Gene Details:
- Gene ID: AT3G22310
- Gene Symbol: ATRH9, PMH1
- Gene Name: RNA HELICASE 9, putative mitochondrial RNA helicase 1
- Description: putative mitochondrial RNA helicase 1;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Literature:
- Nuclear genes that encode mitochondrial proteins for DNA and RNA metabolism are clustered in the Arabidopsis genome. DOI: 10.1105/tpc.010009 ; PMID: 12837951
- OsBIRH1, a DEAD-box RNA helicase with functions in modulating defence responses against pathogen infection and oxidative stress. DOI: 10.1093/jxb/ern072 ; PMID: 18441339
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- Chloroplast RH3 DEAD box RNA helicases in maize and Arabidopsis function in splicing of specific group II introns and affect chloroplast ribosome biogenesis. DOI: 10.1104/pp.112.197525 ; PMID: 22576849
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Recruitment of Arabidopsis RNA Helicase AtRH9 to the Viral Replication Complex by Viral Replicase to Promote Turnip Mosaic Virus Replication. DOI: 10.1038/srep30297 ; PMID: 27456972
Sequences:
cDNA Sequence
- >AT3G22310.2
AAACCCTTTTGCCGTCTCCCTAAAACCCTAATTCTCATTTCTGGGGTTTCACATTTCATCTTCACCAGAATCCATCACACTCTCTGAAATCTGAAAATGATTAGCACAGTACTTCGCCGATCTATCCTTGGTACGTCAAGGCGTACTCTCGCCGCTTCGGTGACCTCCATTAACGCAGCTCTATTTCATAACCTTGCTCCAGCCGCCGCCACAGTCTCCGATCTAGCAAATGGAGCTACTAATGTCAAGTCTCTCCCTTCGAATTCGAGCCCTTTTGGTGTTAAAGTGAGAGACTTTCATGTTAAATCTGTACCGTCGGAGTTTAGATCGTCGATTGTTTCTTCTGCGGGATTCGCGGCTCAAGAGTATGCTCCTTCTTATGAGAACGATGGAGGGATTGGAGATTCGGAGAGTGTTGGTAGCAGCGGTGGTGGTGATGGGCTTGCGATAGCTGATCTTGGTATATCTCCGGAGATTGTTAAAGCTTTGAAGGGTAGGGGTATTGAGAAACTCTTTCCTATTCAGAAAGCTGTGTTGGAGCCAGCGATGGAGGGTCGTGATATGATTGGCCGTGCAAGGACTGGAACGGGAAAGACACTTGCTTTTGGGATTCCTATTATTGACAAAATCATCAAATTCAACGCTAAACATGGTCGTGGGAAGAATCCTCAGTGCTTGGTTTTGGCACCGACGAGGGAGCTTGCTCGTCAGGTTGAGAAAGAGTTCAGGGAATCTGCTCCAAGTTTGGATACTATTTGTCTCTATGGAGGTACACCAATCGGGCAACAAATGAGGGAGCTGAACTATGGTATTGATGTGGCGGTTGGAACTCCTGGTCGTATCATTGATCTGATGAAAAGGGGAGCTTTGAATCTATCAGAGGTTCAGTTTGTGGTTCTTGATGAAGCTGATCAGATGCTTCAAGTTGGATTTGCGGAAGATGTTGAAATAATATTGCAGAAGTTGCCAGCGAAGCGTCAGAGTATGATGTTTTCTGCAACAATGCCAAGTTGGATCAGATCTCTCACCAAGAAGTACCTGAACAATCCTTTGACAATTGATCTTGTTGGAGATTCAGATCAGAAACTTGCAGATGGGATTACTATGTATTCTATCGCTGCAGATTCTTATGGAAGAGCATCCATCATTGGTCCTCTTGTAAAGGAACATGGCAAAGGAGGAAAATGCATTGTCTTTACCCAAACAAAACGTGATGCAGATCGCCTTGCATTTGGATTGGCAAAAAGCTATAAATGTGAAGCTTTACACGGTGACATATCTCAAGCTCAGAGAGAAAGAACACTTGCTGGTTTCAGGGATGGGAATTTCAGTATTCTTGTTGCAACTGATGTTGCTGCCCGTGGACTTGATGTACCTAATGTCGATTTAGTAATTCATTATGAGCTTCCTAATAACACGGAGACGTTTGTTCACCGAACGGGGCGAACTGGTCGTGCTGGAAAGAAAGGAAGCGCGATTCTCATCCACGGTCAAGATCAAACCAGGGCTGTTAAAATGATTGAGAAAGAAGTCGGAAGCAGATTCAATGAGCTGCCTAGCATTGCTGTGGAAAGAGGAAGCGCAAGCATGTTTGAAGGAGTAGGTGCTAGATCTGGTGGGTCGTTCGGAGGAGGTCGATCAGGCGGTGGTGGGTATGGTAGTTACGGTAGCAGCAGTGGCCGTTCAGGTGGTGGTGGTGGTAGTTATGGAGGTTCAGGGGGATCAAGCAGCCGTTACTCTGGTGGTTCAGACCGCTCATCTGGTTTCGGAAGCTTTGGTTCAGGCGGTTCTTCAGGAGGATTTGGTTCAGACCGTTCTTCTCAGTCAAGTGGAAGGAGCAGCTTTGGTGGGTTTGGATCAAACGATGGTAAAAGATCTTACTGAGAGAAGTGTTGTGTTGGTTTTGACCCGACTCAGCAATAATGGAGTTGACTTAGGAGAGAACTCGGTATCTCGAGTTGAGTAGTTTACAAGGAGTCGAGCTATATATAAATTCTGTAGCTACTTCTTGTCTCATAAACCAACATAAGTTATATCATTATTTCATATCCTCTAATTCATTTTTATTTCTCAATTTGAGTGAAATGTGTTTCCCTTACTTCGCCACTTCCATTTATGAATCTTGTTAGATTGTGAGAAAAGGAAATAATGTGGTT - >AT3G22310.1
AAACCCTTTTGCCGTCTCCCTAAAACCCTAATTCTCATTTCTGGGGTTTCACATTTCATCTTCACCAGAATCCATCACACTCTCTGAAATCTGAAAATGATTAGCACAGTACTTCGCCGATCTATCCTTGGTACGTCAAGGCGTACTCTCGCCGCTTCGGTGACCTCCATTAACGCAGCTCTATTTCATAACCTTGCTCCAGCCGCCGCCACAGTCTCCGATCTAGCAAATGGAGCTACTAATGTCAAGTCTCTCCCTTCGAATTCGAGCCCTTTTGGTGTTAAAGTGAGAGACTTTCATGTTAAATCTGTACCGTCGGAGTTTAGATCGTCGATTGTTTCTTCTGCGGGATTCGCGGCTCAAGAGTATGCTCCTTCTTATGAGAACGATGGAGGGATTGGAGATTCGGAGAGTGTTGGTAGCAGCGGTGGTGGTGATGGGCTTGCGATAGCTGATCTTGGTATATCTCCGGAGATTGTTAAAGCTTTGAAGGGTAGGGGTATTGAGAAACTCTTTCCTATTCAGAAAGCTGTGTTGGAGCCAGCGATGGAGGGTCGTGATATGATTGGCCGTGCAAGGACTGGAACGGGAAAGACACTTGCTTTTGGGATTCCTATTATTGACAAAATCATCAAATTCAACGCTAAACATGGTCGTGGGAAGAATCCTCAGTGCTTGGTTTTGGCACCGACGAGGGAGCTTGCTCGTCAGGTTGAGAAAGAGTTCAGGGAATCTGCTCCAAGTTTGGATACTATTTGTCTCTATGGAGGTACACCAATCGGGCAACAAATGAGGGAGCTGAACTATGGTATTGATGTGGCGGTTGGAACTCCTGGTCGTATCATTGATCTGATGAAAAGGGGAGCTTTGAATCTATCAGAGGTTCAGTTTGTGGTTCTTGATGAAGCTGATCAGATGCTTCAAGTTGGATTTGCGGAAGATGTTGAAATAATATTGCAGAAGTTGCCAGCGAAGCGTCAGAGTATGATGTTTTCTGCAACAATGCCAAGTTGGATCAGATCTCTCACCAAGAAGTACCTGAACAATCCTTTGACAATTGATCTTGTTGGAGATTCAGATCAGAAACTTGCAGATGGGATTACTATGTATTCTATCGCTGCAGATTCTTATGGAAGAGCATCCATCATTGGTCCTCTTGTAAAGGAACATGGCAAAGGAGGAAAATGCATTGTCTTTACCCAAACAAAACGTGATGCAGATCGCCTTGCATTTGGATTGGCAAAAAGCTATAAATGTGAAGCTTTACACGGTGACATATCTCAAGCTCAGAGAGAAAGAACACTTGCTGGTTTCAGGGATGGGAATTTCAGTATTCTTGTTGCAACTGATGTTGCTGCCCGTGGACTTGATGTACCTAATGTCGATTTAGTAATTCATTATGAGCTTCCTAATAACACGGAGACGTTTGTTCACCGAACGGGGCGAACTGGTCGTGCTGGAAAGAAAGGAAGCGCGATTCTCATCCACGGTCAAGATCAAACCAGGGCTGTTAAAATGATTGAGAAAGAAGTCGGAAGCAGATTCAATGAGCTGCCTAGCATTGCTGTGGAAAGAGGAAGCGCAAGCATGTTTGAAGGAGTAGGTGCTAGATCTGGTGGGTCGTTCGGAGGAGGTCGATCAGGCGGTGGTGGGTATGGTAGTTACGGTAGCAGCAGTGGCCGTTCAGGTGGTGGTGGTGGTAGTTATGGAGGTTCAGGGGGATCAAGCAGCCGTTACTCTGGTGGTTCAGACCGCTCATCTGGTTTCGGAAGCTTTGGTTCAGGCGGTTCTTCAGGAGGATTTGGTTCAGACCGTTCTTCTCAGTCAAGTGGAAGGAGCAGCTTTGGTGGGTTTGGATCAAACGATGGTAAAAGATCTTACTGAGAGAAGTGTTGTGTTGGTTTTGACCCGACTCAGCAATAATGGAGTTGACTTAGGAGAGAACTCGGTATCTCGAGTTGAGTAGTTTACAAGGAGTCGAGCTATATATAAATTCTGTAGCTACTTCTTGTCTCATAAACCAACATAAGTTATATCATTATTTCATATCCTCTAATTCATTTTTATTTCTCAATTTGAGTGAAATGTGTTTCCCTTACTTCGCCACTTCCATTTATGAATCTTGTTAGATTGTGAGAAAAGGAAATAATGTGGTT
CDS Sequence
- >AT3G22310.2
ATGATTAGCACAGTACTTCGCCGATCTATCCTTGGTACGTCAAGGCGTACTCTCGCCGCTTCGGTGACCTCCATTAACGCAGCTCTATTTCATAACCTTGCTCCAGCCGCCGCCACAGTCTCCGATCTAGCAAATGGAGCTACTAATGTCAAGTCTCTCCCTTCGAATTCGAGCCCTTTTGGTGTTAAAGTGAGAGACTTTCATGTTAAATCTGTACCGTCGGAGTTTAGATCGTCGATTGTTTCTTCTGCGGGATTCGCGGCTCAAGAGTATGCTCCTTCTTATGAGAACGATGGAGGGATTGGAGATTCGGAGAGTGTTGGTAGCAGCGGTGGTGGTGATGGGCTTGCGATAGCTGATCTTGGTATATCTCCGGAGATTGTTAAAGCTTTGAAGGGTAGGGGTATTGAGAAACTCTTTCCTATTCAGAAAGCTGTGTTGGAGCCAGCGATGGAGGGTCGTGATATGATTGGCCGTGCAAGGACTGGAACGGGAAAGACACTTGCTTTTGGGATTCCTATTATTGACAAAATCATCAAATTCAACGCTAAACATGGTCGTGGGAAGAATCCTCAGTGCTTGGTTTTGGCACCGACGAGGGAGCTTGCTCGTCAGGTTGAGAAAGAGTTCAGGGAATCTGCTCCAAGTTTGGATACTATTTGTCTCTATGGAGGTACACCAATCGGGCAACAAATGAGGGAGCTGAACTATGGTATTGATGTGGCGGTTGGAACTCCTGGTCGTATCATTGATCTGATGAAAAGGGGAGCTTTGAATCTATCAGAGGTTCAGTTTGTGGTTCTTGATGAAGCTGATCAGATGCTTCAAGTTGGATTTGCGGAAGATGTTGAAATAATATTGCAGAAGTTGCCAGCGAAGCGTCAGAGTATGATGTTTTCTGCAACAATGCCAAGTTGGATCAGATCTCTCACCAAGAAGTACCTGAACAATCCTTTGACAATTGATCTTGTTGGAGATTCAGATCAGAAACTTGCAGATGGGATTACTATGTATTCTATCGCTGCAGATTCTTATGGAAGAGCATCCATCATTGGTCCTCTTGTAAAGGAACATGGCAAAGGAGGAAAATGCATTGTCTTTACCCAAACAAAACGTGATGCAGATCGCCTTGCATTTGGATTGGCAAAAAGCTATAAATGTGAAGCTTTACACGGTGACATATCTCAAGCTCAGAGAGAAAGAACACTTGCTGGTTTCAGGGATGGGAATTTCAGTATTCTTGTTGCAACTGATGTTGCTGCCCGTGGACTTGATGTACCTAATGTCGATTTAGTAATTCATTATGAGCTTCCTAATAACACGGAGACGTTTGTTCACCGAACGGGGCGAACTGGTCGTGCTGGAAAGAAAGGAAGCGCGATTCTCATCCACGGTCAAGATCAAACCAGGGCTGTTAAAATGATTGAGAAAGAAGTCGGAAGCAGATTCAATGAGCTGCCTAGCATTGCTGTGGAAAGAGGAAGCGCAAGCATGTTTGAAGGAGTAGGTGCTAGATCTGGTGGGTCGTTCGGAGGAGGTCGATCAGGCGGTGGTGGGTATGGTAGTTACGGTAGCAGCAGTGGCCGTTCAGGTGGTGGTGGTGGTAGTTATGGAGGTTCAGGGGGATCAAGCAGCCGTTACTCTGGTGGTTCAGACCGCTCATCTGGTTTCGGAAGCTTTGGTTCAGGCGGTTCTTCAGGAGGATTTGGTTCAGACCGTTCTTCTCAGTCAAGTGGAAGGAGCAGCTTTGGTGGGTTTGGATCAAACGATGGTAAAAGATCTTACTGA - >AT3G22310.1
ATGATTAGCACAGTACTTCGCCGATCTATCCTTGGTACGTCAAGGCGTACTCTCGCCGCTTCGGTGACCTCCATTAACGCAGCTCTATTTCATAACCTTGCTCCAGCCGCCGCCACAGTCTCCGATCTAGCAAATGGAGCTACTAATGTCAAGTCTCTCCCTTCGAATTCGAGCCCTTTTGGTGTTAAAGTGAGAGACTTTCATGTTAAATCTGTACCGTCGGAGTTTAGATCGTCGATTGTTTCTTCTGCGGGATTCGCGGCTCAAGAGTATGCTCCTTCTTATGAGAACGATGGAGGGATTGGAGATTCGGAGAGTGTTGGTAGCAGCGGTGGTGGTGATGGGCTTGCGATAGCTGATCTTGGTATATCTCCGGAGATTGTTAAAGCTTTGAAGGGTAGGGGTATTGAGAAACTCTTTCCTATTCAGAAAGCTGTGTTGGAGCCAGCGATGGAGGGTCGTGATATGATTGGCCGTGCAAGGACTGGAACGGGAAAGACACTTGCTTTTGGGATTCCTATTATTGACAAAATCATCAAATTCAACGCTAAACATGGTCGTGGGAAGAATCCTCAGTGCTTGGTTTTGGCACCGACGAGGGAGCTTGCTCGTCAGGTTGAGAAAGAGTTCAGGGAATCTGCTCCAAGTTTGGATACTATTTGTCTCTATGGAGGTACACCAATCGGGCAACAAATGAGGGAGCTGAACTATGGTATTGATGTGGCGGTTGGAACTCCTGGTCGTATCATTGATCTGATGAAAAGGGGAGCTTTGAATCTATCAGAGGTTCAGTTTGTGGTTCTTGATGAAGCTGATCAGATGCTTCAAGTTGGATTTGCGGAAGATGTTGAAATAATATTGCAGAAGTTGCCAGCGAAGCGTCAGAGTATGATGTTTTCTGCAACAATGCCAAGTTGGATCAGATCTCTCACCAAGAAGTACCTGAACAATCCTTTGACAATTGATCTTGTTGGAGATTCAGATCAGAAACTTGCAGATGGGATTACTATGTATTCTATCGCTGCAGATTCTTATGGAAGAGCATCCATCATTGGTCCTCTTGTAAAGGAACATGGCAAAGGAGGAAAATGCATTGTCTTTACCCAAACAAAACGTGATGCAGATCGCCTTGCATTTGGATTGGCAAAAAGCTATAAATGTGAAGCTTTACACGGTGACATATCTCAAGCTCAGAGAGAAAGAACACTTGCTGGTTTCAGGGATGGGAATTTCAGTATTCTTGTTGCAACTGATGTTGCTGCCCGTGGACTTGATGTACCTAATGTCGATTTAGTAATTCATTATGAGCTTCCTAATAACACGGAGACGTTTGTTCACCGAACGGGGCGAACTGGTCGTGCTGGAAAGAAAGGAAGCGCGATTCTCATCCACGGTCAAGATCAAACCAGGGCTGTTAAAATGATTGAGAAAGAAGTCGGAAGCAGATTCAATGAGCTGCCTAGCATTGCTGTGGAAAGAGGAAGCGCAAGCATGTTTGAAGGAGTAGGTGCTAGATCTGGTGGGTCGTTCGGAGGAGGTCGATCAGGCGGTGGTGGGTATGGTAGTTACGGTAGCAGCAGTGGCCGTTCAGGTGGTGGTGGTGGTAGTTATGGAGGTTCAGGGGGATCAAGCAGCCGTTACTCTGGTGGTTCAGACCGCTCATCTGGTTTCGGAAGCTTTGGTTCAGGCGGTTCTTCAGGAGGATTTGGTTCAGACCGTTCTTCTCAGTCAAGTGGAAGGAGCAGCTTTGGTGGGTTTGGATCAAACGATGGTAAAAGATCTTACTGA
Protein Sequence
- >AT3G22310.2
MISTVLRRSILGTSRRTLAASVTSINAALFHNLAPAAATVSDLANGATNVKSLPSNSSPFGVKVRDFHVKSVPSEFRSSIVSSAGFAAQEYAPSYENDGGIGDSESVGSSGGGDGLAIADLGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKFNAKHGRGKNPQCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQQMRELNYGIDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAKRQSMMFSATMPSWIRSLTKKYLNNPLTIDLVGDSDQKLADGITMYSIAADSYGRASIIGPLVKEHGKGGKCIVFTQTKRDADRLAFGLAKSYKCEALHGDISQAQRERTLAGFRDGNFSILVATDVAARGLDVPNVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAILIHGQDQTRAVKMIEKEVGSRFNELPSIAVERGSASMFEGVGARSGGSFGGGRSGGGGYGSYGSSSGRSGGGGGSYGGSGGSSSRYSGGSDRSSGFGSFGSGGSSGGFGSDRSSQSSGRSSFGGFGSNDGKRSY - >AT3G22310.1
MISTVLRRSILGTSRRTLAASVTSINAALFHNLAPAAATVSDLANGATNVKSLPSNSSPFGVKVRDFHVKSVPSEFRSSIVSSAGFAAQEYAPSYENDGGIGDSESVGSSGGGDGLAIADLGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKFNAKHGRGKNPQCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQQMRELNYGIDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAKRQSMMFSATMPSWIRSLTKKYLNNPLTIDLVGDSDQKLADGITMYSIAADSYGRASIIGPLVKEHGKGGKCIVFTQTKRDADRLAFGLAKSYKCEALHGDISQAQRERTLAGFRDGNFSILVATDVAARGLDVPNVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAILIHGQDQTRAVKMIEKEVGSRFNELPSIAVERGSASMFEGVGARSGGSFGGGRSGGGGYGSYGSSSGRSGGGGGSYGGSGGSSSRYSGGSDRSSGFGSFGSGGSSGGFGSDRSSQSSGRSSFGGFGSNDGKRSY