Information report for AT3G22950
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
Functional Keywords
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , pollen tube cell , pollen
Literature and News
- Analysis of the small GTPase gene superfamily of Arabidopsis. DOI: 10.1104/pp.013052 ; PMID: 12644670
- Unexpected protein families including cell defense components feature in the N-myristoylome of a higher eukaryote. DOI: 10.1074/jbc.M307321200 ; PMID: 12912986
- Genes encoding ADP-ribosylation factors in Arabidopsis thaliana L. Heyn.; genome analysis and antisense suppression. DOI: 10.1093/jxb/eri099 ; PMID: 15723828
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- and microtubule-associated compartments in the plant vacuolar trafficking pathway. DOI: 10.1073/pnas.1919820117 ; PMID: 32321832
- Unexpected protein families including cell defense components feature in the N-myristoylome of a higher eukaryote. DOI: 10.1074/jbc.M307321200 ; PMID: 12912986
Gene Resources
- UniProt: Q9LIK1
- EMBL: AP001300, AY063958, AY086337
- AlphaFoldDB: Q9LIK1
- EnsemblPlants: AT3G22950.1, AT3G22950.2
- Gramene: AT3G22950.1, AT3G22950.2
- KEGG: ath:AT3G22950
- Orthologous matrix: FTCWDLG
- ExpressionAtlas: AT3G22950
Homologs
- Actinidia chinensis Achn273391
- Cicer arietinum Ca_00017
- Citrullus lanatus Cla97C01G005310
- Daucus carota DCAR_006660
- Lupinus albus Lalb_Chr04g0259661
- Malus domestica MDP0000180376
- Oryza sativa OsSar1b, OsSar1c, OsSar1a, OsSar1d, RGP1
- Raphanus raphanistrum RrC3821_p1
- Sesamum indicum SIN_1023555
- Solanum lycopersicum Solyc02g064640.3, Solyc04g012180.3
Sequences
cDNA Sequence
- >AT3G22950.2
CGTCTTTGGCGTCGTGGCTAATGGCGGTGACGTGTTCGGTGCCATTACGGTAGAGGCTGCAGCCGTTTGGTTTTGACATTGTTTCCCGCATACTTTTCTTCTTCTTCTTCTCTCCACCCATCTGCTTTAAGGAAGGAACCTCAAAAGCTTACAAAATAGTAGAAGAAGAACTTTTTTTGATCTCCGATTCTTACCTCTGCAATCTTCAGATTCTAGCTGATTCAAGAAATTGGAGGAGATGGGAGCATTCATGTCGAGGTTTTGGTTCATGATGTTTCCTGCAAAAGAGTATAAGATTGTTGTTGTTGGTTTGGATAATGCTGGTAAAACGACGACGCTTTATAAACTTCATTTGGGTGAAGTTGTTACTACTCATCCTACTGTTGGTAGCAATGTTGAAGAGCTTGTCTACAAGAATATTCGCTTTGAGGTATGGGATCTTGGTGGGCAAGATAGGCTAAGAACTTCATGGGCAACATACTATCGTGGAACACATGCTGTGATTGTGGTTATAGATAGCACAGACAGAGCCAGAATCTCTTTCATGAAAGATGAGCTAGCCAGGTTACTTGGTCATGAGGATCTTCAAAACTCGGTCATACTAGTTTTTGCAAACAAACAGGATCTGAAAGACGCAATGACTCCTGCTGAGATCACGGATGCACTTAACCTTCACAGTATCAAGAACCATGATTGGCATATTCAAGCAAGTTGTGCGGTTACTGGAGAAGGATTGTATGATGGGCTCGGTTGGATTGCCCAAAAAGTTACCGGTAAAGCCACGAGTTAAGGGGAAACCAGAACTGAATCAGAGAGAGTACGTACTATTCTTCTTTGTTTCTTTTGTCTCCTTCATATGTTCTTTAACATTGTATCCTCTTGACTTTTATGTAACAAGCTTCAACTATTTTGGTTGCTCTCATTGAAACTGTGTCCAGAATTTTCATATATGGAAGAAAAAAATCTTGTTTTG - >AT3G22950.1
