Information report for AT3G22320
Gene Details
|
|
Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
Functional Keywords
Literature and News
- Arabidopsis thaliana RNA polymerase II subunits related to yeast and human RPB5. DOI: 10.1016/s0378-1119(99)00090-6 ; PMID: 10231567
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Subunit compositions of the RNA-silencing enzymes Pol IV and Pol V reveal their origins as specialized forms of RNA polymerase II. DOI: 10.1016/j.molcel.2008.12.015 ; PMID: 19110459
Gene Resources
- UniProt: A0A178VI93
- EMBL: CACRSJ010000106, CACSHJ010000089, LUHQ01000003
- AlphaFoldDB: A0A178VI93
- EnsemblPlants: AT3G22320.1
- Gramene: AT3G22320.1
- KEGG: ath:AT3G22320
- Orthologous matrix: TERMEDH
- ExpressionAtlas: AT3G22320
- InterPro: IPR000783, IPR005571, IPR014381
- PANTHER: PTHR10535, PTHR10535:SF0
- SUPFAM: SSF53036, SSF55287
- PROSITE: PS01110
- Gene3D: 3.40.1340.10, 3.90.940.20
- OrthoDB: A0A178VI93
- SWISS-MODEL: A0A178VI93
Homologs
- Fragaria vesca FvH4_7g09290
- Rosa chinensis RchiOBHm_Chr1g0344081
Sequences
cDNA Sequence
- >AT3G22320.1
ATAGAATTGAGAAAAGGGTTCGAGGTAAAAGGAGAAAGCTTGAAACGCCGCTTCTTCTTCTTCTTCTTCCACTGTCGTTCTCTCTGTAAATCGCTTCTTCAATCATCTCTGTGGATTTGTCTCTATTCATAACTTGGTGAAGAAGATGTTGACGGAAGAGGAGCTCAAAAGATTGTACAGAATCCAGAAGACGTTGATGCAGATGTTAAGGGATCGTGGATATTTTATCGCGGATTCTGAACTTACGATGACTAAACAACAGTTTATTAGGAAACATGGTGATAACATGAAAAGAGAGGATCTTGTTACTCTTAAGGCTAAGCGAAATGATAATAGTGATCAGCTCTATATATTCTTCCCTGATGAGGCGAAAGTTGGTGTGAAGACGATGAAAATGTACACGAACAGGATGAAATCAGAGAATGTGTTCAGAGCTATTTTGGTTGTGCAACAGAACTTGACCCCGTTTGCTCGAACTTGCATTAGTGAGATCTCTTCTAAGTTTCATCTGGAAGTTTTCCAGGAGGCGGAAATGCTAGTGAACATTAAAGAACATGTTCTTGTTCCTGAGCATCAAGTTCTTACCACTGAAGAGAAGAAAACTTTACTGGAGAGATACACAGTGAAGGAGACACAGCTTCCAAGGATCCAAGTGACTGATCCAATCGCAAGATACTTTGGACTAAAACGTGGGCAAGTCGTGAAGATCATTCGTCCGAGTGAAACGGCTGGTCGTTATGTTACCTATCGTTATGTTGTATAAGCCAAAGCAAAAGGCTTTTGTGGATTGTAATGCGAATTGAACGCTGAGAGTTGTGAAACATAAGAGTAATGCTTTTGTACTAAACCAAACTGATGACTGTGTTTTATTTTTGTTTGTCCGATAGGAGAAATTAAAGCTTGAAACAACTTATTTGTATTAGTTTTCTATCCAAAAACTTGCAAGATCCGATTCCGACTTGTTTGTATTTGTTCATCCCAACAAATGCCATATTTTGTTAATAA
CDS Sequence
- >AT3G22320.1
ATGTTGACGGAAGAGGAGCTCAAAAGATTGTACAGAATCCAGAAGACGTTGATGCAGATGTTAAGGGATCGTGGATATTTTATCGCGGATTCTGAACTTACGATGACTAAACAACAGTTTATTAGGAAACATGGTGATAACATGAAAAGAGAGGATCTTGTTACTCTTAAGGCTAAGCGAAATGATAATAGTGATCAGCTCTATATATTCTTCCCTGATGAGGCGAAAGTTGGTGTGAAGACGATGAAAATGTACACGAACAGGATGAAATCAGAGAATGTGTTCAGAGCTATTTTGGTTGTGCAACAGAACTTGACCCCGTTTGCTCGAACTTGCATTAGTGAGATCTCTTCTAAGTTTCATCTGGAAGTTTTCCAGGAGGCGGAAATGCTAGTGAACATTAAAGAACATGTTCTTGTTCCTGAGCATCAAGTTCTTACCACTGAAGAGAAGAAAACTTTACTGGAGAGATACACAGTGAAGGAGACACAGCTTCCAAGGATCCAAGTGACTGATCCAATCGCAAGATACTTTGGACTAAAACGTGGGCAAGTCGTGAAGATCATTCGTCCGAGTGAAACGGCTGGTCGTTATGTTACCTATCGTTATGTTGTATAA
Protein Sequence
- >AT3G22320.1
MLTEEELKRLYRIQKTLMQMLRDRGYFIADSELTMTKQQFIRKHGDNMKREDLVTLKAKRNDNSDQLYIFFPDEAKVGVKTMKMYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFHLEVFQEAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGLKRGQVVKIIRPSETAGRYVTYRYVV