Information report for AT3G22960
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Functional Keywords
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , guard cell
Literature and News
- Contrapuntal networks of gene expression during Arabidopsis seed filling. DOI: 10.1105/tpc.000877 ; PMID: 12084821
- Genomic evidence for COP1 as a repressor of light-regulated gene expression and development in Arabidopsis. DOI: 10.1105/tpc.004416 ; PMID: 12368493
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Comparative analysis of expressed sequence tags from Sesamum indicum and Arabidopsis thaliana developing seeds. DOI: 10.1023/b:plan.0000004304.22770.e9 ; PMID: 14682612
- Linking protein fractionation with multidimensional monolithic reversed-phase peptide chromatography/mass spectrometry enhances protein identification from complex mixtures even in the presence of abundant proteins. DOI: 10.1002/rcm.1376 ; PMID: 15052571
- Coordination of nuclear and mitochondrial genome expression during mitochondrial biogenesis in Arabidopsis. DOI: 10.1105/tpc.104.030254 ; PMID: 15829605
- The early responses of Arabidopsis thaliana cells to cadmium exposure explored by protein and metabolite profiling analyses. DOI: 10.1002/pmic.200500543 ; PMID: 16502469
- Delayed embryo development in the ARABIDOPSIS TREHALOSE-6-PHOSPHATE SYNTHASE 1 mutant is associated with altered cell wall structure, decreased cell division and starch accumulation. DOI: 10.1111/j.1365-313X.2006.02662.x ; PMID: 16553896
- WRI1 is required for seed germination and seedling establishment. DOI: 10.1104/pp.106.079574 ; PMID: 16632590
- Integration of metabolite with transcript and enzyme activity profiling during diurnal cycles in Arabidopsis rosettes. DOI: 10.1186/gb-2006-7-8-R76 ; PMID: 16916443
- Limitation of nocturnal import of ATP into Arabidopsis chloroplasts leads to photooxidative damage. DOI: 10.1111/j.1365-313X.2007.03049.x ; PMID: 17355434
- WRINKLED1 specifies the regulatory action of LEAFY COTYLEDON2 towards fatty acid metabolism during seed maturation in Arabidopsis. DOI: 10.1111/j.1365-313X.2007.03092.x ; PMID: 17419836
- A heteromeric plastidic pyruvate kinase complex involved in seed oil biosynthesis in Arabidopsis. DOI: 10.1105/tpc.106.048629 ; PMID: 17557808
- Comparison between a coffee single copy chromosomal region and Arabidopsis duplicated counterparts evidenced high level synteny between the coffee genome and the ancestral Arabidopsis genome. DOI: 10.1007/s11103-007-9191-6 ; PMID: 17551672
- Molecular physiological analysis of the two plastidic ATP/ADP transporters from Arabidopsis. DOI: 10.1104/pp.104.049502 ; PMID: 15516503
- Function of plastidial pyruvate kinases in seeds of Arabidopsis thaliana. DOI: 10.1111/j.1365-313X.2007.03232.x ; PMID: 17892448
