Information report for AT3G23280
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
Functional Keywords
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , pollen tube cell , pollen
Literature and News
- Full-length messenger RNA sequences greatly improve genome annotation. DOI: 10.1186/gb-2002-3-6-research0029 ; PMID: 12093376
- Evaluation and classification of RING-finger domains encoded by the Arabidopsis genome. DOI: 10.1186/gb-2002-3-4-research0016 ; PMID: 11983057
- Unexpected protein families including cell defense components feature in the N-myristoylome of a higher eukaryote. DOI: 10.1074/jbc.M307321200 ; PMID: 12912986
- The ubiquitin ligase XBAT32 regulates lateral root development in Arabidopsis. DOI: 10.1111/j.1365-313X.2004.02266.x ; PMID: 15584963
- Functional analysis of the RING-type ubiquitin ligase family of Arabidopsis. DOI: 10.1104/pp.104.052423 ; PMID: 15644464
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- The RING-Type E3 Ligase XBAT35.2 Is Involved in Cell Death Induction and Pathogen Response. DOI: 10.1104/pp.17.01071 ; PMID: 28951488
- Arabidopsis RING-type E3 ubiquitin ligase XBAT35.2 promotes proteasome-dependent degradation of ACD11 to attenuate abiotic stress tolerance. DOI: 10.1111/tpj.15032 ; PMID: 33080095
- The E3 ligase XBAT35 mediates thermoresponsive hypocotyl growth by targeting ELF3 for degradation in Arabidopsis. DOI: 10.1111/jipb.13107 ; PMID: 33963671
- The deubiquitinases UBP12 and UBP13 integrate with the E3 ubiquitin ligase XBAT35.2 to modulate VPS23A stability in ABA signaling. DOI: 10.1126/sciadv.abl5765 ; PMID: 35385312
- PICLN modulates alternative splicing and light/temperature responses in plants. DOI: 10.1093/plphys/kiac527 ; PMID: 36423226
- Unexpected protein families including cell defense components feature in the N-myristoylome of a higher eukaryote. DOI: 10.1074/jbc.M307321200 ; PMID: 12912986
- Repertoire of plant RING E3 ubiquitin ligases revisited: New groups counting gene families and single genes. DOI: 10.1371/journal.pone.0203442 ; PMID: 30169501
