Information report for AT3G23000
Gene Details
|
|
Functional Descriptions
- PO:0000036 — leaf vascular system — sistema vascular de la hoja (Spanish, exact), 葉維管系 (Japanese, exact), leaf venation (related)
- PO:0003011 — root vascular system — sistema vascular de la raíz (Spanish, exact), 根維管系 (Japanese, exact), root vein (related)
- PO:0008012 — stigma vascular system — sistema vascular del estigma (Spanish, exact), 柱頭維管系 (Japanese, exact), stigma vein (related)
- PO:0009010 — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
- PO:0019018 — plant embryo axis — eje del embrión (Spanish, exact), hypocotyl-root axis (exact), 植物胚軸 (Japanese, exact), zygotic plant embryo axis (narrow), embryo axis (broad)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000014 — rosette leaf — hoja en roseta (Spanish, exact), ロゼット葉 (Japanese, exact)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
Functional Keywords
- leaf vascular system , root vascular system , stigma vascular system , seed , plant embryo axis , hypocotyl , shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , rosette leaf , root , flower , stem
Literature and News
- The NAF domain defines a novel protein-protein interaction module conserved in Ca2+-regulated kinases. DOI: 10.1093/emboj/20.5.1051 ; PMID: 11230129
- The Arabidopsis CDPK-SnRK superfamily of protein kinases. DOI: 10.1104/pp.102.011999 ; PMID: 12805596
- Microarray analysis of E2Fa-DPa-overexpressing plants uncovers a cross-talking genetic network between DNA replication and nitrogen assimilation. DOI: 10.1242/jcs.00715 ; PMID: 12953064
- Calmodulins and calcineurin B-like proteins: calcium sensors for specific signal response coupling in plants. DOI: 10.1105/tpc.001115 ; PMID: 12045290
- Calcium sensors and their interacting protein kinases: genomics of the Arabidopsis and rice CBL-CIPK signaling networks. DOI: 10.1104/pp.103.033068 ; PMID: 14730064
- Impaired sucrose induction1 encodes a conserved plant-specific protein that couples carbohydrate availability to gene expression and plant growth. DOI: 10.1111/j.1365-313X.2006.02765.x ; PMID: 16805736
- Arabidopsis phosphatidylinositol phosphate kinase 1 binds F-actin and recruits phosphatidylinositol 4-kinase beta1 to the actin cytoskeleton. DOI: 10.1074/jbc.M611728200 ; PMID: 17379598
