKKQSVTNQLLAVKSASGKTFSQLAAETGLTNVYVAQLLRRQAQLKPDTVPKLKEALPALTDELIGDMMSPPWRSYDPNLIQEPTIYRLNEAVMHFGESIKEIINEDFGDGIMSAIDFYCSVDKIKGVDGNNRVVVTLDGKYLSHSEQRTENMVSRLNLKGGTSE