Gene Details:
- Gene ID: AT3G22880
- Gene Symbol: ARLIM15, ATDMC1, DMC1
- Gene Name: ARABIDOPSIS HOMOLOG OF LILY MESSAGES INDUCED AT MEIOSIS 15, ARABIDOPSIS THALIANA DISRUPTION OF MEIOTIC CONTROL 1, DISRUPTION OF MEIOTIC CONTROL 1
- Description: DNA repair (Rad51) family protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , pollen tube cell
Literature:
- Interaction between Arabidopsis Brca2 and its partners Rad51, Dmc1, and Dss1. DOI: 10.1104/pp.105.075838 ; PMID: 16415210
- ASY1 mediates AtDMC1-dependent interhomolog recombination during meiosis in Arabidopsis. DOI: 10.1101/gad.439007 ; PMID: 17785529
- ASY1 coordinates early events in the plant meiotic recombination pathway. DOI: 10.1159/000121079 ; PMID: 18504359
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- The interplay of RecA-related proteins and the MND1-HOP2 complex during meiosis in Arabidopsis thaliana. DOI: 10.1371/journal.pgen.0030176 ; PMID: 17937504
- Modulation of the poly(ADP-ribosyl)ation reaction via the Arabidopsis ADP-ribose/NADH pyrophosphohydrolase, AtNUDX7, is involved in the response to oxidative stress. DOI: 10.1104/pp.109.140442 ; PMID: 19656905
- A high throughput genetic screen identifies new early meiotic recombination functions in Arabidopsis thaliana. DOI: 10.1371/journal.pgen.1000654 ; PMID: 19763177
- The ASH1 HOMOLOG 2 (ASHH2) histone H3 methyltransferase is required for ovule and anther development in Arabidopsis. DOI: 10.1371/journal.pone.0007817 ; PMID: 19915673
- Differing requirements for RAD51 and DMC1 in meiotic pairing of centromeres and chromosome arms in Arabidopsis thaliana. DOI: 10.1371/journal.pgen.1002636 ; PMID: 22532804
- MCM8 is required for a pathway of meiotic double-strand break repair independent of DMC1 in Arabidopsis thaliana. DOI: 10.1371/journal.pgen.1003165 ; PMID: 23300481
- Sufficient amounts of functional HOP2/MND1 complex promote interhomolog DNA repair but are dispensable for intersister DNA repair during meiosis in Arabidopsis. DOI: 10.1105/tpc.113.118521 ; PMID: 24363313
- AAA-ATPase FIDGETIN-LIKE 1 and Helicase FANCM Antagonize Meiotic Crossovers by Distinct Mechanisms. DOI: 10.1371/journal.pgen.1005369 ; PMID: 26161528
- Analysis of the Relationships between DNA Double-Strand Breaks, Synaptonemal Complex and Crossovers Using the Atfas1-4 Mutant. DOI: 10.1371/journal.pgen.1005301 ; PMID: 26147458