CGTCTTTGGCGTCGTGGCTAATGGCGGTGACGTGTTCGGTGCCATTACGGTAGAGGCTGCAGCCGTTTGGTTTTGACATTGTTTCCCGCATACTTTTCTTCTTCTTCTTCTCTCCACCCATCTGCTTTAAGGAAGGAACCTCAAAAGCTTACAAAATAGTAGAAGAAGAACTTTTTTTGATCTCCGATTCTTACCTCTGCAATCTTCAGATTCTAGCTGATTCAAGAAATTGGAGGAGATGGGAGCATTCATGTCGAGGTTTTGGTTCATGATGTTTCCTGCAAAAGAGTATAAGATTGTTGTTGTTGGTTTGGATAATGCTGGTAAAACGACGACGCTTTATAAACTTCATTTGGGTGAAGTTGTTACTACTCATCCTACTGTTGGTAGCAATGTTGAAGAGCTTGTCTACAAGAATATTCGCTTTGAGGTATGGGATCTTGGTGGGCAAGATAGGCTAAGAACTTCATGGGCAACATACTATCGTGGAACACATGCTGTGATTGTGGTTATAGATAGCACAGACAGAGCCAGAATCTCTTTCATGAAAGATGAGCTAGCCAGGTTACTTGGTCATGAGGATCTTCAAAACTCGGTCATACTAGTTTTTGCAAACAAACAGGATCTGAAAGACGCAATGACTCCTGCTGAGATCACGGATGCACTTAACCTTCACAGTATCAAGAACCATGATTGGCATATTCAAGCAAGTTGTGCGGTTACTGGAGAAGGATTGTATGATGGGCTCGGTTGGATTGCCCAAAAAGTTACCGGTAAAGCCACGAGTTAAGGGGAAACCAGAACTGAATCAGAGAGAGTACGTACTATTCTTCTTTGTTTCTTTTGTCTCCTTCATATGTTCTTTAACATTGTATCCTCTTGACTTTTATGTAACAAGCTTCAACTATTTTGGTTGCTCTCATTGAAACTGTGTCCAGAATTTTCATATATGGAAGAAAAAAATCTTGTTTTG
CDS Sequence
- >AT3G22950.2
ATGGGAGCATTCATGTCGAGGTTTTGGTTCATGATGTTTCCTGCAAAAGAGTATAAGATTGTTGTTGTTGGTTTGGATAATGCTGGTAAAACGACGACGCTTTATAAACTTCATTTGGGTGAAGTTGTTACTACTCATCCTACTGTTGGTAGCAATGTTGAAGAGCTTGTCTACAAGAATATTCGCTTTGAGGTATGGGATCTTGGTGGGCAAGATAGGCTAAGAACTTCATGGGCAACATACTATCGTGGAACACATGCTGTGATTGTGGTTATAGATAGCACAGACAGAGCCAGAATCTCTTTCATGAAAGATGAGCTAGCCAGGTTACTTGGTCATGAGGATCTTCAAAACTCGGTCATACTAGTTTTTGCAAACAAACAGGATCTGAAAGACGCAATGACTCCTGCTGAGATCACGGATGCACTTAACCTTCACAGTATCAAGAACCATGATTGGCATATTCAAGCAAGTTGTGCGGTTACTGGAGAAGGATTGTATGATGGGCTCGGTTGGATTGCCCAAAAAGTTACCGGTAAAGCCACGAGTTAA - >AT3G22950.1
ATGGGAGCATTCATGTCGAGGTTTTGGTTCATGATGTTTCCTGCAAAAGAGTATAAGATTGTTGTTGTTGGTTTGGATAATGCTGGTAAAACGACGACGCTTTATAAACTTCATTTGGGTGAAGTTGTTACTACTCATCCTACTGTTGGTAGCAATGTTGAAGAGCTTGTCTACAAGAATATTCGCTTTGAGGTATGGGATCTTGGTGGGCAAGATAGGCTAAGAACTTCATGGGCAACATACTATCGTGGAACACATGCTGTGATTGTGGTTATAGATAGCACAGACAGAGCCAGAATCTCTTTCATGAAAGATGAGCTAGCCAGGTTACTTGGTCATGAGGATCTTCAAAACTCGGTCATACTAGTTTTTGCAAACAAACAGGATCTGAAAGACGCAATGACTCCTGCTGAGATCACGGATGCACTTAACCTTCACAGTATCAAGAACCATGATTGGCATATTCAAGCAAGTTGTGCGGTTACTGGAGAAGGATTGTATGATGGGCTCGGTTGGATTGCCCAAAAAGTTACCGGTAAAGCCACGAGTTAA
Protein Sequence
- >AT3G22950.2
MGAFMSRFWFMMFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARISFMKDELARLLGHEDLQNSVILVFANKQDLKDAMTPAEITDALNLHSIKNHDWHIQASCAVTGEGLYDGLGWIAQKVTGKATS - >AT3G22950.1
MGAFMSRFWFMMFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARISFMKDELARLLGHEDLQNSVILVFANKQDLKDAMTPAEITDALNLHSIKNHDWHIQASCAVTGEGLYDGLGWIAQKVTGKATS