Information report for AT3G22310
Gene Details
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Functional Descriptions
Functional Keywords
Literature and News
- Nuclear genes that encode mitochondrial proteins for DNA and RNA metabolism are clustered in the Arabidopsis genome. DOI: 10.1105/tpc.010009 ; PMID: 12837951
- OsBIRH1, a DEAD-box RNA helicase with functions in modulating defence responses against pathogen infection and oxidative stress. DOI: 10.1093/jxb/ern072 ; PMID: 18441339
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- Chloroplast RH3 DEAD box RNA helicases in maize and Arabidopsis function in splicing of specific group II introns and affect chloroplast ribosome biogenesis. DOI: 10.1104/pp.112.197525 ; PMID: 22576849
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Recruitment of Arabidopsis RNA Helicase AtRH9 to the Viral Replication Complex by Viral Replicase to Promote Turnip Mosaic Virus Replication. DOI: 10.1038/srep30297 ; PMID: 27456972
Gene Resources
- UniProt: A0A1I9LT07
- EMBL: CP002686
- AlphaFoldDB: A0A1I9LT07
- EnsemblPlants: AT3G22310.2
- Gramene: AT3G22310.2
- Orthologous matrix: SEVISWH
- ExpressionAtlas: AT3G22310
- InterPro: IPR001650, IPR011545, IPR014001
- PANTHER: PTHR47959, PTHR47959:SF23
- SUPFAM: SSF52540
- PROSITE: PS51192, PS51194, PS51195
- Gene3D: 3.40.50.300
- SWISS-MODEL: A0A1I9LT07
- Conserved Domain Database: cd00268, cd18787
Homologs
- Brassica oleracea Bo4g182150
- Oryza sativa PRP5;OsRH42, OsRH34, OsRH2, OseIF4A, eIF-4a;EIF4A, DDX47;TOGR1, OsRH36, OsABP, OsAIP2, OsAIP1;OsBAT1, OsRH17
- Solanum tuberosum Soltu.DM.12G004370
Sequences
cDNA Sequence
- >AT3G22310.2
AAACCCTTTTGCCGTCTCCCTAAAACCCTAATTCTCATTTCTGGGGTTTCACATTTCATCTTCACCAGAATCCATCACACTCTCTGAAATCTGAAAATGATTAGCACAGTACTTCGCCGATCTATCCTTGGTACGTCAAGGCGTACTCTCGCCGCTTCGGTGACCTCCATTAACGCAGCTCTATTTCATAACCTTGCTCCAGCCGCCGCCACAGTCTCCGATCTAGCAAATGGAGCTACTAATGTCAAGTCTCTCCCTTCGAATTCGAGCCCTTTTGGTGTTAAAGTGAGAGACTTTCATGTTAAATCTGTACCGTCGGAGTTTAGATCGTCGATTGTTTCTTCTGCGGGATTCGCGGCTCAAGAGTATGCTCCTTCTTATGAGAACGATGGAGGGATTGGAGATTCGGAGAGTGTTGGTAGCAGCGGTGGTGGTGATGGGCTTGCGATAGCTGATCTTGGTATATCTCCGGAGATTGTTAAAGCTTTGAAGGGTAGGGGTATTGAGAAACTCTTTCCTATTCAGAAAGCTGTGTTGGAGCCAGCGATGGAGGGTCGTGATATGATTGGCCGTGCAAGGACTGGAACGGGAAAGACACTTGCTTTTGGGATTCCTATTATTGACAAAATCATCAAATTCAACGCTAAACATGGTCGTGGGAAGAATCCTCAGTGCTTGGTTTTGGCACCGACGAGGGAGCTTGCTCGTCAGGTTGAGAAAGAGTTCAGGGAATCTGCTCCAAGTTTGGATACTATTTGTCTCTATGGAGGTACACCAATCGGGCAACAAATGAGGGAGCTGAACTATGGTATTGATGTGGCGGTTGGAACTCCTGGTCGTATCATTGATCTGATGAAAAGGGGAGCTTTGAATCTATCAGAGGTTCAGTTTGTGGTTCTTGATGAAGCTGATCAGATGCTTCAAGTTGGATTTGCGGAAGATGTTGAAATAATATTGCAGAAGTTGCCAGCGAAGCGTCAGAGTATGATGTTTTCTGCAACAATGCCAAGTTGGATCAGATCTCTCACCAAGAAGTACCTGAACAATCCTTTGACAATTGATCTTGTTGGAGATTCAGATCAGAAACTTGCAGATGGGATTACTATGTATTCTATCGCTGCAGATTCTTATGGAAGAGCATCCATCATTGGTCCTCTTGTAAAGGAACATGGCAAAGGAGGAAAATGCATTGTCTTTACCCAAACAAAACGTGATGCAGATCGCCTTGCATTTGGATTGGCAAAAAGCTATAAATGTGAAGCTTTACACGGTGACATATCTCAAGCTCAGAGAGAAAGAACACTTGCTGGTTTCAGGGATGGGAATTTCAGTATTCTTGTTGCAACTGATGTTGCTGCCCGTGGACTTGATGTACCTAATGTCGATTTAGTAATTCATTATGAGCTTCCTAATAACACGGAGACGTTTGTTCACCGAACGGGGCGAACTGGTCGTGCTGGAAAGAAAGGAAGCGCGATTCTCATCCACGGTCAAGATCAAACCAGGGCTGTTAAAATGATTGAGAAAGAAGTCGGAAGCAGATTCAATGAGCTGCCTAGCATTGCTGTGGAAAGAGGAAGCGCAAGCATGTTTGAAGGAGTAGGTGCTAGATCTGGTGGGTCGTTCGGAGGAGGTCGATCAGGCGGTGGTGGGTATGGTAGTTACGGTAGCAGCAGTGGCCGTTCAGGTGGTGGTGGTGGTAGTTATGGAGGTTCAGGGGGATCAAGCAGCCGTTACTCTGGTGGTTCAGACCGCTCATCTGGTTTCGGAAGCTTTGGTTCAGGCGGTTCTTCAGGAGGATTTGGTTCAGACCGTTCTTCTCAGTCAAGTGGAAGGAGCAGCTTTGGTGGGTTTGGATCAAACGATGGTAAAAGATCTTACTGAGAGAAGTGTTGTGTTGGTTTTGACCCGACTCAGCAATAATGGAGTTGACTTAGGAGAGAACTCGGTATCTCGAGTTGAGTAGTTTACAAGGAGTCGAGCTATATATAAATTCTGTAGCTACTTCTTGTCTCATAAACCAACATAAGTTATATCATTATTTCATATCCTCTAATTCATTTTTATTTCTCAATTTGAGTGAAATGTGTTTCCCTTACTTCGCCACTTCCATTTATGAATCTTGTTAGATTGTGAGAAAAGGAAATAATGTGGTT - >AT3G22310.1
AAACCCTTTTGCCGTCTCCCTAAAACCCTAATTCTCATTTCTGGGGTTTCACATTTCATCTTCACCAGAATCCATCACACTCTCTGAAATCTGAAAATGATTAGCACAGTACTTCGCCGATCTATCCTTGGTACGTCAAGGCGTACTCTCGCCGCTTCGGTGACCTCCATTAACGCAGCTCTATTTCATAACCTTGCTCCAGCCGCCGCCACAGTCTCCGATCTAGCAAATGGAGCTACTAATGTCAAGTCTCTCCCTTCGAATTCGAGCCCTTTTGGTGTTAAAGTGAGAGACTTTCATGTTAAATCTGTACCGTCGGAGTTTAGATCGTCGATTGTTTCTTCTGCGGGATTCGCGGCTCAAGAGTATGCTCCTTCTTATGAGAACGATGGAGGGATTGGAGATTCGGAGAGTGTTGGTAGCAGCGGTGGTGGTGATGGGCTTGCGATAGCTGATCTTGGTATATCTCCGGAGATTGTTAAAGCTTTGAAGGGTAGGGGTATTGAGAAACTCTTTCCTATTCAGAAAGCTGTGTTGGAGCCAGCGATGGAGGGTCGTGATATGATTGGCCGTGCAAGGACTGGAACGGGAAAGACACTTGCTTTTGGGATTCCTATTATTGACAAAATCATCAAATTCAACGCTAAACATGGTCGTGGGAAGAATCCTCAGTGCTTGGTTTTGGCACCGACGAGGGAGCTTGCTCGTCAGGTTGAGAAAGAGTTCAGGGAATCTGCTCCAAGTTTGGATACTATTTGTCTCTATGGAGGTACACCAATCGGGCAACAAATGAGGGAGCTGAACTATGGTATTGATGTGGCGGTTGGAACTCCTGGTCGTATCATTGATCTGATGAAAAGGGGAGCTTTGAATCTATCAGAGGTTCAGTTTGTGGTTCTTGATGAAGCTGATCAGATGCTTCAAGTTGGATTTGCGGAAGATGTTGAAATAATATTGCAGAAGTTGCCAGCGAAGCGTCAGAGTATGATGTTTTCTGCAACAATGCCAAGTTGGATCAGATCTCTCACCAAGAAGTACCTGAACAATCCTTTGACAATTGATCTTGTTGGAGATTCAGATCAGAAACTTGCAGATGGGATTACTATGTATTCTATCGCTGCAGATTCTTATGGAAGAGCATCCATCATTGGTCCTCTTGTAAAGGAACATGGCAAAGGAGGAAAATGCATTGTCTTTACCCAAACAAAACGTGATGCAGATCGCCTTGCATTTGGATTGGCAAAAAGCTATAAATGTGAAGCTTTACACGGTGACATATCTCAAGCTCAGAGAGAAAGAACACTTGCTGGTTTCAGGGATGGGAATTTCAGTATTCTTGTTGCAACTGATGTTGCTGCCCGTGGACTTGATGTACCTAATGTCGATTTAGTAATTCATTATGAGCTTCCTAATAACACGGAGACGTTTGTTCACCGAACGGGGCGAACTGGTCGTGCTGGAAAGAAAGGAAGCGCGATTCTCATCCACGGTCAAGATCAAACCAGGGCTGTTAAAATGATTGAGAAAGAAGTCGGAAGCAGATTCAATGAGCTGCCTAGCATTGCTGTGGAAAGAGGAAGCGCAAGCATGTTTGAAGGAGTAGGTGCTAGATCTGGTGGGTCGTTCGGAGGAGGTCGATCAGGCGGTGGTGGGTATGGTAGTTACGGTAGCAGCAGTGGCCGTTCAGGTGGTGGTGGTGGTAGTTATGGAGGTTCAGGGGGATCAAGCAGCCGTTACTCTGGTGGTTCAGACCGCTCATCTGGTTTCGGAAGCTTTGGTTCAGGCGGTTCTTCAGGAGGATTTGGTTCAGACCGTTCTTCTCAGTCAAGTGGAAGGAGCAGCTTTGGTGGGTTTGGATCAAACGATGGTAAAAGATCTTACTGAGAGAAGTGTTGTGTTGGTTTTGACCCGACTCAGCAATAATGGAGTTGACTTAGGAGAGAACTCGGTATCTCGAGTTGAGTAGTTTACAAGGAGTCGAGCTATATATAAATTCTGTAGCTACTTCTTGTCTCATAAACCAACATAAGTTATATCATTATTTCATATCCTCTAATTCATTTTTATTTCTCAATTTGAGTGAAATGTGTTTCCCTTACTTCGCCACTTCCATTTATGAATCTTGTTAGATTGTGAGAAAAGGAAATAATGTGGTT
CDS Sequence
- >AT3G22310.2
ATGATTAGCACAGTACTTCGCCGATCTATCCTTGGTACGTCAAGGCGTACTCTCGCCGCTTCGGTGACCTCCATTAACGCAGCTCTATTTCATAACCTTGCTCCAGCCGCCGCCACAGTCTCCGATCTAGCAAATGGAGCTACTAATGTCAAGTCTCTCCCTTCGAATTCGAGCCCTTTTGGTGTTAAAGTGAGAGACTTTCATGTTAAATCTGTACCGTCGGAGTTTAGATCGTCGATTGTTTCTTCTGCGGGATTCGCGGCTCAAGAGTATGCTCCTTCTTATGAGAACGATGGAGGGATTGGAGATTCGGAGAGTGTTGGTAGCAGCGGTGGTGGTGATGGGCTTGCGATAGCTGATCTTGGTATATCTCCGGAGATTGTTAAAGCTTTGAAGGGTAGGGGTATTGAGAAACTCTTTCCTATTCAGAAAGCTGTGTTGGAGCCAGCGATGGAGGGTCGTGATATGATTGGCCGTGCAAGGACTGGAACGGGAAAGACACTTGCTTTTGGGATTCCTATTATTGACAAAATCATCAAATTCAACGCTAAACATGGTCGTGGGAAGAATCCTCAGTGCTTGGTTTTGGCACCGACGAGGGAGCTTGCTCGTCAGGTTGAGAAAGAGTTCAGGGAATCTGCTCCAAGTTTGGATACTATTTGTCTCTATGGAGGTACACCAATCGGGCAACAAATGAGGGAGCTGAACTATGGTATTGATGTGGCGGTTGGAACTCCTGGTCGTATCATTGATCTGATGAAAAGGGGAGCTTTGAATCTATCAGAGGTTCAGTTTGTGGTTCTTGATGAAGCTGATCAGATGCTTCAAGTTGGATTTGCGGAAGATGTTGAAATAATATTGCAGAAGTTGCCAGCGAAGCGTCAGAGTATGATGTTTTCTGCAACAATGCCAAGTTGGATCAGATCTCTCACCAAGAAGTACCTGAACAATCCTTTGACAATTGATCTTGTTGGAGATTCAGATCAGAAACTTGCAGATGGGATTACTATGTATTCTATCGCTGCAGATTCTTATGGAAGAGCATCCATCATTGGTCCTCTTGTAAAGGAACATGGCAAAGGAGGAAAATGCATTGTCTTTACCCAAACAAAACGTGATGCAGATCGCCTTGCATTTGGATTGGCAAAAAGCTATAAATGTGAAGCTTTACACGGTGACATATCTCAAGCTCAGAGAGAAAGAACACTTGCTGGTTTCAGGGATGGGAATTTCAGTATTCTTGTTGCAACTGATGTTGCTGCCCGTGGACTTGATGTACCTAATGTCGATTTAGTAATTCATTATGAGCTTCCTAATAACACGGAGACGTTTGTTCACCGAACGGGGCGAACTGGTCGTGCTGGAAAGAAAGGAAGCGCGATTCTCATCCACGGTCAAGATCAAACCAGGGCTGTTAAAATGATTGAGAAAGAAGTCGGAAGCAGATTCAATGAGCTGCCTAGCATTGCTGTGGAAAGAGGAAGCGCAAGCATGTTTGAAGGAGTAGGTGCTAGATCTGGTGGGTCGTTCGGAGGAGGTCGATCAGGCGGTGGTGGGTATGGTAGTTACGGTAGCAGCAGTGGCCGTTCAGGTGGTGGTGGTGGTAGTTATGGAGGTTCAGGGGGATCAAGCAGCCGTTACTCTGGTGGTTCAGACCGCTCATCTGGTTTCGGAAGCTTTGGTTCAGGCGGTTCTTCAGGAGGATTTGGTTCAGACCGTTCTTCTCAGTCAAGTGGAAGGAGCAGCTTTGGTGGGTTTGGATCAAACGATGGTAAAAGATCTTACTGA - >AT3G22310.1
ATGATTAGCACAGTACTTCGCCGATCTATCCTTGGTACGTCAAGGCGTACTCTCGCCGCTTCGGTGACCTCCATTAACGCAGCTCTATTTCATAACCTTGCTCCAGCCGCCGCCACAGTCTCCGATCTAGCAAATGGAGCTACTAATGTCAAGTCTCTCCCTTCGAATTCGAGCCCTTTTGGTGTTAAAGTGAGAGACTTTCATGTTAAATCTGTACCGTCGGAGTTTAGATCGTCGATTGTTTCTTCTGCGGGATTCGCGGCTCAAGAGTATGCTCCTTCTTATGAGAACGATGGAGGGATTGGAGATTCGGAGAGTGTTGGTAGCAGCGGTGGTGGTGATGGGCTTGCGATAGCTGATCTTGGTATATCTCCGGAGATTGTTAAAGCTTTGAAGGGTAGGGGTATTGAGAAACTCTTTCCTATTCAGAAAGCTGTGTTGGAGCCAGCGATGGAGGGTCGTGATATGATTGGCCGTGCAAGGACTGGAACGGGAAAGACACTTGCTTTTGGGATTCCTATTATTGACAAAATCATCAAATTCAACGCTAAACATGGTCGTGGGAAGAATCCTCAGTGCTTGGTTTTGGCACCGACGAGGGAGCTTGCTCGTCAGGTTGAGAAAGAGTTCAGGGAATCTGCTCCAAGTTTGGATACTATTTGTCTCTATGGAGGTACACCAATCGGGCAACAAATGAGGGAGCTGAACTATGGTATTGATGTGGCGGTTGGAACTCCTGGTCGTATCATTGATCTGATGAAAAGGGGAGCTTTGAATCTATCAGAGGTTCAGTTTGTGGTTCTTGATGAAGCTGATCAGATGCTTCAAGTTGGATTTGCGGAAGATGTTGAAATAATATTGCAGAAGTTGCCAGCGAAGCGTCAGAGTATGATGTTTTCTGCAACAATGCCAAGTTGGATCAGATCTCTCACCAAGAAGTACCTGAACAATCCTTTGACAATTGATCTTGTTGGAGATTCAGATCAGAAACTTGCAGATGGGATTACTATGTATTCTATCGCTGCAGATTCTTATGGAAGAGCATCCATCATTGGTCCTCTTGTAAAGGAACATGGCAAAGGAGGAAAATGCATTGTCTTTACCCAAACAAAACGTGATGCAGATCGCCTTGCATTTGGATTGGCAAAAAGCTATAAATGTGAAGCTTTACACGGTGACATATCTCAAGCTCAGAGAGAAAGAACACTTGCTGGTTTCAGGGATGGGAATTTCAGTATTCTTGTTGCAACTGATGTTGCTGCCCGTGGACTTGATGTACCTAATGTCGATTTAGTAATTCATTATGAGCTTCCTAATAACACGGAGACGTTTGTTCACCGAACGGGGCGAACTGGTCGTGCTGGAAAGAAAGGAAGCGCGATTCTCATCCACGGTCAAGATCAAACCAGGGCTGTTAAAATGATTGAGAAAGAAGTCGGAAGCAGATTCAATGAGCTGCCTAGCATTGCTGTGGAAAGAGGAAGCGCAAGCATGTTTGAAGGAGTAGGTGCTAGATCTGGTGGGTCGTTCGGAGGAGGTCGATCAGGCGGTGGTGGGTATGGTAGTTACGGTAGCAGCAGTGGCCGTTCAGGTGGTGGTGGTGGTAGTTATGGAGGTTCAGGGGGATCAAGCAGCCGTTACTCTGGTGGTTCAGACCGCTCATCTGGTTTCGGAAGCTTTGGTTCAGGCGGTTCTTCAGGAGGATTTGGTTCAGACCGTTCTTCTCAGTCAAGTGGAAGGAGCAGCTTTGGTGGGTTTGGATCAAACGATGGTAAAAGATCTTACTGA
Protein Sequence
- >AT3G22310.2
MISTVLRRSILGTSRRTLAASVTSINAALFHNLAPAAATVSDLANGATNVKSLPSNSSPFGVKVRDFHVKSVPSEFRSSIVSSAGFAAQEYAPSYENDGGIGDSESVGSSGGGDGLAIADLGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKFNAKHGRGKNPQCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQQMRELNYGIDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAKRQSMMFSATMPSWIRSLTKKYLNNPLTIDLVGDSDQKLADGITMYSIAADSYGRASIIGPLVKEHGKGGKCIVFTQTKRDADRLAFGLAKSYKCEALHGDISQAQRERTLAGFRDGNFSILVATDVAARGLDVPNVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAILIHGQDQTRAVKMIEKEVGSRFNELPSIAVERGSASMFEGVGARSGGSFGGGRSGGGGYGSYGSSSGRSGGGGGSYGGSGGSSSRYSGGSDRSSGFGSFGSGGSSGGFGSDRSSQSSGRSSFGGFGSNDGKRSY - >AT3G22310.1
MISTVLRRSILGTSRRTLAASVTSINAALFHNLAPAAATVSDLANGATNVKSLPSNSSPFGVKVRDFHVKSVPSEFRSSIVSSAGFAAQEYAPSYENDGGIGDSESVGSSGGGDGLAIADLGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKFNAKHGRGKNPQCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQQMRELNYGIDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAKRQSMMFSATMPSWIRSLTKKYLNNPLTIDLVGDSDQKLADGITMYSIAADSYGRASIIGPLVKEHGKGGKCIVFTQTKRDADRLAFGLAKSYKCEALHGDISQAQRERTLAGFRDGNFSILVATDVAARGLDVPNVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAILIHGQDQTRAVKMIEKEVGSRFNELPSIAVERGSASMFEGVGARSGGSFGGGRSGGGGYGSYGSSSGRSGGGGGSYGGSGGSSSRYSGGSDRSSGFGSFGSGGSSGGFGSDRSSQSSGRSSFGGFGSNDGKRSY