Information report for AT3G21865
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
- GO:0005515 — enables — protein binding
- GO:0005739 — located in — mitochondrion
- GO:0007031 — acts upstream of or within — peroxisome organization
Functional Keywords
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , guard cell
Literature and News
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Functional classification of Arabidopsis peroxisome biogenesis factors proposed from analyses of knockdown mutants. DOI: 10.1093/pcp/pcm053 ; PMID: 17478547
- Comparative mapping of Brassica juncea and Arabidopsis thaliana using Intron Polymorphism (IP) markers: homoeologous relationships, diversification and evolution of the A, B and C Brassica genomes. DOI: 10.1186/1471-2164-9-113 ; PMID: 18315867
- Peroxisome-associated matrix protein degradation in Arabidopsis. DOI: 10.1073/pnas.0811329106 ; PMID: 19246395
- Identification and functional characterization of Arabidopsis PEROXIN4 and the interacting protein PEROXIN22. DOI: 10.1105/tpc.105.035691 ; PMID: 16272432
Gene Resources
- UniProt: A0A178VH76
- EMBL: CACSHJ010000089, LUHQ01000003
- AlphaFoldDB: A0A178VH76
- EnsemblPlants: AT3G21865.1
- Gramene: AT3G21865.1
- KEGG: ath:AT3G21865
- Orthologous matrix: TAPNVFC
- ExpressionAtlas: AT3G21865
- InterPro: IPR037485
- PANTHER: PTHR34126, PTHR34126:SF1
- OrthoDB: A0A178VH76
- SWISS-MODEL: A0A178VH76
Homologs
- Lactuca sativa gene-LSAT_6X102801
Sequences
cDNA Sequence
- >AT3G21865.1
CAAAACGCACCGTTTCGTACAGATCAGATCCATCGCACCCTATGATAAAAAACAATGGTCTCACACGCTCATCCACCACCACGTGTTTAACAAGACACGTGTCCAAACAAATTGACTTTGCCTAGTTGTGTTCTAATGGAAAAGTAAAATTCCTCTTTTCTCTCTTAGTTCAGGGAGGAGGCTCGAGAACAGTGCCCCATATCTGAAAGCTGAAGCTAAGAATCTGGACGTTCGTGTTTAAACCGACGACGTATTTGAAATTGGCTTTGAAGGAAAGGTGAAATTAATGGCGGAATCGTCGTCGCCGTCGCCTACTGAAGAGATCGTTCGGTTGATTAAGCGTTTAAGCGCTTACGTTGCTTTCAAAATGTCAAGCCTTTTCTCCACTACATCGATTCGAAATCTGGATTCAAGATCAATTGGTGCGATTGCGGGGCTTGCGATTGCGGTGATATTTACGTGGAGGGCGATAAGAACGCCCGGAGAGCAACGTCAGAGAAGGCAGCCGAAGCGTAGGATTCACAATGCTGAAACGTCTAGTGCTGCTGCTGCTGCTTCTCAGTCGAATCTAGCTTCTTCGGTTGCTCCGGAAGTTTCTTCGCCTCGTGAGGATAATGCGGTGCAAGATGTTGTTGATCAGTTCTTTCAACCTGTTAAACCTACTTTGGGGCAAATAGTTAGACAGAAGCTTAGTGAAGGAAGGAAGGTAACATGCCGTCTTCTTGGAGTAATTCTTGAGGAAACAAGTCCAGAAGAACTCCAAAAACAAGCCACAGTGAGGTCATCTGTTTTGGAAGTTCTACTAGAGATTACAAAGTATAGTGATTTGTATCTTATGGAAAGAGTTCTTGACGATGAAAGCGAGGCCAAAGTTTTACAGGCTTTAGAGAATGCAGGAGTTTTTACATCTGGTGGTTTAGTCAAAGATAAGGTGCTCTTTTGTAGTACAGAGATAGGAAGAACTTCCTTTGTCAGACAGCTAGAACCTGACTGGCATATTGATACAAACCCGGAAATCAGCACACAACTAGCTAGGTTCATCAAATATCAGCTTCATGTCGCTACGGTGAAACCCGAGCGAACAGCTCCAAATGTGTTCACCTCGCAGTCAATAGAACAGTTCTTTGGAAGTGTTTAATATCAACAAAAAAAGAGAGGTGAAAGATATTACGTTGTCCTGACTTAAGCATCGTTGATCGAGTGTCTCTTAGGCTGAAACTTGAAACTTGTTTTTCATTTTTCTTTGATTGTGTCTAAATTAAAGTTTGATATACATTTGGAGTTAGATATTACTGCGAGTGCCTCTGTGAAAGTATCCAAGTTTGTAATTTTTGTATTAGCAACTTAGCAAAATTCTTTAAGAAATAAACAAATGTCCGTTGTTTAGTCATTAGTTCATCGACGAAGTGTGGATTAGTTCTATATCGAAATGCTTAAAGAAAA
CDS Sequence
- >AT3G21865.1
ATGGCGGAATCGTCGTCGCCGTCGCCTACTGAAGAGATCGTTCGGTTGATTAAGCGTTTAAGCGCTTACGTTGCTTTCAAAATGTCAAGCCTTTTCTCCACTACATCGATTCGAAATCTGGATTCAAGATCAATTGGTGCGATTGCGGGGCTTGCGATTGCGGTGATATTTACGTGGAGGGCGATAAGAACGCCCGGAGAGCAACGTCAGAGAAGGCAGCCGAAGCGTAGGATTCACAATGCTGAAACGTCTAGTGCTGCTGCTGCTGCTTCTCAGTCGAATCTAGCTTCTTCGGTTGCTCCGGAAGTTTCTTCGCCTCGTGAGGATAATGCGGTGCAAGATGTTGTTGATCAGTTCTTTCAACCTGTTAAACCTACTTTGGGGCAAATAGTTAGACAGAAGCTTAGTGAAGGAAGGAAGGTAACATGCCGTCTTCTTGGAGTAATTCTTGAGGAAACAAGTCCAGAAGAACTCCAAAAACAAGCCACAGTGAGGTCATCTGTTTTGGAAGTTCTACTAGAGATTACAAAGTATAGTGATTTGTATCTTATGGAAAGAGTTCTTGACGATGAAAGCGAGGCCAAAGTTTTACAGGCTTTAGAGAATGCAGGAGTTTTTACATCTGGTGGTTTAGTCAAAGATAAGGTGCTCTTTTGTAGTACAGAGATAGGAAGAACTTCCTTTGTCAGACAGCTAGAACCTGACTGGCATATTGATACAAACCCGGAAATCAGCACACAACTAGCTAGGTTCATCAAATATCAGCTTCATGTCGCTACGGTGAAACCCGAGCGAACAGCTCCAAATGTGTTCACCTCGCAGTCAATAGAACAGTTCTTTGGAAGTGTTTAA
Protein Sequence
- >AT3G21865.1
MAESSSPSPTEEIVRLIKRLSAYVAFKMSSLFSTTSIRNLDSRSIGAIAGLAIAVIFTWRAIRTPGEQRQRRQPKRRIHNAETSSAAAAASQSNLASSVAPEVSSPREDNAVQDVVDQFFQPVKPTLGQIVRQKLSEGRKVTCRLLGVILEETSPEELQKQATVRSSVLEVLLEITKYSDLYLMERVLDDESEAKVLQALENAGVFTSGGLVKDKVLFCSTEIGRTSFVRQLEPDWHIDTNPEISTQLARFIKYQLHVATVKPERTAPNVFTSQSIEQFFGSV