Gene Details:
- Gene ID: AT3G23060
- Gene Symbol: ATBM1C
- Gene Name:
- Description: RING/U-box superfamily protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
Function-related keywords:
Literature:
- Evaluation and classification of RING-finger domains encoded by the Arabidopsis genome. DOI: 10.1186/gb-2002-3-4-research0016 ; PMID: 11983057
- Transcriptome analysis of proliferating Arabidopsis endosperm reveals biological implications for the control of syncytial division, cytokinin signaling, and gene expression regulation. DOI: 10.1104/pp.108.128108 ; PMID: 18923020
- Arabidopsis female gametophyte gene expression map reveals similarities between plant and animal gametes. DOI: 10.1016/j.cub.2010.01.051 ; PMID: 20226671
- Keeping cell identity in Arabidopsis requires PRC1 RING-finger homologs that catalyze H2A monoubiquitination. DOI: 10.1016/j.cub.2010.09.046 ; PMID: 20933424
- Overexpression of AtBMI1C, a polycomb group protein gene, accelerates flowering in Arabidopsis. DOI: 10.1371/journal.pone.0021364 ; PMID: 21701597
- Deciphering the Role of POLYCOMB REPRESSIVE COMPLEX1 Variants in Regulating the Acquisition of Flowering Competence in Arabidopsis. DOI: 10.1104/pp.15.00073 ; PMID: 25897002
- RAWUL: a new ubiquitin-like domain in PRC1 ring finger proteins that unveils putative plant and worm PRC1 orthologs. DOI: 10.1186/1471-2164-9-308 ; PMID: 18588675
- Repertoire of plant RING E3 ubiquitin ligases revisited: New groups counting gene families and single genes. DOI: 10.1371/journal.pone.0203442 ; PMID: 30169501
Sequences:
cDNA Sequence
- >AT3G23060.2
ACACAGATTTTTTTTTTCTCTGAGAGAGACAGAGAGAGCGAAACTTGAGAGACCAAAATCCAATCTTTTCAACAATCGATTCTCTCTGAGAAAACCAACAATAAAGCTAGACACTTTTTTTTGTGGGTTTGTCTTCTTCTTCGTTCATGCACCATGTTGTGTTACGTGAACGAAGAAGCTATATAATCAATAAATCTTATCGATTTGTTGAGTTTGGGAATCGGAGAGAAAGATGTTAACAAAGGTGCTTAGTAAGGAGGTTAAGCCATGCCTTGCTTGTCCAATCTGCACTAATCCGTTTAAGGATGCCACCACAATCTCCGAGTGTCTCCACACCTTTTGCAGGAGCTGCATTCGTAACAAGTTCATAAATGAGAGAGTGAACGCTTGTCCAGTCTGCAACGTTAACCTCGGTGTTTTTCCTCTAGAGAAACTTCGGTCGGATTGCACTTGGCAGGATTTGAAGCTGAAAATCTACCGAGCAATGATGGAAAGCTTAAAGAAGGCAGGACCTAAAACTGTTGCAGCGTCTGTGAAATCTTCGAAAAAGAAGAGAAAATCTCGAACTTCACTGCGGGTCTCTTCATCTAGAGTATCATCCTCACCTGATACTCCATTGGAACCAGCCAATGTGGTTGTGGAACCACCTAATGTGGTTGTGGAGGAGAAACATAGGGAGACCGTTCTAGCTCTTCAAAGCACTAGAAAACCGATAATCACGTTCCAGAAACGTGGGAGAAAAGCTTCACTCCCGAAGAAGATTGATTCGAAACCAGAACCCGAACTGCCTCCTAAGGAGCCTAAAATTAAGAATCTATTTGACCTGAACAACGAACCTGAAGACAATGGATTGGACGAAGCTGAAGGATCAACTTTTCAGGAAGTCGTACCAAAGGAGAAAGATCTTTGTAAACCTATTTTCTCTCTCTCTGTCACTCTAAACATCAACGATACTCCTCCTGATATCGTTGAGCCTGAGATAAGTTCGGATGACGACACAGAGGAATCTGTTGAACCTATTCAGAACAAGTGTGTTGTGAATAGAGAAACAAAGGAAGTTCCTGTTCAAGTGAATCAAAACAGTCTCCTTATTAGCTCTGATAGGGATAGAGAGGACAACTCTGGTCAGAAACTGAAGACCAATGGTGCTGCTACCTCCAGATCAAGGAAGAAGAAAGGTAAGAAACCGGTGGAAAAGAGCTATTCTTTGAGACCCCGAATAGGCAGGAGGACGGTTAATCCAGCAGCTGGTACTACTACACCAGAAGCTCCGGTTTCCGTGGAAGAGGAGATGAAAGTTGAAGAAGGACGTAACAACAATCCAGACTCGGTTTCTTCGGTTTTCAGGAACATTGAAATGCTACTTCCACCGATCACCGCTTGCTGCATAAGAGTAAAAGATAGCAACATGACTGTCTCATATCTCAAGAAGTATCTAATGGTGAAGCTCGGTCTCGAAAGCGAAGACCAAGTGGAGATATGGTTAAGGGATGAGCCAGTGTGTTCGTCACTGACACTACATAACTTGGTGGATTGGTGGGTCCAAACAACTCCATTGCCTGAGCGACAAAGCGCGATGGTCGGAAGCTCCGCTGCTGAATTCATCATGGATCTCTATTACAGCTTCAAATCTGACGCCTCTGACTCTGGCTCTGCCTCTGAATAATTCTTCTCAGAACTTCAAACTTTACTCTTCTTCTAAACTCATTTCTTGCAGAATAAGTTTCTTTTGAAAGACTTCTAGTTTTAGCATCTTTCTTTATTTAATAATTGCTGAGACCTAAATATGGAAAACTCTTTATTTATTTGATTTGCTTGCTTTTTGAGGACTCAAACGGTATCGTTTTGTACTAATTAAATAGAAGCTCATTTTAGCTAGCTTGAG - >AT3G23060.1
ACACAGATTTTTTTTTTCTCTGAGAGAGACAGAGAGAGCGAAACTTGAGAGACCAAAATCCAATCTTTTCAACAATCGATTCTCTCTGAGAAAACCAACAATAAAGCTAGACACTTTTTTTTGTGGGTTTGTCTTCTTCTTCGTTCATGCACCATGTTGTGTTACGTGAACGAAGAAGCTATATAATCAATAAATCTTATCGATTTGTTGAGTTTGGGAATCGGAGAGAAAGATGTTAACAAAGGTGCTTAGTAAGGAGGTTAAGCCATGCCTTGCTTGTCCAATCTGCACTAATCCGTTTAAGGATGCCACCACAATCTCCGAGTGTCTCCACACCTTTTGCAGGAGCTGCATTCGTAACAAGTTCATAAATGAGAGAGTGAACGCTTGTCCAGTCTGCAACGTTAACCTCGGTGTTTTTCCTCTAGAGAAACTTCGGTCGGATTGCACTTGGCAGGATTTGAAGCTGAAAATCTACCGAGCAATGATGGAAAGCTTAAAGAAGGCAGGACCTAAAACTGTTGCAGCGTCTGTGAAATCTTCGAAAAAGAAGAGAAAATCTCGAACTTCACTGCGGGTCTCTTCATCTAGAGTATCATCCTCACCTGATACTCCATTGGAACCAGCCAATGTGGTTGTGGAACCACCTAATGTGGTTGTGGAGGAGAAACATAGGGAGACCGTTCTAGCTCTTCAAAGCACTAGAAAACCGATAATCACGTTCCAGAAACGTGGGAGAAAAGCTTCACTCCCGAAGAAGATTGATTCGAAACCAGAACCCGAACTGCCTCCTAAGGAGCCTAAAATTAAGAATCTATTTGACCTGAACAACGAACCTGAAGACAATGGATTGGACGAAGCTGAAGGATCAACTTTTCAGGAAGTCGTACCAAAGGAGAAAGATCTTTGTAAACCTATTTTCTCTCTCTCTGTCACTCTAAACATCAACGATACTCCTCCTGATATCGTTGAGCCTGAGATAAGTTCGGATGACGACACAGAGGAATCTGTTGAACCTATTCAGAACAAGTGTGTTGTGAATAGAGAAACAAAGGAAGTTCCTGTTCAAGTGAATCAAAACAGTCTCCTTATTAGCTCTGATAGGGATAGAGAGGACAACTCTGGTCAGAAACTGAAGACCAATGGTGCTGCTACCTCCAGATCAAGGAAGAAGAAAGGTAAGAAACCGGTGGAAAAGAGCTATTCTTTGAGACCCCGAATAGGCAGGAGGACGGTTAATCCAGCAGCTGGTACTACTACACCAGAAGCTCCGGTTTCCGTGGAAGAGGAGATGAAAGTTGAAGAAGGACGTAACAACAATCCAGACTCGGTTTCTTCGGTTTTCAGGAACATTGAAATGCTACTTCCACCGATCACCGCTTGCTGCATAAGAGTAAAAGATAGCAACATGACTGTCTCATATCTCAAGAAGTATCTAATGGTGAAGCTCGGTCTCGAAAGCGAAGACCAAGTGGAGATATGGTTAAGGGATGAGCCAGTGTGTTCGTCACTGACACTACATAACTTGGTGGATTGGTGGGTCCAAACAACTCCATTGCCTGAGCGACAAAGCGCGATGGTCGGAAGCTCCGCTGCTGAATTCATCATGGATCTCTATTACAGCTTCAAATCTGACGCCTCTGACTCTGGCTCTGCCTCTGAATAATTCTTCTCAGAACTTCAAACTTTACTCTTCTTCTAAACTCATTTCTTGCAGAATAAGTTTCTTTTGAAAGACTTCTAGTTTTAGCATCTTTCTTTATTTAATAATTGCTGAGACCTAAATATGGAAAACTCTTTATTTATTTGATTTGCTTGCTTTTTGAGGACTCAAACGGTATCGTTTTGTACTAATTAAATAGAAGCTCATTTTAGCTAGCTTGAG
CDS Sequence
- >AT3G23060.2
ATGTTAACAAAGGTGCTTAGTAAGGAGGTTAAGCCATGCCTTGCTTGTCCAATCTGCACTAATCCGTTTAAGGATGCCACCACAATCTCCGAGTGTCTCCACACCTTTTGCAGGAGCTGCATTCGTAACAAGTTCATAAATGAGAGAGTGAACGCTTGTCCAGTCTGCAACGTTAACCTCGGTGTTTTTCCTCTAGAGAAACTTCGGTCGGATTGCACTTGGCAGGATTTGAAGCTGAAAATCTACCGAGCAATGATGGAAAGCTTAAAGAAGGCAGGACCTAAAACTGTTGCAGCGTCTGTGAAATCTTCGAAAAAGAAGAGAAAATCTCGAACTTCACTGCGGGTCTCTTCATCTAGAGTATCATCCTCACCTGATACTCCATTGGAACCAGCCAATGTGGTTGTGGAACCACCTAATGTGGTTGTGGAGGAGAAACATAGGGAGACCGTTCTAGCTCTTCAAAGCACTAGAAAACCGATAATCACGTTCCAGAAACGTGGGAGAAAAGCTTCACTCCCGAAGAAGATTGATTCGAAACCAGAACCCGAACTGCCTCCTAAGGAGCCTAAAATTAAGAATCTATTTGACCTGAACAACGAACCTGAAGACAATGGATTGGACGAAGCTGAAGGATCAACTTTTCAGGAAGTCGTACCAAAGGAGAAAGATCTTTGTAAACCTATTTTCTCTCTCTCTGTCACTCTAAACATCAACGATACTCCTCCTGATATCGTTGAGCCTGAGATAAGTTCGGATGACGACACAGAGGAATCTGTTGAACCTATTCAGAACAAGTGTGTTGTGAATAGAGAAACAAAGGAAGTTCCTGTTCAAGTGAATCAAAACAGTCTCCTTATTAGCTCTGATAGGGATAGAGAGGACAACTCTGGTCAGAAACTGAAGACCAATGGTGCTGCTACCTCCAGATCAAGGAAGAAGAAAGGTAAGAAACCGGTGGAAAAGAGCTATTCTTTGAGACCCCGAATAGGCAGGAGGACGGTTAATCCAGCAGCTGGTACTACTACACCAGAAGCTCCGGTTTCCGTGGAAGAGGAGATGAAAGTTGAAGAAGGACGTAACAACAATCCAGACTCGGTTTCTTCGGTTTTCAGGAACATTGAAATGCTACTTCCACCGATCACCGCTTGCTGCATAAGAGTAAAAGATAGCAACATGACTGTCTCATATCTCAAGAAGTATCTAATGGTGAAGCTCGGTCTCGAAAGCGAAGACCAAGTGGAGATATGGTTAAGGGATGAGCCAGTGTGTTCGTCACTGACACTACATAACTTGGTGGATTGGTGGGTCCAAACAACTCCATTGCCTGAGCGACAAAGCGCGATGGTCGGAAGCTCCGCTGCTGAATTCATCATGGATCTCTATTACAGCTTCAAATCTGACGCCTCTGACTCTGGCTCTGCCTCTGAATAA - >AT3G23060.1
