Gene Details:
- Gene ID: AT3G21890
- Gene Symbol: BBX31, miP1a
- Gene Name: B-box domain protein 31, microProtein 1a
- Description: B-box type zinc finger family protein;(source:Araport11)
- TAIR Accession: locus:2095562
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Gene Ontology:
- GO:0048586 — involved in — regulation of long-day photoperiodism, flowering
- GO:0006355 — acts upstream of or within — regulation of DNA-templated transcription
- GO:0009909 — involved in — regulation of flower development
- GO:0010224 — acts upstream of or within — response to UV-B
- GO:0000976 — enables — transcription cis-regulatory region binding
- GO:0005634 — located in — nucleus
- GO:0043565 — enables — sequence-specific DNA binding
- GO:0003700 — enables — DNA-binding transcription factor activity
- GO:0007623 — involved in — circadian rhythm
- GO:0030674 — enables — protein-macromolecule adaptor activity
- GO:0008270 — enables — zinc ion binding
Function-related keywords:
- leaf lamina base , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , hypocotyl , collective leaf structure , pollen
Literature:
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Genome-wide analysis of gene expression reveals function of the bZIP transcription factor HY5 in the UV-B response of Arabidopsis. DOI: 10.1073/pnas.0308044100 ; PMID: 14739338
- Biosynthesis of cellulose-enriched tension wood in Populus: global analysis of transcripts and metabolites identifies biochemical and developmental regulators in secondary wall biosynthesis. DOI: 10.1111/j.1365-313X.2005.02584.x ; PMID: 16367961
- Analysis of transcription factor HY5 genomic binding sites revealed its hierarchical role in light regulation of development. DOI: 10.1105/tpc.106.047688 ; PMID: 17337630
- Global transcript levels respond to small changes of the carbon status during progressive exhaustion of carbohydrates in Arabidopsis rosettes. DOI: 10.1104/pp.107.115592 ; PMID: 18305208
- Identification of a novel cis-regulatory element for UV-B-induced transcription in Arabidopsis. DOI: 10.1111/j.1365-313X.2008.03435.x ; PMID: 18266923
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- The Arabidopsis B-box zinc finger family. DOI: 10.1105/tpc.109.069088 ; PMID: 19920209
- Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. DOI: 10.1186/1471-2229-13-229 ; PMID: 24377444
- An Arabidopsis gene regulatory network for secondary cell wall synthesis. DOI: 10.1038/nature14099 ; PMID: 25533953
- MicroProtein-Mediated Recruitment of CONSTANS into a TOPLESS Trimeric Complex Represses Flowering in Arabidopsis. DOI: 10.1371/journal.pgen.1005959 ; PMID: 27015278
- Nitric oxide responses in Arabidopsis hypocotyls are mediated by diverse phytohormone pathways. DOI: 10.1093/jxb/ery286 ; PMID: 30085082
- A PXY-Mediated Transcriptional Network Integrates Signaling Mechanisms to Control Vascular Development in Arabidopsis. DOI: 10.1105/tpc.19.00562 ; PMID: 31806676
- A microProtein repressor complex in the shoot meristem controls the transition to flowering. DOI: 10.1093/plphys/kiab235 ; PMID: 34015131
- FIONA1-mediated methylation of the 3'UTR of FLC affects FLC transcript levels and flowering in Arabidopsis. DOI: 10.1371/journal.pgen.1010386 ; PMID: 36166469
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
Sequences:
cDNA Sequence
- >AT3G21890.1
CCAATATGAGGTCGAGAGATCGCTTGGAGGAGAAGCGTTTTTAATTTTGAAATTAACGATTTTGCCCTCATAAGGGCATTTACGTCAAAATAACAGGGCAAGATTCATCCACGTGTCCAACAACAACACAACACAAACACATCATTAGTTTTAAAGAAATAAGATTCCTATATAAATGTATAAACGTTTCTCCTATTCCCAAATCTTCTTTCCTCAATATCACCCAGAAGAAAGAGAAAGTGAAACAGATCAAGAAAGAGATTGAGAAAAATGTGTAGAGGCTTGAATAATGAAGAGAGCAGAAGAAGTGACGGAGGAGGTTGCCGGAGTCTCTGCACGAGACCGAGTGTTCCGGTAAGGTGTGAGCTTTGCGACGGAGACGCCTCCGTGTTCTGTGAAGCGGACTCGGCGTTCCTCTGTAGAAAATGTGACCGGTGGGTTCATGGAGCGAATTTTCTAGCTTGGAGACACGTAAGGCGCGTGCTATGCACTTCTTGTCAGAAACTCACGCGCCGGTGCCTCGTCGGAGATCATGACTTCCACGTTGTTTTACCGTCGGTGACGACGGTCGGAGAAACCACCGTGGAGAATAGAAGTGAACAAGATAATCATGAGGTTCCGTTTGTTTTTCTCTGATTATTAGATTTTTTTGGTGTAAGCTATAAATATTCTAGGGTTTTTATGCAATTTTCTTTTAAGAAAAATCTGAAAATTTTAATTTTATGAAGCTTAGAATTTTAAGAAATGTGTAATGAAAAAAAAAAAAGAATTTTAAGAAATGGGTAGTGACTAAAAATAGCAAAAAATATCTGCAATAGAAAGGGAAGAAACAAGGATCGTTTGTTGTTATTGAGTTATTCTTCGAATCTTTTGCTTTTTTCTACTAAGCAATGTTTGTAACCAACAAACAAAAAGTTCCATAAAACTGCTGTAAAAAAAAATTAACTCACCAAACTCTCTGTTTGGTATTTTGTTAGATATTTATTTTAGTGTAGTAAATCTTTCTCACTACTTCTTTGGACTTGTCATTTTCCTTAATTTAAAGGTACATAAAAGCAACTCCAGCCTTGTATTCTTAGCAATAAAAGTGATTAAATTTAA
CDS Sequence
- >AT3G21890.1
ATGTGTAGAGGCTTGAATAATGAAGAGAGCAGAAGAAGTGACGGAGGAGGTTGCCGGAGTCTCTGCACGAGACCGAGTGTTCCGGTAAGGTGTGAGCTTTGCGACGGAGACGCCTCCGTGTTCTGTGAAGCGGACTCGGCGTTCCTCTGTAGAAAATGTGACCGGTGGGTTCATGGAGCGAATTTTCTAGCTTGGAGACACGTAAGGCGCGTGCTATGCACTTCTTGTCAGAAACTCACGCGCCGGTGCCTCGTCGGAGATCATGACTTCCACGTTGTTTTACCGTCGGTGACGACGGTCGGAGAAACCACCGTGGAGAATAGAAGTGAACAAGATAATCATGAGGTTCCGTTTGTTTTTCTCTGA
Protein Sequence
- >AT3G21890.1
MCRGLNNEESRRSDGGGCRSLCTRPSVPVRCELCDGDASVFCEADSAFLCRKCDRWVHGANFLAWRHVRRVLCTSCQKLTRRCLVGDHDFHVVLPSVTTVGETTVENRSEQDNHEVPFVFL