- Comparison between a coffee single copy chromosomal region and Arabidopsis duplicated counterparts evidenced high level synteny between the coffee genome and the ancestral Arabidopsis genome. DOI: 10.1007/s11103-007-9191-6 ; PMID: 17551672
- Autophosphorylation profiling of Arabidopsis protein kinases using the cell-free system. DOI: 10.1016/j.phytochem.2011.02.029 ; PMID: 21477822
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Arabidopsis CBL-Interacting Protein Kinases Regulate Carbon/Nitrogen-Nutrient Response by Phosphorylating Ubiquitin Ligase ATL31. DOI: 10.1016/j.molp.2017.01.005 ; PMID: 28111287
- Arabidopsis phosphatidylinositol phosphate kinase 1 binds F-actin and recruits phosphatidylinositol 4-kinase beta1 to the actin cytoskeleton. DOI: 10.1074/jbc.M611728200 ; PMID: 17379598
Gene Resources
- UniProt: A0A178VLC2
- EMBL: CACRSJ010000106, CACSHJ010000089, LR881468
- AlphaFoldDB: A0A178VLC2
- EnsemblPlants: AT3G23000.1
- Gramene: AT3G23000.1
- KEGG: ath:AT3G23000
- Orthologous matrix: MEPRIIC
- ExpressionAtlas: AT3G23000
- InterPro: IPR000719, IPR004041, IPR008271
- PANTHER: PTHR43895, PTHR43895:SF33
- SUPFAM: SSF56112
- PROSITE: PS00107, PS00108, PS50011
- Gene3D: 1.10.510.10, 3.30.200.20, 3.30.310.80
- OrthoDB: A0A178VLC2
- SWISS-MODEL: A0A178VLC2
- Conserved Domain Database: cd12195
Sequences
cDNA Sequence
- >AT3G23000.1
AAAGATTCTACTTCTCAGTGACAGCAGAACTAATTTATTCAAGGGTAGTTTCGGAATAATAAAAAAGCAATAAATCTCTTTTTCCTATAAAAGCAAAGAGACACTCACCAAACAACTCGTCCCTGAAACCTCTCTTCAGAAAACTCAGGCACCATTTTCTCCTTCCGCCGCCGCCATGGAATCACTTCCCCAGCCGCAAAACCAATCATCTCCGGCAACAACTCCGGCGAAGATCCTCCTTGGGAAATACGAACTCGGTCGTCGTCTCGGTAGCGGAAGCTTCGCGAAAGTCCATTTAGCTCGATCAATCGAATCCGACGAGCTCGTCGCCGTTAAAATCATCGAGAAGAAGAAAACAATCGAATCCGGTATGGAACCAAGAATAATCAGAGAGATCGATGCGATGCGTCGTCTTCGTCATCATCCAAACATACTCAAGATCCATGAAGTTATGGCAACCAAATCTAAGATCTATCTCGTAATGGAACTCGCTTCCGGTGGTGAACTTTTCTCAAAAGTCCTCCGTCGTGGACGTCTTCCTGAATCAACGGCGCGTCGTTACTTTCAACAACTCGCCTCCGCTCTTCGTTTCTCTCACCAAGACGGTGTCGCTCACCGTGATGTGAAACCTCAGAATCTACTCTTAGATGAGCAAGGTAACCTCAAGGTCTCTGACTTTGGTTTATCAGCTTTACCGGAGCATCTACAAAACGGATTGCTTCACACGGCGTGTGGTACTCCGGCTTATACAGCTCCGGAGGTTATTTCACGGAGGGGATACGACGGAGCAAAAGCTGATGCGTGGTCTTGTGGTGTGATTTTGTTTGTTTTATTGGTTGGCGATGTTCCATTTGATGATTCGAATATCGCTGCGATGTATCGGAAGATTCATCGGAGAGATTATCGGTTTCCGAGCTGGATTTCGAAACAAGCTAAATCGATAATCTATCAGATGTTAGATCCGAATCCAGTAACGAGGATGAGTATTGAAACAGTGATGAAAACGAATTGGTTCAAGAAGTCTCTAGAGACTTCTGAGTTTCATCGTAACGTCTTTGATTCGGAAGTAGAGATGAAATCGAGTGTTAATTCGATTACTGCTTTTGATTTGATCTCGTTATCGTCGGGATTAGATCTTTCTGGATTGTTTGAGGCTAAGAAGAAGAAGGAGAGGAGATTCACGGCGAAGGTTTCGGGTGTTGAAGTGGAGGAGAAGGCGAAGATGATTGGGGAGAAGTTAGGTTATGTAGTGAAGAAGAAGATGATGAAGAAGGAAGGAGAAGTGAAGGTTGTTGGATTAGGGAGAGGAAGAACTGTGATTGTGGTGGAAGCAGTGGAGTTAACGGTGGATGTTGTGGTGGTTGAAGTGAAAGTTGTTGAAGGTGAAGAAGATGATTCACGGTGGTCTGATTTGATTACTGAGCTTGAAGATATAGTTCTTTCATGGCACAATGACATCATGTAAATAGATTGTGACTTTGTGGATTTTAGTCTCTTTTTTGTTTTGTTTCTGTTCAGTTTTGTATAATCCATGAAGAAATCAAAATCTCCCGCTTCATTGTCTTTTTACCAGCAGATACATTACCCTCTCTGCTACCGATTCCATAAGCTTTGATCACTACATGGTACTCAATAATGATTCTCTTATTCGCTCCTTGTCGCTA
CDS Sequence
- >AT3G23000.1
ATGGAATCACTTCCCCAGCCGCAAAACCAATCATCTCCGGCAACAACTCCGGCGAAGATCCTCCTTGGGAAATACGAACTCGGTCGTCGTCTCGGTAGCGGAAGCTTCGCGAAAGTCCATTTAGCTCGATCAATCGAATCCGACGAGCTCGTCGCCGTTAAAATCATCGAGAAGAAGAAAACAATCGAATCCGGTATGGAACCAAGAATAATCAGAGAGATCGATGCGATGCGTCGTCTTCGTCATCATCCAAACATACTCAAGATCCATGAAGTTATGGCAACCAAATCTAAGATCTATCTCGTAATGGAACTCGCTTCCGGTGGTGAACTTTTCTCAAAAGTCCTCCGTCGTGGACGTCTTCCTGAATCAACGGCGCGTCGTTACTTTCAACAACTCGCCTCCGCTCTTCGTTTCTCTCACCAAGACGGTGTCGCTCACCGTGATGTGAAACCTCAGAATCTACTCTTAGATGAGCAAGGTAACCTCAAGGTCTCTGACTTTGGTTTATCAGCTTTACCGGAGCATCTACAAAACGGATTGCTTCACACGGCGTGTGGTACTCCGGCTTATACAGCTCCGGAGGTTATTTCACGGAGGGGATACGACGGAGCAAAAGCTGATGCGTGGTCTTGTGGTGTGATTTTGTTTGTTTTATTGGTTGGCGATGTTCCATTTGATGATTCGAATATCGCTGCGATGTATCGGAAGATTCATCGGAGAGATTATCGGTTTCCGAGCTGGATTTCGAAACAAGCTAAATCGATAATCTATCAGATGTTAGATCCGAATCCAGTAACGAGGATGAGTATTGAAACAGTGATGAAAACGAATTGGTTCAAGAAGTCTCTAGAGACTTCTGAGTTTCATCGTAACGTCTTTGATTCGGAAGTAGAGATGAAATCGAGTGTTAATTCGATTACTGCTTTTGATTTGATCTCGTTATCGTCGGGATTAGATCTTTCTGGATTGTTTGAGGCTAAGAAGAAGAAGGAGAGGAGATTCACGGCGAAGGTTTCGGGTGTTGAAGTGGAGGAGAAGGCGAAGATGATTGGGGAGAAGTTAGGTTATGTAGTGAAGAAGAAGATGATGAAGAAGGAAGGAGAAGTGAAGGTTGTTGGATTAGGGAGAGGAAGAACTGTGATTGTGGTGGAAGCAGTGGAGTTAACGGTGGATGTTGTGGTGGTTGAAGTGAAAGTTGTTGAAGGTGAAGAAGATGATTCACGGTGGTCTGATTTGATTACTGAGCTTGAAGATATAGTTCTTTCATGGCACAATGACATCATGTAA
Protein Sequence
- >AT3G23000.1
MESLPQPQNQSSPATTPAKILLGKYELGRRLGSGSFAKVHLARSIESDELVAVKIIEKKKTIESGMEPRIIREIDAMRRLRHHPNILKIHEVMATKSKIYLVMELASGGELFSKVLRRGRLPESTARRYFQQLASALRFSHQDGVAHRDVKPQNLLLDEQGNLKVSDFGLSALPEHLQNGLLHTACGTPAYTAPEVISRRGYDGAKADAWSCGVILFVLLVGDVPFDDSNIAAMYRKIHRRDYRFPSWISKQAKSIIYQMLDPNPVTRMSIETVMKTNWFKKSLETSEFHRNVFDSEVEMKSSVNSITAFDLISLSSGLDLSGLFEAKKKKERRFTAKVSGVEVEEKAKMIGEKLGYVVKKKMMKKEGEVKVVGLGRGRTVIVVEAVELTVDVVVVEVKVVEGEEDDSRWSDLITELEDIVLSWHNDIM