ATGTTAACAAAGGTGCTTAGTAAGGAGGTTAAGCCATGCCTTGCTTGTCCAATCTGCACTAATCCGTTTAAGGATGCCACCACAATCTCCGAGTGTCTCCACACCTTTTGCAGGAGCTGCATTCGTAACAAGTTCATAAATGAGAGAGTGAACGCTTGTCCAGTCTGCAACGTTAACCTCGGTGTTTTTCCTCTAGAGAAACTTCGGTCGGATTGCACTTGGCAGGATTTGAAGCTGAAAATCTACCGAGCAATGATGGAAAGCTTAAAGAAGGCAGGACCTAAAACTGTTGCAGCGTCTGTGAAATCTTCGAAAAAGAAGAGAAAATCTCGAACTTCACTGCGGGTCTCTTCATCTAGAGTATCATCCTCACCTGATACTCCATTGGAACCAGCCAATGTGGTTGTGGAACCACCTAATGTGGTTGTGGAGGAGAAACATAGGGAGACCGTTCTAGCTCTTCAAAGCACTAGAAAACCGATAATCACGTTCCAGAAACGTGGGAGAAAAGCTTCACTCCCGAAGAAGATTGATTCGAAACCAGAACCCGAACTGCCTCCTAAGGAGCCTAAAATTAAGAATCTATTTGACCTGAACAACGAACCTGAAGACAATGGATTGGACGAAGCTGAAGGATCAACTTTTCAGGAAGTCGTACCAAAGGAGAAAGATCTTTGTAAACCTATTTTCTCTCTCTCTGTCACTCTAAACATCAACGATACTCCTCCTGATATCGTTGAGCCTGAGATAAGTTCGGATGACGACACAGAGGAATCTGTTGAACCTATTCAGAACAAGTGTGTTGTGAATAGAGAAACAAAGGAAGTTCCTGTTCAAGTGAATCAAAACAGTCTCCTTATTAGCTCTGATAGGGATAGAGAGGACAACTCTGGTCAGAAACTGAAGACCAATGGTGCTGCTACCTCCAGATCAAGGAAGAAGAAAGGTAAGAAACCGGTGGAAAAGAGCTATTCTTTGAGACCCCGAATAGGCAGGAGGACGGTTAATCCAGCAGCTGGTACTACTACACCAGAAGCTCCGGTTTCCGTGGAAGAGGAGATGAAAGTTGAAGAAGGACGTAACAACAATCCAGACTCGGTTTCTTCGGTTTTCAGGAACATTGAAATGCTACTTCCACCGATCACCGCTTGCTGCATAAGAGTAAAAGATAGCAACATGACTGTCTCATATCTCAAGAAGTATCTAATGGTGAAGCTCGGTCTCGAAAGCGAAGACCAAGTGGAGATATGGTTAAGGGATGAGCCAGTGTGTTCGTCACTGACACTACATAACTTGGTGGATTGGTGGGTCCAAACAACTCCATTGCCTGAGCGACAAAGCGCGATGGTCGGAAGCTCCGCTGCTGAATTCATCATGGATCTCTATTACAGCTTCAAATCTGACGCCTCTGACTCTGGCTCTGCCTCTGAATAA
Protein Sequence
- >AT3G23060.2
MLTKVLSKEVKPCLACPICTNPFKDATTISECLHTFCRSCIRNKFINERVNACPVCNVNLGVFPLEKLRSDCTWQDLKLKIYRAMMESLKKAGPKTVAASVKSSKKKRKSRTSLRVSSSRVSSSPDTPLEPANVVVEPPNVVVEEKHRETVLALQSTRKPIITFQKRGRKASLPKKIDSKPEPELPPKEPKIKNLFDLNNEPEDNGLDEAEGSTFQEVVPKEKDLCKPIFSLSVTLNINDTPPDIVEPEISSDDDTEESVEPIQNKCVVNRETKEVPVQVNQNSLLISSDRDREDNSGQKLKTNGAATSRSRKKKGKKPVEKSYSLRPRIGRRTVNPAAGTTTPEAPVSVEEEMKVEEGRNNNPDSVSSVFRNIEMLLPPITACCIRVKDSNMTVSYLKKYLMVKLGLESEDQVEIWLRDEPVCSSLTLHNLVDWWVQTTPLPERQSAMVGSSAAEFIMDLYYSFKSDASDSGSASE - >AT3G23060.1
MLTKVLSKEVKPCLACPICTNPFKDATTISECLHTFCRSCIRNKFINERVNACPVCNVNLGVFPLEKLRSDCTWQDLKLKIYRAMMESLKKAGPKTVAASVKSSKKKRKSRTSLRVSSSRVSSSPDTPLEPANVVVEPPNVVVEEKHRETVLALQSTRKPIITFQKRGRKASLPKKIDSKPEPELPPKEPKIKNLFDLNNEPEDNGLDEAEGSTFQEVVPKEKDLCKPIFSLSVTLNINDTPPDIVEPEISSDDDTEESVEPIQNKCVVNRETKEVPVQVNQNSLLISSDRDREDNSGQKLKTNGAATSRSRKKKGKKPVEKSYSLRPRIGRRTVNPAAGTTTPEAPVSVEEEMKVEEGRNNNPDSVSSVFRNIEMLLPPITACCIRVKDSNMTVSYLKKYLMVKLGLESEDQVEIWLRDEPVCSSLTLHNLVDWWVQTTPLPERQSAMVGSSAAEFIMDLYYSFKSDASDSGSASE