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Systems analysis of seed filling in Arabidopsis: using general linear modeling to assess concordance of transcript and protein expression. DOI: 10.1104/pp.109.152413 ; PMID: 20118269
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
- The early responses of Arabidopsis thaliana cells to cadmium exposure explored by protein and metabolite profiling analyses. DOI: 10.1002/pmic.200500543 ; PMID: 16502469
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- The oligomeric stromal proteome of Arabidopsis thaliana chloroplasts. DOI: 10.1074/mcp.M500180-MCP200 ; PMID: 16207701
- Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. DOI: 10.1021/pr1009433 ; PMID: 21166475
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
Homologs
- Lactuca sativa Lsat_1_v5_gn_4_110861
Sequences
cDNA Sequence
- >AT3G22960.1
CAAATACAAATATTCCAAATATAACCTCTCTCCCAAAGTCCTATCATATCAGAAAAAAAAAAAAAAATCCAAATTCAACACTCTCACACTTCGATATCTCCGCCTTCATTCTCCTCAGAGCCAACTGTCCTGAGATTTCGATTTCGATTTCTCCGATCTCTCTTCCTCCGTCGCCGGCGAAACCATGTCTCAGTCTATTCAATTCTCCACTCCTTCACACACTCCTCACCTTCTCCATCTCCCTCACTCACAATTCAACCGTCCTCTCTCCTCTATCTCCTTCCGTCGCTTCCCTCTAACAACCATCAAATACACTTCCATCAGAGCCTCCTCGTCATCATCTCCTTCACCGGATCTCGATTCATCGTCCTCATCATCATCCTCGCAAGTACTTCTCTCACCTAACGGTACTGGTGCTGTGAAGTCTGATGAGAGATCCGTTGTCGCTACGGCGGTTACGACTGATACGTCTGGGATTGAGGTTGATACTGTGACGGAAGCTGAGCTTAAGGAGAATGGATTTAGAAGTACGAGGAGGACGAAGCTGATCTGTACGATCGGACCGGCGACTTGTGGATTTGAGCAGCTTGAGGCGCTTGCTGTGGGAGGTATGAATGTGGCAAGGCTTAATATGTGTCACGGTACGCGTGATTGGCACCGCGGTGTGATTCGTAGTGTTCGGAGGCTTAATGAGGAGAAAGGCTTTGCGGTTGCTATTATGATGGATACTGAAGGTAGTGAGATTCATATGGGAGATCTTGGTGGTGAAGCTTCAGCTAAAGCAGAGGATGGTGAGGTTTGGACTTTCACTGTTAGAGCTTTTGATTCTTCTCGTCCTGAACGTACCATTAGTGTTAGCTACGATGGTTTCGCTGAAGATGTAAGAGTTGGGGATGAACTTTTGGTTGATGGTGGGATGGTGAGATTTGAAGTGATTGAGAAGATTGGTCCTGATGTTAAGTGTCTATGTACCGATCCTGGATTGTTGCTTCCTCGAGCTAACTTGACGTTTTGGAGAGATGGAAGTCTTGTACGAGAGCGTAATGCCATGCTTCCAACAATTTCTTCCAAGGACTGGTTGGATATTGATTTTGGAATTGCTGAAGGTGTGGATTTCATTGCTGTATCGTTTGTCAAGTCGGCTGAAGTCATTAATCACCTTAAAAGTTATCTTGCTGCTCGTTCCCGTGGAGGGGAAATTGGAGTGATTGCAAAGATCGAGAGTATCGATTCACTGACCAATTTGGAAGAAATTATTCTAGCATCAGATGGGGCCATGGTTGCAAGAGGAGATCTGGGAGCTCAGATACCTCTTGAGCAAGTTCCAGCAGCTCAACAGAGAATCGTCCAAGTATGCAGAGCTCTTAACAAACCCGTCATTGTCGCTTCACAGCTATTGGAGTCCATGATTGAGTACCCAACTCCAACCAGAGCAGAAGTTGCCGACGTGTCTGAAGCAGTAAGACAAAGATCAGATGCATTGATGCTCTCTGGAGAATCAGCTATGGGACAATTCCCAGACAAGGCGCTCACGGTTCTAAGGACTGTCAGTTTAAGAATCGAGAGATGGTGGAGGGAAGAGAAACGCCATGAGTCTGTACCGCTTCAAGCCATAGGCTCTTCATTTTCAGACAAAATCTCAGAAGAGATCTGTAACTCAGCTGCTAAAATGGCTAACAATCTTGGAGTGGACGCGGTTTTCGTTTACACAACGAGCGGACACATGGCATCACTGGTCTCCCGATGTCGCCCGGACTGCCCGATCTTTGCTTTCACAACCACAACCTCAGTGAGAAGACGCTTAAACCTACAATGGGGACTTATCCCATTCCGTCTCAGCTTCTCAGACGACATGGAAAGCAACTTGAACAAAACATTCTCGTTACTGAAATCAAGAGGTATGATCAAATCTGGTGACCTCGTGATCGCAGTCTCGGACATGCTGCAATCAATCCAGGTAATGAACGTCCCGTAATTCTCTCTCTTTATACAATTTCGCAATCCCGCAAAAGAGTGTTTTGTTTCCTACTTTTGTTACTGTTTTTAGACTACTCTTACATTAGATTCCAGAGGCATCATCATCTTCGGTTTGTTAACAACAGTAATGTGTAAGCTTTGTTTGTAGTGTGTACTGTTTGTTTTTGGTTTTCAATAATATCAGTAATCTTATTCAAATATTCGATTCTATCATTTAGTCCTTTTGTTTTATCTTTTTGTTAGGATATATATGTAAACCCAAATAGGATGAGTTCGAAT