Gene Resources
Homologs
- Oryza sativa OsBIANK1;XB25, XBOS252, Xbos251;XBOS251
Sequences
cDNA Sequence
- >AT3G23280.1
GAAACGTCAAACGTGAATTACAAAGTTGTTGTTTCCTCTGAATTTCTCAGAACTCTTCTTTGCTAAGGAAAAATTAAATATCCATCCAACTGTGTGAATTAGATATTTTCTCTTATCTCTTCTCTTTGTTCGATCAAAAATTCAATTTTCCCGAGATTTTTGTTTCTCTCGATCGATTCAACACCTAAAGATTGAAGCTTTTGCTCGTGGGTTATGTAAAGTTTCCACCTTTCGTCTTCTTTCTGATCTGTGAGCAAAAATGGGACAACAGCAATCAAAAGGGGAATTGCTGTATCAGCAAGTTAGTTATGGTAACTCTGAAGGAATTCGAGCTCTTCATCGAGATGGTGGAGACCTTGAGTGGATGGATAGAGAAGGAAAAACTCCGTTGATCTTGGCTTGTATGAACTCCGAGCTATTTGATGTTGCTAAGACTTTGATTGAGTTGGGTTCTAATGTTAATGCTTATCGTCCTGGTCGTCATGCTGGGACTCCTCTGCACCATGCTGCAAAAAGAGGTCTTGAGAACACTGTTAAGTTACTTCTTTCTCACGGTGCGAATCCACTTGTTCTTAATGATGATTGTCAGACACCACTTGAGGTCGCTAGAGTCAAAGGGTTTAGCAATGTTGTACGTGCAATTGAGAAACACATCTGCTTGTTCTCGGGTTGGATGCGTGAATTTTACGGCCCTACCTTTCTCGACTTATTTGCTCCGCAGCTTCTTTCAAGAAGAGTATGGGTAGTCATTGTACCTACTGGTTCAAGAAACCCTACAAAGCCTTTCAAGTTGGAGCTGGTTGTGTATGCTAGTCTGCAAGATGCACAGCCACGCACAGTGATGCCTTTGTGGAAAGCAAACTTGGAAGAACCAAAAGCGAAGCAGTCCGATACTTCAGTGATGATCGTTGATAACTCCACAATCCCAAGCCGCAGGATGAAGAAACGAAGGGTCTGCGCCTCCCACGGGAGACGTAGGCCTCAAGTAGTTAGGCAAACACGTCTTAAATTCGCACCTTCGACTGAAGGTGACAGCCAACAGCTAAAGTGGTTTTGTGATGCATGTAAAGGGATTCCACAGCCGATGCATCCACCGGTCTTCCTCCAAGCACCACCATCTGCTCCACCACCACCATCAGAAGATGGACTAGCCATGGGAATGAACGCCTCACTTCACACTACTATGAGTGACCCATCAAATCTCAATCACCATTCCATCGGTCAAGCAAGTTCCTCATCCGGTCCAAGCTCATCAACTGCACCTCCCTCAGGAAAAGCAAGTGCCTTTGGATTCAATAGCCATGGAATTGGCATTGTGCTAGAATCTTCACCATCAGCTCCTCCATTGACAGATGATGATATAGCTACAGTAGACGATGGTCCAATTCATTACCCATCAATCGATTCAACACCAGTCGATCTCCCATCTGCTGCTTCTCTTCCAGCTTCAACAGAAGGTGAAAGGAAAGAAGACGGGAACACTGGAACGTGTGCGATATGTCTCGATGCTCCATCTGAAGCAGTCTGTGTCCCGTGTGGACATGTCGCGGGATGTATGTCTTGCTTGAAGGAGATCAAATCCAAGAATTGGGGATGTCCCGTCTGTCGAGCCAAGATCGATCAGGTTATTAAGCTGTACCGTGTCTGAAAACAGGTATCAACAACAACATGGGATTATCTATATCCTTCATTGAACTATTGAAACTATATCTCTCTATTTACACAGCTAAAATCAATACCATGTTTTCTTTTTATCAAAAGCTAAAACAATATGTTTGTAATTTGGAACTTGATAAAAAACAGTTCCAGTATTTTGTATATATGTTTTTGGACAAAAGGAAGAATGTATCAATGTAAAGTGTGGTAATATATTCTGTATACAATATGCTTATTTATATTTGAATTGATAATATATTTTGTAATGAATCGTGGATTTGTTCCCAAAAGTAAGAACAGCATATTTAATCATTGTACGGAAAAAGTTGAATGGGTTAATAAACTGTTTGTGTTCTGATA - >AT3G23280.2
