Gene Details:
- Gene ID: AT3G21860
- Gene Symbol: ASK10, SK10
- Gene Name: SKP1-like 10, SKP1-like 10
- Description: SKP1-like 10;(source:Araport11)
- TAIR Accession: locus:2093094
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000003 — whole plant — planta entera (Spanish, exact), 植物体全体 (Japanese, exact), clonal colony (related), colony (related), bush (narrow), frutex (narrow), frutices (narrow), gametophyte (narrow), herb (narrow), liana (narrow), prothalli (narrow), prothallium (narrow), prothallus (narrow), seedling (narrow), shrub (narrow), sporophyte (narrow), suffrutex (narrow), suffrutices (narrow), tree (narrow), vine (narrow), woody clump (narrow), genet (broad), ramet (broad)
Gene Ontology:
- GO:0019005 — part of — SCF ubiquitin ligase complex
- GO:0031146 — involved in — SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
- GO:0006511 — acts upstream of or within — ubiquitin-dependent protein catabolic process
- GO:0005634 — located in — nucleus
- GO:0005634 — is active in — nucleus
- GO:0005515 — enables — protein binding
- GO:0005737 — is active in — cytoplasm
- GO:0097602 — enables — cullin family protein binding
Function-related keywords:
Literature:
- SKP1-SnRK protein kinase interactions mediate proteasomal binding of a plant SCF ubiquitin ligase. DOI: 10.1093/emboj/20.11.2742 ; PMID: 11387208
- Protein interaction analysis of SCF ubiquitin E3 ligase subunits from Arabidopsis. DOI: 10.1046/j.1365-313x.2003.01768.x ; PMID: 12795696
- The Arabidopsis SKP1-like genes present a spectrum of expression profiles. DOI: 10.1023/a:1025056008926 ; PMID: 13677462
- Members of the Arabidopsis-SKP1-like gene family exhibit a variety of expression patterns and may play diverse roles in Arabidopsis. DOI: 10.1104/pp.103.024703 ; PMID: 12970487
- Expression and interaction analysis of Arabidopsis Skp1-related genes. DOI: 10.1093/pcp/pch009 ; PMID: 14749489
- Molecular evolution and selection patterns of plant F-box proteins with C-terminal kelch repeats. DOI: 10.1104/pp.110.166579 ; PMID: 21119043
- A comprehensive analysis of interaction and localization of Arabidopsis SKP1-like (ASK) and F-box (FBX) proteins. DOI: 10.1371/journal.pone.0050009 ; PMID: 23166809
- The SKP1-like gene family of Arabidopsis exhibits a high degree of differential gene expression and gene product interaction during development. DOI: 10.1371/journal.pone.0050984 ; PMID: 23226441
- F-box protein RAE1 regulates the stability of the aluminum-resistance transcription factor STOP1 in Arabidopsis. DOI: 10.1073/pnas.1814426116 ; PMID: 30559192
Sequences:
cDNA Sequence
- >AT3G21860.1
AACATCAACATGAGTAGACATAAAACTTCAAGCTTTCGTGACTTGCTTGACACGATACATGCATCTATGAAAATTATTAGGGCTTATTAATAGACAAACGCATAGGTTCATAACTTCATTACCTTATTACTGAAATCCTTCTCTCAATTCTCAATCATTTTCTCAATTCTTCAATCTTCCAGAGAAAAAATCTCCCCCCAGCGAAAAAATAATGTCGACGAAGAAGATCATATTGAAGAGCTCCGATGGTCACTCATTCGAGGTCGAAGAAGAGGCCGCATGCCAATGCCAGACCATAGCTCATATGAGTGAAGACGATTGTACCGATAATGGAATCCCGCTTCCAGAAGTGACAGGCAAGATTCTTGAGATGGTGATCGAGTACTGCAACAAGCACCACGTCGATGCCGCTAATCCTTGCTCCGACGAGGATCTCAAGAAGTGGGACAAGGAATTCATGGAAAAATATCAATCCACGATCTTTGATCTCATTATGGCTGCGAATTACCTAAACATCAAAAGCCTTCTTGATCTAGCATGCCAAACCGTCGCGGATATGATCAAAGACAACACTGTGGAGCACACTCGCAAATTCTTCAACATTGAGAATGATTATACACATGAGGAAGAAGAAGCGGTTCGTAGGGAGAATCAATGGGGTTTTGAATGAGCGGGTGAAGCAAACACTAAGCAGCTTTCTTTCTTTTCTTTCTTCTTTAGTGTG
CDS Sequence
- >AT3G21860.1
ATGTCGACGAAGAAGATCATATTGAAGAGCTCCGATGGTCACTCATTCGAGGTCGAAGAAGAGGCCGCATGCCAATGCCAGACCATAGCTCATATGAGTGAAGACGATTGTACCGATAATGGAATCCCGCTTCCAGAAGTGACAGGCAAGATTCTTGAGATGGTGATCGAGTACTGCAACAAGCACCACGTCGATGCCGCTAATCCTTGCTCCGACGAGGATCTCAAGAAGTGGGACAAGGAATTCATGGAAAAATATCAATCCACGATCTTTGATCTCATTATGGCTGCGAATTACCTAAACATCAAAAGCCTTCTTGATCTAGCATGCCAAACCGTCGCGGATATGATCAAAGACAACACTGTGGAGCACACTCGCAAATTCTTCAACATTGAGAATGATTATACACATGAGGAAGAAGAAGCGGTTCGTAGGGAGAATCAATGGGGTTTTGAATGA
Protein Sequence
- >AT3G21860.1
MSTKKIILKSSDGHSFEVEEEAACQCQTIAHMSEDDCTDNGIPLPEVTGKILEMVIEYCNKHHVDAANPCSDEDLKKWDKEFMEKYQSTIFDLIMAANYLNIKSLLDLACQTVADMIKDNTVEHTRKFFNIENDYTHEEEEAVRRENQWGFE