Information report for AT3G22780
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
Literature and News
- SHORT INTEGUMENTS 2 promotes growth during Arabidopsis reproductive development. DOI: 10.1093/genetics/155.2.899 ; PMID: 10835408
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- An Arabidopsis gene regulatory network for secondary cell wall synthesis. DOI: 10.1038/nature14099 ; PMID: 25533953
- Exploring potential new floral organ morphogenesis genes of Arabidopsis thaliana using systems biology approach. DOI: 10.3389/fpls.2015.00829 ; PMID: 26528302
- The DREAM complex represses growth in response to DNA damage in Arabidopsis. DOI: 10.26508/lsa.202101141 ; PMID: 34583930
- Cyclin A participates in the TSO1-MYB3R1 regulatory module to maintain shoot meristem size and fertility in Arabidopsis. DOI: 10.1242/dev.201405 ; PMID: 36805640
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- The conserved cysteine-rich domain of a tesmin/TSO1-like protein binds zinc in vitro and TSO1 is required for both male and female fertility in Arabidopsis thaliana. DOI: 10.1093/jxb/erm215 ; PMID: 18057042
Gene Resources
- UniProt: A0A654F9R9
- EMBL: CACRSJ010000106
- AlphaFoldDB: A0A654F9R9
- EnsemblPlants: AT3G22780.1
- Gramene: AT3G22780.1
- KEGG: ath:AT3G22780
- Orthologous matrix: CHNSVDR
- ExpressionAtlas: AT3G22780
- InterPro: IPR005172, IPR033467, IPR044522
- PANTHER: PTHR46159, PTHR46159:SF13
- PROSITE: PS51634
- SWISS-MODEL: A0A654F9R9
Homologs
- Brassica napus GSBRNA2T00014688001, GSBRNA2T00048431001, GSBRNA2T00158450001, GSBRNA2T00154828001
- Brassica oleracea XP_013587689.1, XP_013622497.1, XP_013622498.1, XP_013622499.1
- Brassica rapa XP_009145268.1, XP_009135824.1, XP_009135825.1
- Raphanus raphanistrum RrC2359_p2, RrC9163_p2
Sequences
cDNA Sequence
- >AT3G22780.1
ACACTGTTTCGCACCGGCGCGGACAAAGTTTTTTTTTTGTTCGAAATCCGACAACAACCCTAGATTATAAACAAAATAAACCAGTGTCTGCATAGAGGCAATGTAGATGTGATTTTTGCTGGAAAATGGACAAATCCCAGAAGAATCCTACTTCCCAGATCGGAACTTCAACTCCCAAATCCAAATTCGAGGATTCTCCAGTGTTCAACTACATAAGCAACCTCTCTCCAATTGAGTCGGTCAAATCTATCTCCACTGCTCAAACGTTTAGCTCTCTTAGTTTCACATCTCCTCCTCCTGTGTTTACTTCTCCTCACGTCATTTCTCACAGAGAATCCAGATTCTTCAGATGTCATAACTCTGTTGATCGTTCAAAGCACTTAGAATCTTTAGATGGATCTGCTGTTAAAGGAGAAGTTGTAGTACCATTAGTTGAAGATCTAAATAAAGAAGCTTCTTTGGAAGATGAAGAAGAAACTTCTGTTGAAACGTCTTCTGAGCTGCCACAGATCATGAAGTTCGATAGCCAAACTTCTGAGCATAGTGATTCACCTTGCACTGAAGATGTTGTTATTGAAGCTTCATCTGATCCTCCTCGAGGAGACAATGGTTCGTCATCCGAGGATGTCACGATGGGACTTCAGAATATGCTTGTTGTTCGGGAAGGGAATGACACTCCTGGTTGTGGACGTTTGATCTCAGATGCAACTGAGCTGTTAGTATTTCGATCTCCGAATGATTCTGAGGCTTTTAGATGCTTGGTCGATAAAATATCAAGCTCAGAAAGACGGTTCTGTGCTGGTGTCAAGTCTACAAAGCGGCCTGATATCAACAAAGATATTCCAGCCAATGGATCTAGTAATGAAAATCAGCCTTTGGCTGTGCTTCCTACAAACGAGTCTGTCTTTAACTTGCATCGTGGTGGCATGCGAAGACGCTGCCTTGACTTTGAGATGCCAGGGAAACGGAAGAAGGATATTGTTGATGATCAGCAATCTGTGTGTGACAATAATGTGGCTGGTGAATCTTCCTCGAGCTGTGTTGTACCTGGTATTGGTCTTCATCTAAACGCCGTTGCAATGTCTGCAAAGGACAGTAACATCAGTGTCATACATGGCTATTCCATATCTGGAGAGATTCAAAAGAGTTTCTCAGGCTCTACCACTCCAATTCAGTCCCAAGACACTGTGCAAGAAACTTCGGACCAGGCAGAAAACGAACCTGTAGAAGAAGTTCCCAAAGCATTGGTGTTCCCAGAGTTGAATCTAGGCAGCCTTAAGAAAAAGATGCGTAAATCTGAACAAGCTGGGGAGGGTGAGTCATGTAAACGATGCAACTGCAAAAAGTCTAAGTGTTTGAAGCTTTACTGTGAATGCTTTGCTGCTGGGGTTTATTGCATAGAGCCATGTTCATGTATAGATTGCTTCAACAAACCTATCCATGAAGAAACTGTTTTGGCTACCCGCAAACAGATTGAATCCCGAAATCCACTTGCATTTGCTCCTAAAGTCATCAGAAATGCAGATTCCATCATGGAAGCTAGTGATGATGCCAGTAAAACCCCGGCTTCTGCACGACACAAACGTGGCTGCAACTGCAAGAAATCAAACTGTATGAAGAAATACTGTGAATGCTATCAGGGTGGAGTCGGCTGTTCCATGAACTGTAGATGCGAAGGATGCACAAATGTATTCGGCAGAAAAGATGGGTCTTTACTTGTTATCATGGAAAGCAAACTAGAGGAGAATCAGGAGACATATGAGAAAAGAATAGCAAAAATCCAACACAACGTCGAGGTGTCGAAAGAAGTGGAGCAGAACCCAAGTTCTGATCAACCTTCGACACCACTGCCACCGTACAGACATTTGGTGGTTCATCAGCCATTCTTGTCTAAGAACAGACTGCCTCCGACACAGTTTTTTCTTGGCACAGGTTCTTCCTCTTTCAGAAAACCAAACAGTGATTTGGCGCAATCACAGAATGAGAAGAAGCCTCTTGAAACTGTGACTGAGGACAAAACAGAGATTATGCCTGAGATTCTCCTCAATTCCCCTATAGCTAACATCAAGGCCATCTCTCCCAACAGCAAGAGAGTCTCTCCCCCTCAACCCGGCTCCTCGGAGTCAGGCTCAATCCTAAGGAGAAGAGGTAATGGCCGGAAGCTGATACTACGGTCTATTCCAGCATTTCCTTCTCTCAACCCAAATCAGTGAATCAAAAACAATTTGGTTAAGCTATGGAAAAATTCTTTGTATCTTTGTAATGTTCCAGATCCTATTAGCCTATCATTGTTTCCATAACATAAGGCATAAGCAACGTTATTGTAAGATACTTTATTCTAGTAGTAGTAGGTAATGTAATAGTACATTCTAGTTCATAATCTTCCAGAAAGAACGTCCTAAACTGGACTTTGAGAAAAGCTAAGTTCGAAACATAGAGTCAAACCAGATACATACAGTTTAGCAGAAACTACAAAGATTACTCATTTCATTTGCTCTAATATTTCAGAAACCATGCAACAAAATACTTCTAGAGTCAGTACCATGATTATATAGTGAAAAATAAATAGTAAGCTTGATGCTGTTACGTTAGAATCCACCCTACTCTTCATTACCGGAAGATCTCATACAGCCGCAGAAACGATTTTTCTTCTTTCTCG
CDS Sequence
- >AT3G22780.1
ATGGACAAATCCCAGAAGAATCCTACTTCCCAGATCGGAACTTCAACTCCCAAATCCAAATTCGAGGATTCTCCAGTGTTCAACTACATAAGCAACCTCTCTCCAATTGAGTCGGTCAAATCTATCTCCACTGCTCAAACGTTTAGCTCTCTTAGTTTCACATCTCCTCCTCCTGTGTTTACTTCTCCTCACGTCATTTCTCACAGAGAATCCAGATTCTTCAGATGTCATAACTCTGTTGATCGTTCAAAGCACTTAGAATCTTTAGATGGATCTGCTGTTAAAGGAGAAGTTGTAGTACCATTAGTTGAAGATCTAAATAAAGAAGCTTCTTTGGAAGATGAAGAAGAAACTTCTGTTGAAACGTCTTCTGAGCTGCCACAGATCATGAAGTTCGATAGCCAAACTTCTGAGCATAGTGATTCACCTTGCACTGAAGATGTTGTTATTGAAGCTTCATCTGATCCTCCTCGAGGAGACAATGGTTCGTCATCCGAGGATGTCACGATGGGACTTCAGAATATGCTTGTTGTTCGGGAAGGGAATGACACTCCTGGTTGTGGACGTTTGATCTCAGATGCAACTGAGCTGTTAGTATTTCGATCTCCGAATGATTCTGAGGCTTTTAGATGCTTGGTCGATAAAATATCAAGCTCAGAAAGACGGTTCTGTGCTGGTGTCAAGTCTACAAAGCGGCCTGATATCAACAAAGATATTCCAGCCAATGGATCTAGTAATGAAAATCAGCCTTTGGCTGTGCTTCCTACAAACGAGTCTGTCTTTAACTTGCATCGTGGTGGCATGCGAAGACGCTGCCTTGACTTTGAGATGCCAGGGAAACGGAAGAAGGATATTGTTGATGATCAGCAATCTGTGTGTGACAATAATGTGGCTGGTGAATCTTCCTCGAGCTGTGTTGTACCTGGTATTGGTCTTCATCTAAACGCCGTTGCAATGTCTGCAAAGGACAGTAACATCAGTGTCATACATGGCTATTCCATATCTGGAGAGATTCAAAAGAGTTTCTCAGGCTCTACCACTCCAATTCAGTCCCAAGACACTGTGCAAGAAACTTCGGACCAGGCAGAAAACGAACCTGTAGAAGAAGTTCCCAAAGCATTGGTGTTCCCAGAGTTGAATCTAGGCAGCCTTAAGAAAAAGATGCGTAAATCTGAACAAGCTGGGGAGGGTGAGTCATGTAAACGATGCAACTGCAAAAAGTCTAAGTGTTTGAAGCTTTACTGTGAATGCTTTGCTGCTGGGGTTTATTGCATAGAGCCATGTTCATGTATAGATTGCTTCAACAAACCTATCCATGAAGAAACTGTTTTGGCTACCCGCAAACAGATTGAATCCCGAAATCCACTTGCATTTGCTCCTAAAGTCATCAGAAATGCAGATTCCATCATGGAAGCTAGTGATGATGCCAGTAAAACCCCGGCTTCTGCACGACACAAACGTGGCTGCAACTGCAAGAAATCAAACTGTATGAAGAAATACTGTGAATGCTATCAGGGTGGAGTCGGCTGTTCCATGAACTGTAGATGCGAAGGATGCACAAATGTATTCGGCAGAAAAGATGGGTCTTTACTTGTTATCATGGAAAGCAAACTAGAGGAGAATCAGGAGACATATGAGAAAAGAATAGCAAAAATCCAACACAACGTCGAGGTGTCGAAAGAAGTGGAGCAGAACCCAAGTTCTGATCAACCTTCGACACCACTGCCACCGTACAGACATTTGGTGGTTCATCAGCCATTCTTGTCTAAGAACAGACTGCCTCCGACACAGTTTTTTCTTGGCACAGGTTCTTCCTCTTTCAGAAAACCAAACAGTGATTTGGCGCAATCACAGAATGAGAAGAAGCCTCTTGAAACTGTGACTGAGGACAAAACAGAGATTATGCCTGAGATTCTCCTCAATTCCCCTATAGCTAACATCAAGGCCATCTCTCCCAACAGCAAGAGAGTCTCTCCCCCTCAACCCGGCTCCTCGGAGTCAGGCTCAATCCTAAGGAGAAGAGGTAATGGCCGGAAGCTGATACTACGGTCTATTCCAGCATTTCCTTCTCTCAACCCAAATCAGTGA
Protein Sequence
- >AT3G22780.1
MDKSQKNPTSQIGTSTPKSKFEDSPVFNYISNLSPIESVKSISTAQTFSSLSFTSPPPVFTSPHVISHRESRFFRCHNSVDRSKHLESLDGSAVKGEVVVPLVEDLNKEASLEDEEETSVETSSELPQIMKFDSQTSEHSDSPCTEDVVIEASSDPPRGDNGSSSEDVTMGLQNMLVVREGNDTPGCGRLISDATELLVFRSPNDSEAFRCLVDKISSSERRFCAGVKSTKRPDINKDIPANGSSNENQPLAVLPTNESVFNLHRGGMRRRCLDFEMPGKRKKDIVDDQQSVCDNNVAGESSSSCVVPGIGLHLNAVAMSAKDSNISVIHGYSISGEIQKSFSGSTTPIQSQDTVQETSDQAENEPVEEVPKALVFPELNLGSLKKKMRKSEQAGEGESCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCIDCFNKPIHEETVLATRKQIESRNPLAFAPKVIRNADSIMEASDDASKTPASARHKRGCNCKKSNCMKKYCECYQGGVGCSMNCRCEGCTNVFGRKDGSLLVIMESKLEENQETYEKRIAKIQHNVEVSKEVEQNPSSDQPSTPLPPYRHLVVHQPFLSKNRLPPTQFFLGTGSSSFRKPNSDLAQSQNEKKPLETVTEDKTEIMPEILLNSPIANIKAISPNSKRVSPPQPGSSESGSILRRRGNGRKLILRSIPAFPSLNPNQ