Gene Details:
- Gene ID: AT3G22780
- Gene Symbol: ATTSO1, TSO1
- Gene Name: CHINESE FOR UGLY
- Description: Tesmin/TSO1-like CXC domain-containing protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- SHORT INTEGUMENTS 2 promotes growth during Arabidopsis reproductive development. DOI: 10.1093/genetics/155.2.899 ; PMID: 10835408
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- An Arabidopsis gene regulatory network for secondary cell wall synthesis. DOI: 10.1038/nature14099 ; PMID: 25533953
- Exploring potential new floral organ morphogenesis genes of Arabidopsis thaliana using systems biology approach. DOI: 10.3389/fpls.2015.00829 ; PMID: 26528302
- The DREAM complex represses growth in response to DNA damage in Arabidopsis. DOI: 10.26508/lsa.202101141 ; PMID: 34583930
- Cyclin A participates in the TSO1-MYB3R1 regulatory module to maintain shoot meristem size and fertility in Arabidopsis. DOI: 10.1242/dev.201405 ; PMID: 36805640
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- The conserved cysteine-rich domain of a tesmin/TSO1-like protein binds zinc in vitro and TSO1 is required for both male and female fertility in Arabidopsis thaliana. DOI: 10.1093/jxb/erm215 ; PMID: 18057042
Sequences:
cDNA Sequence
- >AT3G22780.1
ACACTGTTTCGCACCGGCGCGGACAAAGTTTTTTTTTTGTTCGAAATCCGACAACAACCCTAGATTATAAACAAAATAAACCAGTGTCTGCATAGAGGCAATGTAGATGTGATTTTTGCTGGAAAATGGACAAATCCCAGAAGAATCCTACTTCCCAGATCGGAACTTCAACTCCCAAATCCAAATTCGAGGATTCTCCAGTGTTCAACTACATAAGCAACCTCTCTCCAATTGAGTCGGTCAAATCTATCTCCACTGCTCAAACGTTTAGCTCTCTTAGTTTCACATCTCCTCCTCCTGTGTTTACTTCTCCTCACGTCATTTCTCACAGAGAATCCAGATTCTTCAGATGTCATAACTCTGTTGATCGTTCAAAGCACTTAGAATCTTTAGATGGATCTGCTGTTAAAGGAGAAGTTGTAGTACCATTAGTTGAAGATCTAAATAAAGAAGCTTCTTTGGAAGATGAAGAAGAAACTTCTGTTGAAACGTCTTCTGAGCTGCCACAGATCATGAAGTTCGATAGCCAAACTTCTGAGCATAGTGATTCACCTTGCACTGAAGATGTTGTTATTGAAGCTTCATCTGATCCTCCTCGAGGAGACAATGGTTCGTCATCCGAGGATGTCACGATGGGACTTCAGAATATGCTTGTTGTTCGGGAAGGGAATGACACTCCTGGTTGTGGACGTTTGATCTCAGATGCAACTGAGCTGTTAGTATTTCGATCTCCGAATGATTCTGAGGCTTTTAGATGCTTGGTCGATAAAATATCAAGCTCAGAAAGACGGTTCTGTGCTGGTGTCAAGTCTACAAAGCGGCCTGATATCAACAAAGATATTCCAGCCAATGGATCTAGTAATGAAAATCAGCCTTTGGCTGTGCTTCCTACAAACGAGTCTGTCTTTAACTTGCATCGTGGTGGCATGCGAAGACGCTGCCTTGACTTTGAGATGCCAGGGAAACGGAAGAAGGATATTGTTGATGATCAGCAATCTGTGTGTGACAATAATGTGGCTGGTGAATCTTCCTCGAGCTGTGTTGTACCTGGTATTGGTCTTCATCTAAACGCCGTTGCAATGTCTGCAAAGGACAGTAACATCAGTGTCATACATGGCTATTCCATATCTGGAGAGATTCAAAAGAGTTTCTCAGGCTCTACCACTCCAATTCAGTCCCAAGACACTGTGCAAGAAACTTCGGACCAGGCAGAAAACGAACCTGTAGAAGAAGTTCCCAAAGCATTGGTGTTCCCAGAGTTGAATCTAGGCAGCCTTAAGAAAAAGATGCGTAAATCTGAACAAGCTGGGGAGGGTGAGTCATGTAAACGATGCAACTGCAAAAAGTCTAAGTGTTTGAAGCTTTACTGTGAATGCTTTGCTGCTGGGGTTTATTGCATAGAGCCATGTTCATGTATAGATTGCTTCAACAAACCTATCCATGAAGAAACTGTTTTGGCTACCCGCAAACAGATTGAATCCCGAAATCCACTTGCATTTGCTCCTAAAGTCATCAGAAATGCAGATTCCATCATGGAAGCTAGTGATGATGCCAGTAAAACCCCGGCTTCTGCACGACACAAACGTGGCTGCAACTGCAAGAAATCAAACTGTATGAAGAAATACTGTGAATGCTATCAGGGTGGAGTCGGCTGTTCCATGAACTGTAGATGCGAAGGATGCACAAATGTATTCGGCAGAAAAGATGGGTCTTTACTTGTTATCATGGAAAGCAAACTAGAGGAGAATCAGGAGACATATGAGAAAAGAATAGCAAAAATCCAACACAACGTCGAGGTGTCGAAAGAAGTGGAGCAGAACCCAAGTTCTGATCAACCTTCGACACCACTGCCACCGTACAGACATTTGGTGGTTCATCAGCCATTCTTGTCTAAGAACAGACTGCCTCCGACACAGTTTTTTCTTGGCACAGGTTCTTCCTCTTTCAGAAAACCAAACAGTGATTTGGCGCAATCACAGAATGAGAAGAAGCCTCTTGAAACTGTGACTGAGGACAAAACAGAGATTATGCCTGAGATTCTCCTCAATTCCCCTATAGCTAACATCAAGGCCATCTCTCCCAACAGCAAGAGAGTCTCTCCCCCTCAACCCGGCTCCTCGGAGTCAGGCTCAATCCTAAGGAGAAGAGGTAATGGCCGGAAGCTGATACTACGGTCTATTCCAGCATTTCCTTCTCTCAACCCAAATCAGTGAATCAAAAACAATTTGGTTAAGCTATGGAAAAATTCTTTGTATCTTTGTAATGTTCCAGATCCTATTAGCCTATCATTGTTTCCATAACATAAGGCATAAGCAACGTTATTGTAAGATACTTTATTCTAGTAGTAGTAGGTAATGTAATAGTACATTCTAGTTCATAATCTTCCAGAAAGAACGTCCTAAACTGGACTTTGAGAAAAGCTAAGTTCGAAACATAGAGTCAAACCAGATACATACAGTTTAGCAGAAACTACAAAGATTACTCATTTCATTTGCTCTAATATTTCAGAAACCATGCAACAAAATACTTCTAGAGTCAGTACCATGATTATATAGTGAAAAATAAATAGTAAGCTTGATGCTGTTACGTTAGAATCCACCCTACTCTTCATTACCGGAAGATCTCATACAGCCGCAGAAACGATTTTTCTTCTTTCTCG
CDS Sequence
- >AT3G22780.1
ATGGACAAATCCCAGAAGAATCCTACTTCCCAGATCGGAACTTCAACTCCCAAATCCAAATTCGAGGATTCTCCAGTGTTCAACTACATAAGCAACCTCTCTCCAATTGAGTCGGTCAAATCTATCTCCACTGCTCAAACGTTTAGCTCTCTTAGTTTCACATCTCCTCCTCCTGTGTTTACTTCTCCTCACGTCATTTCTCACAGAGAATCCAGATTCTTCAGATGTCATAACTCTGTTGATCGTTCAAAGCACTTAGAATCTTTAGATGGATCTGCTGTTAAAGGAGAAGTTGTAGTACCATTAGTTGAAGATCTAAATAAAGAAGCTTCTTTGGAAGATGAAGAAGAAACTTCTGTTGAAACGTCTTCTGAGCTGCCACAGATCATGAAGTTCGATAGCCAAACTTCTGAGCATAGTGATTCACCTTGCACTGAAGATGTTGTTATTGAAGCTTCATCTGATCCTCCTCGAGGAGACAATGGTTCGTCATCCGAGGATGTCACGATGGGACTTCAGAATATGCTTGTTGTTCGGGAAGGGAATGACACTCCTGGTTGTGGACGTTTGATCTCAGATGCAACTGAGCTGTTAGTATTTCGATCTCCGAATGATTCTGAGGCTTTTAGATGCTTGGTCGATAAAATATCAAGCTCAGAAAGACGGTTCTGTGCTGGTGTCAAGTCTACAAAGCGGCCTGATATCAACAAAGATATTCCAGCCAATGGATCTAGTAATGAAAATCAGCCTTTGGCTGTGCTTCCTACAAACGAGTCTGTCTTTAACTTGCATCGTGGTGGCATGCGAAGACGCTGCCTTGACTTTGAGATGCCAGGGAAACGGAAGAAGGATATTGTTGATGATCAGCAATCTGTGTGTGACAATAATGTGGCTGGTGAATCTTCCTCGAGCTGTGTTGTACCTGGTATTGGTCTTCATCTAAACGCCGTTGCAATGTCTGCAAAGGACAGTAACATCAGTGTCATACATGGCTATTCCATATCTGGAGAGATTCAAAAGAGTTTCTCAGGCTCTACCACTCCAATTCAGTCCCAAGACACTGTGCAAGAAACTTCGGACCAGGCAGAAAACGAACCTGTAGAAGAAGTTCCCAAAGCATTGGTGTTCCCAGAGTTGAATCTAGGCAGCCTTAAGAAAAAGATGCGTAAATCTGAACAAGCTGGGGAGGGTGAGTCATGTAAACGATGCAACTGCAAAAAGTCTAAGTGTTTGAAGCTTTACTGTGAATGCTTTGCTGCTGGGGTTTATTGCATAGAGCCATGTTCATGTATAGATTGCTTCAACAAACCTATCCATGAAGAAACTGTTTTGGCTACCCGCAAACAGATTGAATCCCGAAATCCACTTGCATTTGCTCCTAAAGTCATCAGAAATGCAGATTCCATCATGGAAGCTAGTGATGATGCCAGTAAAACCCCGGCTTCTGCACGACACAAACGTGGCTGCAACTGCAAGAAATCAAACTGTATGAAGAAATACTGTGAATGCTATCAGGGTGGAGTCGGCTGTTCCATGAACTGTAGATGCGAAGGATGCACAAATGTATTCGGCAGAAAAGATGGGTCTTTACTTGTTATCATGGAAAGCAAACTAGAGGAGAATCAGGAGACATATGAGAAAAGAATAGCAAAAATCCAACACAACGTCGAGGTGTCGAAAGAAGTGGAGCAGAACCCAAGTTCTGATCAACCTTCGACACCACTGCCACCGTACAGACATTTGGTGGTTCATCAGCCATTCTTGTCTAAGAACAGACTGCCTCCGACACAGTTTTTTCTTGGCACAGGTTCTTCCTCTTTCAGAAAACCAAACAGTGATTTGGCGCAATCACAGAATGAGAAGAAGCCTCTTGAAACTGTGACTGAGGACAAAACAGAGATTATGCCTGAGATTCTCCTCAATTCCCCTATAGCTAACATCAAGGCCATCTCTCCCAACAGCAAGAGAGTCTCTCCCCCTCAACCCGGCTCCTCGGAGTCAGGCTCAATCCTAAGGAGAAGAGGTAATGGCCGGAAGCTGATACTACGGTCTATTCCAGCATTTCCTTCTCTCAACCCAAATCAGTGA
Protein Sequence
- >AT3G22780.1
MDKSQKNPTSQIGTSTPKSKFEDSPVFNYISNLSPIESVKSISTAQTFSSLSFTSPPPVFTSPHVISHRESRFFRCHNSVDRSKHLESLDGSAVKGEVVVPLVEDLNKEASLEDEEETSVETSSELPQIMKFDSQTSEHSDSPCTEDVVIEASSDPPRGDNGSSSEDVTMGLQNMLVVREGNDTPGCGRLISDATELLVFRSPNDSEAFRCLVDKISSSERRFCAGVKSTKRPDINKDIPANGSSNENQPLAVLPTNESVFNLHRGGMRRRCLDFEMPGKRKKDIVDDQQSVCDNNVAGESSSSCVVPGIGLHLNAVAMSAKDSNISVIHGYSISGEIQKSFSGSTTPIQSQDTVQETSDQAENEPVEEVPKALVFPELNLGSLKKKMRKSEQAGEGESCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCIDCFNKPIHEETVLATRKQIESRNPLAFAPKVIRNADSIMEASDDASKTPASARHKRGCNCKKSNCMKKYCECYQGGVGCSMNCRCEGCTNVFGRKDGSLLVIMESKLEENQETYEKRIAKIQHNVEVSKEVEQNPSSDQPSTPLPPYRHLVVHQPFLSKNRLPPTQFFLGTGSSSFRKPNSDLAQSQNEKKPLETVTEDKTEIMPEILLNSPIANIKAISPNSKRVSPPQPGSSESGSILRRRGNGRKLILRSIPAFPSLNPNQ