GAAACGTCAAACGTGAATTACAAAGTTGTTGTTTCCTCTGAATTTCTCAGAACTCTTCTTTGCTAAGGAAAAATTAAATATCCATCCAACTGTGTGAATTAGATATTTTCTCTTATCTCTTCTCTTTGTTCGATCAAAAATTCAATTTTCCCGAGATTTTTGTTTCTCTCGATCGATTCAACACCTAAAGATTGAAGCTTTTGCTCGTGGGTTATGTAAAGTTTCCACCTTTCGTCTTCTTTCTGATCTGTGAGCAAAAATGGGACAACAGCAATCAAAAGGGGAATTGCTGTATCAGCAAGTTAGTTATGGTAACTCTGAAGGAATTCGAGCTCTTCATCGAGATGGTGGAGACCTTGAGTGGATGGATAGAGAAGGAAAAACTCCGTTGATCTTGGCTTGTATGAACTCCGAGCTATTTGATGTTGCTAAGACTTTGATTGAGTTGGGTTCTAATGTTAATGCTTATCGTCCTGGTCGTCATGCTGGGACTCCTCTGCACCATGCTGCAAAAAGAGGTCTTGAGAACACTGTTAAGTTACTTCTTTCTCACGGTGCGAATCCACTTGTTCTTAATGATGATTGTCAGACACCACTTGAGGTCGCTAGAGTCAAAGGGTTTAGCAATGTTGTACGTGCAATTGAGAAACACATCTGCTTGTTCTCGGGTTGGATGCGTGAATTTTACGGCCCTACCTTTCTCGACTTATTTGCTCCGCAGCTTCTTTCAAGAAGAGTATGGGTAGTCATTGTACCTACTGGTTCAAGAAACCCTACAAAGCCTTTCAAGTTGGAGCTGGTTGTGTATGCTAGTCTGCAAGATGCACAGCCACGCACAGTGATGCCTTTGTGGAAAGCAAACTTGGAAGAACCAAAAGCGAAGCAGTCCGATACTTCAGTGATGATCGTTGATAACTCCACAATCCCAAGCCGCAGGATGAAGAAACGAAGGGTCTGCGCCTCCCACGGGAGACGTAGGCCTCAAGTAGTTAGGCAAACACGTCTTAAATTCGCACCTTCGACTGAAGGTGACAGCCAACAGCTAAAGTGGTTTTGTGATGCATGTAAAGGGATTCCACAGCCGATGCATCCACCGGTCTTCCTCCAAGCACCACCATCTGCTCCACCACCACCATCAGAAGATGGACTAGCCATGGGAATGAACGCCTCACTTCACACTACTATGAGTGACCCATCAAATCTCAATCACCATTCCATCGGTCAAGCAAGTTCCTCATCCGGTCCAAGCTCATCAACTGCACCTCCCTCAGGAAAAGCAAGTGCCTTTGGATTCAATAGCCATGGAATTGGCATTGTGCTAGAATCTTCACCATCAGCTCCTCCATTGACAGATGATGATATAGCTACAGTAGACGATGGTCCAATTCATTACCCATCAATCGATTCAACACCAGTCGATCTCCCATCTGCTGCTTCTCTTCCAGCTTCAACAGAAGGTGAAAGGAAAGAAGACGGGAACACTGGAACGTGTGCGATATGTCTCGATGCTCCATCTGAAGCAGTCTGTGTCCCGTGTGGACATGTCGCGGGATGTATGTCTTGCTTGAAGGAGATCAAATCCAAGAATTGGGGATGTCCCGTCTGTCGAGCCAAGATCGATCAGGTTATTAAGCTGTACCGTGTCTGAAAACAGGTATCAACAACAACATGGGATTATCTATATCCTTCATTGAACTATTGAAACTATATCTCTCTATTTACACAGCTAAAATCAATACCATGTTTTCTTTTTATCAAAAGCTAAAACAATATGTTTGTAATTTGGAACTTGATAAAAAACAGTTCCAGTATTTTGTATATATGTTTTTGGACAAAAGGAAGAATGTATCAATGTAAAGTGTGGTAATATATTCTGTATACAATATGCTTATTTATATTTGAATTGATAATATATTTTGTAATGAATCGTGGATTTGTTCCCAAAAGTAAGAACAGCATATTTAATCATTGTACGGAAAAAGTTGAATGGGTTAATAAACTGTTTGTGTTCTGATA
