Information report for AT3G23290
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
Functional Keywords
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , petiole , hypocotyl , leaf apex , collective leaf structure
Literature and News
- Developmental events and shoot apical meristem gene expression patterns during shoot development in Arabidopsis thaliana. DOI: 10.1046/j.1365-313x.2002.01479.x ; PMID: 12492830
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Overexpression of LSH1, a member of an uncharacterised gene family, causes enhanced light regulation of seedling development. DOI: 10.1111/j.1365-313x.2003.01993.x ; PMID: 14871309
- CUP-SHAPED COTYLEDON1 transcription factor activates the expression of LSH4 and LSH3, two members of the ALOG gene family, in shoot organ boundary cells. DOI: 10.1111/j.1365-313X.2011.04571.x ; PMID: 21435050
Gene Resources
- UniProt: A0A178VHD2
- EMBL: LUHQ01000003
- AlphaFoldDB: A0A178VHD2
- EnsemblPlants: AT3G23290.2
- Gramene: AT3G23290.2
- KEGG: ath:AT3G23290
- Orthologous matrix: NNSMTML
- ExpressionAtlas: AT3G23290
- InterPro: IPR006936, IPR040222
- PANTHER: PTHR31165, PTHR31165:SF115
- PROSITE: PS51697
- SWISS-MODEL: A0A178VHD2
Homologs
- Citrus sinensis orange1.1g000354m.g
- Gossypium arboreum Cotton_A_24712_BGI-A2_v1.0
- Gossypium barbadense Gobar.D10G227800
- Gossypium hirsutum Gohir.D10G201750
Sequences
cDNA Sequence
- >AT3G23290.2
CAACAATAATGATTTTAAGAGATATACGTAACCTTAGTATTTAGCTTAGTGTTTAACTCAATCTCTATAGACTATAGTAAAAACAAGCTTGCATTATTATTTGTTCCACTGTTATTAGTCAAGCGAAAACATAAATGAAAAGCAAAAAAAGAATATTTATATGACTCCATTCAATTCACTCTTTTATAGCAATGACTACGATAGCCTCTCATCTTCTTTTTTCCTCTCCATCATCTTCTCTTATCAACTTTAGACTCACAAGCCTCCTCTCATCTTCACCATAACCGAAAAACCAAACAAAAAATCCTTAGATAATCAGATCTTGATATTATGGATCATATCATCGGCTTTATGGGCACAACAAACATGTCACATAACACAAACCTTATGATCGCTGCCGCAGCCACTACCACTACGACCTCTTCGTCTTCCTCTTCGTCCTCCGGAGGCTCGGGGACTAACCAGCTAAGCAGGTACGAGAATCAGAAGAGAAGAGATTGGAACACTTTCGGACAGTATCTACGCAATCACCGTCCACCACTTTCTCTCTCCCGTTGCAGTGGTGCTCATGTTCTTGAATTCCTCAGGTACCTCGACCAATTCGGCAAGACTAAGGTTCACACACACCTATGTCCGTTCTTCGGACACCCAAACCCACCAGCACCATGTGCCTGTCCACTCCGACAAGCGTGGGGTAGTCTGGACGCACTCATTGGCCGTCTTAGAGCTGCTTTTGAAGAGAACGGTGGTTCACCAGAGACGAACCCTTTTGGTGCACGAGCCGTTCGACTCTACCTAAGGGAAGTACGTGACTCGCAGGCTAAAGCACGTGGGATCAGCTATGAAAAAAAGAAGCGCAAGCGACCTCCTCCGCCACTACCACCGGCTCAGCCGGCGATTTCAAGTAGCCCTAATTAACATTAAGTCATGAGTAAGATGTTTCAATGAACTACGTTTGTTTACAAATTTTTATCAATGACGAACATGCACGAGTTCTTTTAAAGTCACATGCCCTTTCCTAAACTTTTATTTGGCAAACCTAAAGAATTCTTATGTTGTATTAAATAAATTTGTAGTTCTTTCTGTTTGGCCTCACATAAGTATAGATTAGTATATATTTTTAATATATACATGTAACATGTTAGACAAGTCATAAGTTTTATCTTATAGACTAGTAAAAGCACTAAACTAATGGCTTTGTTATTTATTTGCAAAATTGAAAGATGGCAAACTTATGATTATGTTGGTTCATTTATCGCATGTATTTATAAAACATTATATAATATTACGTTTTCTCTAAGTGATTCAAGAGTTTATATTTAATACATTCTTGAATCATTTATCCAATTATTTCAAAGAACCTCTATCTCTATATATTGATCAAGTTAAACAAGTACTAATGTTTTGTAGGATACTAAATTTAGGGTTTTTCTTTGCTATTTACGGATCCCAATGCAAGACCGAA
CDS Sequence
- >AT3G23290.2
ATGGATCATATCATCGGCTTTATGGGCACAACAAACATGTCACATAACACAAACCTTATGATCGCTGCCGCAGCCACTACCACTACGACCTCTTCGTCTTCCTCTTCGTCCTCCGGAGGCTCGGGGACTAACCAGCTAAGCAGGTACGAGAATCAGAAGAGAAGAGATTGGAACACTTTCGGACAGTATCTACGCAATCACCGTCCACCACTTTCTCTCTCCCGTTGCAGTGGTGCTCATGTTCTTGAATTCCTCAGGTACCTCGACCAATTCGGCAAGACTAAGGTTCACACACACCTATGTCCGTTCTTCGGACACCCAAACCCACCAGCACCATGTGCCTGTCCACTCCGACAAGCGTGGGGTAGTCTGGACGCACTCATTGGCCGTCTTAGAGCTGCTTTTGAAGAGAACGGTGGTTCACCAGAGACGAACCCTTTTGGTGCACGAGCCGTTCGACTCTACCTAAGGGAAGTACGTGACTCGCAGGCTAAAGCACGTGGGATCAGCTATGAAAAAAAGAAGCGCAAGCGACCTCCTCCGCCACTACCACCGGCTCAGCCGGCGATTTCAAGTAGCCCTAATTAA
Protein Sequence
- >AT3G23290.2
MDHIIGFMGTTNMSHNTNLMIAAAATTTTTSSSSSSSSGGSGTNQLSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTHLCPFFGHPNPPAPCACPLRQAWGSLDALIGRLRAAFEENGGSPETNPFGARAVRLYLREVRDSQAKARGISYEKKKRKRPPPPLPPAQPAISSSPN