- FIGL1 and its novel partner FLIP form a conserved complex that regulates homologous recombination. DOI: 10.1371/journal.pgen.1007317 ; PMID: 29608566
- The Application of a Meiocyte-Specific CRISPR/Cas9 (MSC) System and a Suicide-MSC System in Generating Inheritable and Stable Mutations in Arabidopsis. DOI: 10.3389/fpls.2018.01007 ; PMID: 30061908
- ATM Promotes RAD51-Mediated Meiotic DSB Repair by Inter-Sister-Chromatid Recombination in Arabidopsis. DOI: 10.3389/fpls.2020.00839 ; PMID: 32670319
- ATM controls meiotic DNA double-strand break formation and recombination and affects synaptonemal complex organization in plants. DOI: 10.1093/plcell/koab045 ; PMID: 33659989
- Comparative transcriptomic analysis of thermally stressed Arabidopsis thaliana meiotic recombination mutants. DOI: 10.1186/s12864-021-07497-2 ; PMID: 33711924
- Heat stress interferes with formation of double-strand breaks and homolog synapsis. DOI: 10.1093/plphys/kiab012 ; PMID: 33793950
- RAD54 is essential for RAD51-mediated repair of meiotic DSB in Arabidopsis. DOI: 10.1371/journal.pgen.1008919 ; PMID: 34003859
- The Arabidopsis DREAM complex antagonizes WDR5A to modulate histone H3K4me2/3 deposition for a subset of genome repression. DOI: 10.1073/pnas.2206075119 ; PMID: 35759663
Sequences:
cDNA Sequence
- >AT3G22880.1
CACAAACGAAAACAAATTCAGTTGCGGAACCCAAATTCAAATCAACGGAATTAGAATCACGCTTTCAATTCCGTAACCCGCCATTAAAAACCTTGAACCCTCGAAGCAAATCGAGCAAAGATTTTCAAATTTCGAATTTCAAAATTCTATCTCTCTCACTCTTCCAAGCTTAGAGACTCTTAGAGCGAGAAAATGATGGCTTCTCTTAAAGCTGAAGAAACGAGCCAGATGCAGCTCGTTGAGCGTGAAGAAAATGATGAAGACGAAGATCTATTTGAGATGATTGACAAATTGATCGCACAAGGTATAAACGCAGGAGATGTGAAAAAGCTACAAGAAGCTGGGATCCATACCTGCAATGGTCTCATGATGCATACCAAGAAGAACCTTACTGGAATCAAAGGTTTATCTGAGGCCAAAGTTGACAAAATCTGTGAAGCTGCTGAGAAAATTGTGAACTTTGGATATATGACTGGAAGTGATGCTCTTATAAAGAGGAAATCAGTTGTAAAAATCACTACAGGGTGTCAAGCTCTCGATGATCTCTTAGGAGGTGGAATTGAAACCTCAGCCATCACAGAGGCTTTTGGGGAATTTAGGTCTGGGAAAACCCAATTAGCACATACCCTTTGTGTCACTACGCAGCTACCTACAAACATGAAAGGAGGGAATGGAAAAGTGGCATACATTGACACAGAGGGAACCTTCCGTCCTGATAGGATTGTCCCAATTGCTGAAAGATTTGGAATGGATCCAGGAGCTGTGCTTGACAATATCATTTATGCTCGTGCTTATACCTATGAGCATCAGTACAACTTGCTTCTTGGCCTTGCTGCAAAAATGTCTGAGGAACCATTTAGGATTCTGATTGTTGACTCGATCATTGCTTTATTCCGAGTGGATTTCACTGGAAGAGGAGAACTCGCAGACCGCCAGCAAAAACTAGCTCAGATGCTTTCCAGGCTAATCAAAATTGCAGAGGAGTTCAACGTTGCTGTCTACATGACTAACCAAGTCATAGCTGACCCAGGTGGTGGAATGTTCATATCAGACCCAAAAAAGCCAGCAGGTGGTCATGTACTAGCTCACGCAGCCACCATCAGGCTCTTGTTCAGGAAAGGCAAAGGCGATACACGTGTCTGCAAAGTCTACGATGCTCCGAATCTCGCTGAAGCTGAAGCCAGTTTCCAGATTACTCAAGGAGGCATTGCTGACGCGAAGGATTAGAGGAGCGAACTCTTTTATATGTCATAATCACGAATTATGTCTGTTCTTAACTTGCTGCTTGTTTCTGCATCGAATCAGACGTTTTAATTAAGTCTTTTTATTCTTAGTTTCTTGTTTACCAAATAAGACGATCATTACTTGATTCGGCTTACAAAACCAATCTATGTATCTGATAAAGCTGCAAACAAAACAACTCTGGTTCGTTTGTAAAAAGACAATAATGGCTTTATAACAAGTAACAAGTAAAAGTTCATTATGATCATTGATTAA - >AT3G22880.2
CACAAACGAAAACAAATTCAGTTGCGGAACCCAAATTCAAATCAACGGAATTAGAATCACGCTTTCAATTCCGTAACCCGCCATTAAAAACCTTGAACCCTCGAAGCAAATCGAGCAAAGATTTTCAAATTTCGAATTTCAAAATTCTATCTCTCTCACTCTTCCAAGCTTAGAGACTCTTAGAGCGAGAAAATGATGGCTTCTCTTAAAGCTGAAGAAACGAGCCAGATGCAGCTCGTTGAGCGTGAAGAAAATGATGAAGACGAAGATCTATTTGAGATGATTGACAAATTGATCGCACAAGGTATAAACGCAGGAGATGTGAAAAAGCTACAAGAAGCTGGGATCCATACCTGCAATGGTCTCATGATGCATACCAAGAAGAACCTTACTGGAATCAAAGGTTTATCTGAGGCCAAAGTTGACAAAATCTGTGAAGCTGCTGAGAAAATTGTGAACTTTGGATATATGACTGGAAGTGATGCTCTTATAAAGAGGAAATCAGTTGTAAAAATCACTACAGGGTGTCAAGCTCTCGATGATCTCTTAGGAGGTGGAATTGAAACCTCAGCCATCACAGAGGCTTTTGGGGAATTTAGGTCTGGGAAAACCCAATTAGCACATACCCTTTGTGTCACTACGCAGCTACCTACAAACATGAAAGGAGGGAATGGAAAAGTGGCATACATTGACACAGAGGGAACCTTCCGTCCTGATAGGATTGTCCCAATTGCTGAAAGATTTGGAATGGATCCAGGAGCTGTGCTTGACAATATCATTTATGCTCGTGCTTATACCTATGAGCATCAGTACAACTTGCTTCTTGGCCTTGCTGCAAAAATGTCTGAGGAACCATTTAGGATTCTGATTGTTGACTCGATCATTGCTTTATTCCGAGTGGATTTCACTGGAAGAGGAGAACTCGCAGACCGCCAGCAAAAACTAGCTCAGATGCTTTCCAGGCTAATCAAAATTGCAGAGGAGTTCAACGTTGCTGTCTACATGACTAACCAAGTCATAGCTGACCCAGGTGGTGGAATGTTCATATCAGACCCAAAAAAGCCAGCAGGTGGTCATGTACTAGCTCACGCAGCCACCATCAGGCTCTTGTTCAGGAAAGGCAAAGGCGATACACGTGTCTGCAAAGTCTACGATGCTCCGAATCTCGCTGAAGCTGAAGCCAGTTTCCAGATTACTCAAGGAGGCATTGCTGACGCGAAGGATTAGAGGAGCGAACTCTTTTATATGTCATAATCACGAATTATGTCTGTTCTTAACTTGCTGCTTGTTTCTGCATCGAATCAGACGTTTTAATTAAGTCTTTTTATTCTTAGTTTCTTGTTTACCAAATAAGACGATCATTACTTGATTCGGCTTACAAAACCAATCTATGTATCTGATAAAGCTGCAAACAAAACAACTCTGGTTCGTTTGTAAAAAGACAATAATGGCTTTATAACAAGTAACAAGTAAAAGTTCATTATGATCATTGATTAA
CDS Sequence
- >AT3G22880.1
ATGATGGCTTCTCTTAAAGCTGAAGAAACGAGCCAGATGCAGCTCGTTGAGCGTGAAGAAAATGATGAAGACGAAGATCTATTTGAGATGATTGACAAATTGATCGCACAAGGTATAAACGCAGGAGATGTGAAAAAGCTACAAGAAGCTGGGATCCATACCTGCAATGGTCTCATGATGCATACCAAGAAGAACCTTACTGGAATCAAAGGTTTATCTGAGGCCAAAGTTGACAAAATCTGTGAAGCTGCTGAGAAAATTGTGAACTTTGGATATATGACTGGAAGTGATGCTCTTATAAAGAGGAAATCAGTTGTAAAAATCACTACAGGGTGTCAAGCTCTCGATGATCTCTTAGGAGGTGGAATTGAAACCTCAGCCATCACAGAGGCTTTTGGGGAATTTAGGTCTGGGAAAACCCAATTAGCACATACCCTTTGTGTCACTACGCAGCTACCTACAAACATGAAAGGAGGGAATGGAAAAGTGGCATACATTGACACAGAGGGAACCTTCCGTCCTGATAGGATTGTCCCAATTGCTGAAAGATTTGGAATGGATCCAGGAGCTGTGCTTGACAATATCATTTATGCTCGTGCTTATACCTATGAGCATCAGTACAACTTGCTTCTTGGCCTTGCTGCAAAAATGTCTGAGGAACCATTTAGGATTCTGATTGTTGACTCGATCATTGCTTTATTCCGAGTGGATTTCACTGGAAGAGGAGAACTCGCAGACCGCCAGCAAAAACTAGCTCAGATGCTTTCCAGGCTAATCAAAATTGCAGAGGAGTTCAACGTTGCTGTCTACATGACTAACCAAGTCATAGCTGACCCAGGTGGTGGAATGTTCATATCAGACCCAAAAAAGCCAGCAGGTGGTCATGTACTAGCTCACGCAGCCACCATCAGGCTCTTGTTCAGGAAAGGCAAAGGCGATACACGTGTCTGCAAAGTCTACGATGCTCCGAATCTCGCTGAAGCTGAAGCCAGTTTCCAGATTACTCAAGGAGGCATTGCTGACGCGAAGGATTAG - >AT3G22880.2
ATGATGGCTTCTCTTAAAGCTGAAGAAACGAGCCAGATGCAGCTCGTTGAGCGTGAAGAAAATGATGAAGACGAAGATCTATTTGAGATGATTGACAAATTGATCGCACAAGGTATAAACGCAGGAGATGTGAAAAAGCTACAAGAAGCTGGGATCCATACCTGCAATGGTCTCATGATGCATACCAAGAAGAACCTTACTGGAATCAAAGGTTTATCTGAGGCCAAAGTTGACAAAATCTGTGAAGCTGCTGAGAAAATTGTGAACTTTGGATATATGACTGGAAGTGATGCTCTTATAAAGAGGAAATCAGTTGTAAAAATCACTACAGGGTGTCAAGCTCTCGATGATCTCTTAGGAGGTGGAATTGAAACCTCAGCCATCACAGAGGCTTTTGGGGAATTTAGGTCTGGGAAAACCCAATTAGCACATACCCTTTGTGTCACTACGCAGCTACCTACAAACATGAAAGGAGGGAATGGAAAAGTGGCATACATTGACACAGAGGGAACCTTCCGTCCTGATAGGATTGTCCCAATTGCTGAAAGATTTGGAATGGATCCAGGAGCTGTGCTTGACAATATCATTTATGCTCGTGCTTATACCTATGAGCATCAGTACAACTTGCTTCTTGGCCTTGCTGCAAAAATGTCTGAGGAACCATTTAGGATTCTGATTGTTGACTCGATCATTGCTTTATTCCGAGTGGATTTCACTGGAAGAGGAGAACTCGCAGACCGCCAGCAAAAACTAGCTCAGATGCTTTCCAGGCTAATCAAAATTGCAGAGGAGTTCAACGTTGCTGTCTACATGACTAACCAAGTCATAGCTGACCCAGGTGGTGGAATGTTCATATCAGACCCAAAAAAGCCAGCAGGTGGTCATGTACTAGCTCACGCAGCCACCATCAGGCTCTTGTTCAGGAAAGGCAAAGGCGATACACGTGTCTGCAAAGTCTACGATGCTCCGAATCTCGCTGAAGCTGAAGCCAGTTTCCAGATTACTCAAGGAGGCATTGCTGACGCGAAGGATTAG
Protein Sequence
- >AT3G22880.1
MMASLKAEETSQMQLVEREENDEDEDLFEMIDKLIAQGINAGDVKKLQEAGIHTCNGLMMHTKKNLTGIKGLSEAKVDKICEAAEKIVNFGYMTGSDALIKRKSVVKITTGCQALDDLLGGGIETSAITEAFGEFRSGKTQLAHTLCVTTQLPTNMKGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRILIVDSIIALFRVDFTGRGELADRQQKLAQMLSRLIKIAEEFNVAVYMTNQVIADPGGGMFISDPKKPAGGHVLAHAATIRLLFRKGKGDTRVCKVYDAPNLAEAEASFQITQGGIADAKD - >AT3G22880.2
MMASLKAEETSQMQLVEREENDEDEDLFEMIDKLIAQGINAGDVKKLQEAGIHTCNGLMMHTKKNLTGIKGLSEAKVDKICEAAEKIVNFGYMTGSDALIKRKSVVKITTGCQALDDLLGGGIETSAITEAFGEFRSGKTQLAHTLCVTTQLPTNMKGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRILIVDSIIALFRVDFTGRGELADRQQKLAQMLSRLIKIAEEFNVAVYMTNQVIADPGGGMFISDPKKPAGGHVLAHAATIRLLFRKGKGDTRVCKVYDAPNLAEAEASFQITQGGIADAKD