CDS Sequence
- >AT3G23280.1
ATGGGACAACAGCAATCAAAAGGGGAATTGCTGTATCAGCAAGTTAGTTATGGTAACTCTGAAGGAATTCGAGCTCTTCATCGAGATGGTGGAGACCTTGAGTGGATGGATAGAGAAGGAAAAACTCCGTTGATCTTGGCTTGTATGAACTCCGAGCTATTTGATGTTGCTAAGACTTTGATTGAGTTGGGTTCTAATGTTAATGCTTATCGTCCTGGTCGTCATGCTGGGACTCCTCTGCACCATGCTGCAAAAAGAGGTCTTGAGAACACTGTTAAGTTACTTCTTTCTCACGGTGCGAATCCACTTGTTCTTAATGATGATTGTCAGACACCACTTGAGGTCGCTAGAGTCAAAGGGTTTAGCAATGTTGTACGTGCAATTGAGAAACACATCTGCTTGTTCTCGGGTTGGATGCGTGAATTTTACGGCCCTACCTTTCTCGACTTATTTGCTCCGCAGCTTCTTTCAAGAAGAGTATGGGTAGTCATTGTACCTACTGGTTCAAGAAACCCTACAAAGCCTTTCAAGTTGGAGCTGGTTGTGTATGCTAGTCTGCAAGATGCACAGCCACGCACAGTGATGCCTTTGTGGAAAGCAAACTTGGAAGAACCAAAAGCGAAGCAGTCCGATACTTCAGTGATGATCGTTGATAACTCCACAATCCCAAGCCGCAGGATGAAGAAACGAAGGGTCTGCGCCTCCCACGGGAGACGTAGGCCTCAAGTAGTTAGGCAAACACGTCTTAAATTCGCACCTTCGACTGAAGGTGACAGCCAACAGCTAAAGTGGTTTTGTGATGCATGTAAAGGGATTCCACAGCCGATGCATCCACCGGTCTTCCTCCAAGCACCACCATCTGCTCCACCACCACCATCAGAAGATGGACTAGCCATGGGAATGAACGCCTCACTTCACACTACTATGAGTGACCCATCAAATCTCAATCACCATTCCATCGGTCAAGCAAGTTCCTCATCCGGTCCAAGCTCATCAACTGCACCTCCCTCAGGAAAAGCAAGTGCCTTTGGATTCAATAGCCATGGAATTGGCATTGTGCTAGAATCTTCACCATCAGCTCCTCCATTGACAGATGATGATATAGCTACAGTAGACGATGGTCCAATTCATTACCCATCAATCGATTCAACACCAGTCGATCTCCCATCTGCTGCTTCTCTTCCAGCTTCAACAGAAGGTGAAAGGAAAGAAGACGGGAACACTGGAACGTGTGCGATATGTCTCGATGCTCCATCTGAAGCAGTCTGTGTCCCGTGTGGACATGTCGCGGGATGTATGTCTTGCTTGAAGGAGATCAAATCCAAGAATTGGGGATGTCCCGTCTGTCGAGCCAAGATCGATCAGGTTATTAAGCTGTACCGTGTCTGA - >AT3G23280.2
ATGGGACAACAGCAATCAAAAGGGGAATTGCTGTATCAGCAAGTTAGTTATGGTAACTCTGAAGGAATTCGAGCTCTTCATCGAGATGGTGGAGACCTTGAGTGGATGGATAGAGAAGGAAAAACTCCGTTGATCTTGGCTTGTATGAACTCCGAGCTATTTGATGTTGCTAAGACTTTGATTGAGTTGGGTTCTAATGTTAATGCTTATCGTCCTGGTCGTCATGCTGGGACTCCTCTGCACCATGCTGCAAAAAGAGGTCTTGAGAACACTGTTAAGTTACTTCTTTCTCACGGTGCGAATCCACTTGTTCTTAATGATGATTGTCAGACACCACTTGAGGTCGCTAGAGTCAAAGGGTTTAGCAATGTTGTACGTGCAATTGAGAAACACATCTGCTTGTTCTCGGGTTGGATGCGTGAATTTTACGGCCCTACCTTTCTCGACTTATTTGCTCCGCAGCTTCTTTCAAGAAGAGTATGGGTAGTCATTGTACCTACTGGTTCAAGAAACCCTACAAAGCCTTTCAAGTTGGAGCTGGTTGTGTATGCTAGTCTGCAAGATGCACAGCCACGCACAGTGATGCCTTTGTGGAAAGCAAACTTGGAAGAACCAAAAGCGAAGCAGTCCGATACTTCAGTGATGATCGTTGATAACTCCACAATCCCAAGCCGCAGGATGAAGAAACGAAGGGTCTGCGCCTCCCACGGGAGACGTAGGCCTCAAGTAGTTAGGCAAACACGTCTTAAATTCGCACCTTCGACTGAAGGTGACAGCCAACAGCTAAAGTGGTTTTGTGATGCATGTAAAGGGATTCCACAGCCGATGCATCCACCGGTCTTCCTCCAAGCACCACCATCTGCTCCACCACCACCATCAGAAGATGGACTAGCCATGGGAATGAACGCCTCACTTCACACTACTATGAGTGACCCATCAAATCTCAATCACCATTCCATCGGTCAAGCAAGTTCCTCATCCGGTCCAAGCTCATCAACTGCACCTCCCTCAGGAAAAGCAAGTGCCTTTGGATTCAATAGCCATGGAATTGGCATTGTGCTAGAATCTTCACCATCAGCTCCTCCATTGACAGATGATGATATAGCTACAGTAGACGATGGTCCAATTCATTACCCATCAATCGATTCAACACCAGTCGATCTCCCATCTGCTGCTTCTCTTCCAGCTTCAACAGAAGGTGAAAGGAAAGAAGACGGGAACACTGGAACGTGTGCGATATGTCTCGATGCTCCATCTGAAGCAGTCTGTGTCCCGTGTGGACATGTCGCGGGATGTATGTCTTGCTTGAAGGAGATCAAATCCAAGAATTGGGGATGTCCCGTCTGTCGAGCCAAGATCGATCAGGTTATTAAGCTGTACCGTGTCTGA
Protein Sequence
- >AT3G23280.1
MGQQQSKGELLYQQVSYGNSEGIRALHRDGGDLEWMDREGKTPLILACMNSELFDVAKTLIELGSNVNAYRPGRHAGTPLHHAAKRGLENTVKLLLSHGANPLVLNDDCQTPLEVARVKGFSNVVRAIEKHICLFSGWMREFYGPTFLDLFAPQLLSRRVWVVIVPTGSRNPTKPFKLELVVYASLQDAQPRTVMPLWKANLEEPKAKQSDTSVMIVDNSTIPSRRMKKRRVCASHGRRRPQVVRQTRLKFAPSTEGDSQQLKWFCDACKGIPQPMHPPVFLQAPPSAPPPPSEDGLAMGMNASLHTTMSDPSNLNHHSIGQASSSSGPSSSTAPPSGKASAFGFNSHGIGIVLESSPSAPPLTDDDIATVDDGPIHYPSIDSTPVDLPSAASLPASTEGERKEDGNTGTCAICLDAPSEAVCVPCGHVAGCMSCLKEIKSKNWGCPVCRAKIDQVIKLYRV - >AT3G23280.2
MGQQQSKGELLYQQVSYGNSEGIRALHRDGGDLEWMDREGKTPLILACMNSELFDVAKTLIELGSNVNAYRPGRHAGTPLHHAAKRGLENTVKLLLSHGANPLVLNDDCQTPLEVARVKGFSNVVRAIEKHICLFSGWMREFYGPTFLDLFAPQLLSRRVWVVIVPTGSRNPTKPFKLELVVYASLQDAQPRTVMPLWKANLEEPKAKQSDTSVMIVDNSTIPSRRMKKRRVCASHGRRRPQVVRQTRLKFAPSTEGDSQQLKWFCDACKGIPQPMHPPVFLQAPPSAPPPPSEDGLAMGMNASLHTTMSDPSNLNHHSIGQASSSSGPSSSTAPPSGKASAFGFNSHGIGIVLESSPSAPPLTDDDIATVDDGPIHYPSIDSTPVDLPSAASLPASTEGERKEDGNTGTCAICLDAPSEAVCVPCGHVAGCMSCLKEIKSKNWGCPVCRAKIDQVIKLYRV