CDS Sequence
- >AT3G22960.1
ATGTCTCAGTCTATTCAATTCTCCACTCCTTCACACACTCCTCACCTTCTCCATCTCCCTCACTCACAATTCAACCGTCCTCTCTCCTCTATCTCCTTCCGTCGCTTCCCTCTAACAACCATCAAATACACTTCCATCAGAGCCTCCTCGTCATCATCTCCTTCACCGGATCTCGATTCATCGTCCTCATCATCATCCTCGCAAGTACTTCTCTCACCTAACGGTACTGGTGCTGTGAAGTCTGATGAGAGATCCGTTGTCGCTACGGCGGTTACGACTGATACGTCTGGGATTGAGGTTGATACTGTGACGGAAGCTGAGCTTAAGGAGAATGGATTTAGAAGTACGAGGAGGACGAAGCTGATCTGTACGATCGGACCGGCGACTTGTGGATTTGAGCAGCTTGAGGCGCTTGCTGTGGGAGGTATGAATGTGGCAAGGCTTAATATGTGTCACGGTACGCGTGATTGGCACCGCGGTGTGATTCGTAGTGTTCGGAGGCTTAATGAGGAGAAAGGCTTTGCGGTTGCTATTATGATGGATACTGAAGGTAGTGAGATTCATATGGGAGATCTTGGTGGTGAAGCTTCAGCTAAAGCAGAGGATGGTGAGGTTTGGACTTTCACTGTTAGAGCTTTTGATTCTTCTCGTCCTGAACGTACCATTAGTGTTAGCTACGATGGTTTCGCTGAAGATGTAAGAGTTGGGGATGAACTTTTGGTTGATGGTGGGATGGTGAGATTTGAAGTGATTGAGAAGATTGGTCCTGATGTTAAGTGTCTATGTACCGATCCTGGATTGTTGCTTCCTCGAGCTAACTTGACGTTTTGGAGAGATGGAAGTCTTGTACGAGAGCGTAATGCCATGCTTCCAACAATTTCTTCCAAGGACTGGTTGGATATTGATTTTGGAATTGCTGAAGGTGTGGATTTCATTGCTGTATCGTTTGTCAAGTCGGCTGAAGTCATTAATCACCTTAAAAGTTATCTTGCTGCTCGTTCCCGTGGAGGGGAAATTGGAGTGATTGCAAAGATCGAGAGTATCGATTCACTGACCAATTTGGAAGAAATTATTCTAGCATCAGATGGGGCCATGGTTGCAAGAGGAGATCTGGGAGCTCAGATACCTCTTGAGCAAGTTCCAGCAGCTCAACAGAGAATCGTCCAAGTATGCAGAGCTCTTAACAAACCCGTCATTGTCGCTTCACAGCTATTGGAGTCCATGATTGAGTACCCAACTCCAACCAGAGCAGAAGTTGCCGACGTGTCTGAAGCAGTAAGACAAAGATCAGATGCATTGATGCTCTCTGGAGAATCAGCTATGGGACAATTCCCAGACAAGGCGCTCACGGTTCTAAGGACTGTCAGTTTAAGAATCGAGAGATGGTGGAGGGAAGAGAAACGCCATGAGTCTGTACCGCTTCAAGCCATAGGCTCTTCATTTTCAGACAAAATCTCAGAAGAGATCTGTAACTCAGCTGCTAAAATGGCTAACAATCTTGGAGTGGACGCGGTTTTCGTTTACACAACGAGCGGACACATGGCATCACTGGTCTCCCGATGTCGCCCGGACTGCCCGATCTTTGCTTTCACAACCACAACCTCAGTGAGAAGACGCTTAAACCTACAATGGGGACTTATCCCATTCCGTCTCAGCTTCTCAGACGACATGGAAAGCAACTTGAACAAAACATTCTCGTTACTGAAATCAAGAGGTATGATCAAATCTGGTGACCTCGTGATCGCAGTCTCGGACATGCTGCAATCAATCCAGGTAATGAACGTCCCGTAA
Protein Sequence
- >AT3G22960.1
MSQSIQFSTPSHTPHLLHLPHSQFNRPLSSISFRRFPLTTIKYTSIRASSSSSPSPDLDSSSSSSSSQVLLSPNGTGAVKSDERSVVATAVTTDTSGIEVDTVTEAELKENGFRSTRRTKLICTIGPATCGFEQLEALAVGGMNVARLNMCHGTRDWHRGVIRSVRRLNEEKGFAVAIMMDTEGSEIHMGDLGGEASAKAEDGEVWTFTVRAFDSSRPERTISVSYDGFAEDVRVGDELLVDGGMVRFEVIEKIGPDVKCLCTDPGLLLPRANLTFWRDGSLVRERNAMLPTISSKDWLDIDFGIAEGVDFIAVSFVKSAEVINHLKSYLAARSRGGEIGVIAKIESIDSLTNLEEIILASDGAMVARGDLGAQIPLEQVPAAQQRIVQVCRALNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRSDALMLSGESAMGQFPDKALTVLRTVSLRIERWWREEKRHESVPLQAIGSSFSDKISEEICNSAAKMANNLGVDAVFVYTTSGHMASLVSRCRPDCPIFAFTTTTSVRRRLNLQWGLIPFRLSFSDDMESNLNKTFSLLKSRGMIKSGDLVIAVSDMLQSIQVMNVP