Information report for AT3G21820
Gene Details
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Functional Descriptions
- GO:0040029 — acts upstream of or within positive effect — epigenetic regulation of gene expression
- GO:0046975 — enables — histone H3K36 methyltransferase activity
- GO:0062211 — acts upstream of or within positive effect — root regeneration
- GO:0005634 — located in — nucleus
- GO:0010311 — acts upstream of or within positive effect — lateral root formation
- GO:0005515 — enables — protein binding
- GO:1990110 — acts upstream of or within — callus formation
- GO:0005634 — is active in — nucleus
Functional Keywords
Literature and News
- Comparative analysis of SET domain proteins in maize and Arabidopsis reveals multiple duplications preceding the divergence of monocots and dicots. DOI: 10.1104/pp.102.013722 ; PMID: 12805620
- A transcriptome-based characterization of habituation in plant tissue culture. DOI: 10.1104/pp.105.076059 ; PMID: 16489130
- Arabidopsis ATXR2 deposits H3K36me3 at the promoters of LBD genes to facilitate cellular dedifferentiation. DOI: 10.1126/scisignal.aan0316 ; PMID: 29184030
- JMJ30-mediated demethylation of H3K9me3 drives tissue identity changes to promote callus formation in Arabidopsis. DOI: 10.1111/tpj.14002 ; PMID: 29923261
- Arabidopsis ATXR2 represses de novo shoot organogenesis in the transition from callus to shoot formation. DOI: 10.1016/j.celrep.2021.109980 ; PMID: 34758306
Gene Resources
Homologs
- Arachis hypogaea arahy.Tifrunner.gnm1.ann1.I8ZYWJ
Sequences
cDNA Sequence
- >AT3G21820.1
GGATCCGGCTCGGGTCATCCATCTCAACTCCAAAGAGTCTATCTGGTCCTTCCGGACCCAAACAGTCAAAATAGCACCAAATTAAAAACACAGACGCGCCGCCGTACGAGAAAATCTCCGGCTATGGATTCCGTTTACAAAACCGACGAAAACTTCGCCGCGGATGTCGCCGCTCTTCTTGCTCCGCTTCCAACTCCCCAACTTCAGGAGTATTTCAACAAGCTTATAACTAGTAGAAGATGCAATGGAATTGAAGTGAAAAACAATGGAACCATTGGAAAAGGTGTTTATGCAAATTCAGAGTTTGACGAAGATGAACTCATTTTGAAAGATGAGATTCTTGTTGGTATCCAACATTCTTCCAACAAGGTGGATTGTTTAGTTTGCAGTTTTTGTTTCCGGTTCATTGGATCAATCGAGAAACAAATCGGCAGGAAACTCTATTTCAAGAATCTCGGTGTCTCTGGTTGTTGTGACGACGATTCATCCGAAGAAGATGAATGTGTGAAGTACAATGGAAATGAGGAACAATGTGGTGGAAGCAGTTCAAGCCATAATACTCTTCCAGAAGGAGTTGTTAGTTCTTTGATGAATGGTGAAATGGCATTGCCGCATACTGATAAGTTTCCTTTGCCGTCGCCTCTTTCGTGTCCTGGAGGATGTCAGGAGGCTTTCTACTGCAGTGAATCATGCGCAGCGGCAGATTGGGAGAGTTCTCATTCCTTACTTTGTACTGGTGAGAGGTCTGAATCAATATCTAGAGAGGCGCTTGGAGAGTTTATTAAACATGCTAATGATACCAATGATATTTTTCTCCTGGCTGCGAAGGCAATCGCCTTTACCATTCTAAGGTACAGGAAACTGAAAGCAGAACATGTGGACAAAAAAGCGAAACAGAGTGAGCCAAAGCAGTCGCTTCTCTTGGAAGCATGGAAACCAGTATCGATTGGATACAAAAGAAGGTGGTGGGACTGCATTGCATTGCCAGATGATGTTGATCCTACTGATGAAGGAGCCTTCAGGATGCAAATAAAGAACCTTGCGTGTACGTCTTTGGAGCTCCTGAAGATAGCCATATTTGACAAAGAATGTGAAGCCCTGTTCTCCCTCGAAATCTATGGGAATATCATCGGCATGTTTGAGCTGAATAACCTAGACTTGGTGGTAGCATCACCAGTAGAGGACTATTTCTTGTATATTGATGATCTTCCTGATGCAGAAAAGGAAGAAACCGAGGAAATCACAAGACCGTTTCTAGATGCTCTTGGTGATGAGTACTCGGACTGTTGCCAAGGAACGGCCTTCTTCCCTCTGCAAAGCTGTATGAACCATTCTTGTTGCCCTAATGCAAAAGCCTTCAAAAGAGAAGAGGACAGAGACGGACAAGCAGTGATAATTGCATTAAGACGCATCAGCAAGAACGAAGAGGTGACGATTTCATATATCGACGAGGAGCTTCCATACAAAGAGAGACAAGCATTACTTGCAGACTATGGTTTCAGCTGCAAGTGCTCTAAGTGTCTTGAAGATTCTTCATCAATTTGAAGCATAATTTTTGTTTTCAAAAGAACAGAAATTTTCAATTTTGCCTATATAGTGATTACACTGGAAATCACTACTGAAATAAAGAGTATGGCGTTAGTTTCTCTACGCAACATTGAAACAATAAAAGGACATCTTCGTTTGAAGATCAAGCTTTAGTTCTTTTTCAATATATATCTAAAGATGATGAACAAAGCA
CDS Sequence
- >AT3G21820.1
ATGGATTCCGTTTACAAAACCGACGAAAACTTCGCCGCGGATGTCGCCGCTCTTCTTGCTCCGCTTCCAACTCCCCAACTTCAGGAGTATTTCAACAAGCTTATAACTAGTAGAAGATGCAATGGAATTGAAGTGAAAAACAATGGAACCATTGGAAAAGGTGTTTATGCAAATTCAGAGTTTGACGAAGATGAACTCATTTTGAAAGATGAGATTCTTGTTGGTATCCAACATTCTTCCAACAAGGTGGATTGTTTAGTTTGCAGTTTTTGTTTCCGGTTCATTGGATCAATCGAGAAACAAATCGGCAGGAAACTCTATTTCAAGAATCTCGGTGTCTCTGGTTGTTGTGACGACGATTCATCCGAAGAAGATGAATGTGTGAAGTACAATGGAAATGAGGAACAATGTGGTGGAAGCAGTTCAAGCCATAATACTCTTCCAGAAGGAGTTGTTAGTTCTTTGATGAATGGTGAAATGGCATTGCCGCATACTGATAAGTTTCCTTTGCCGTCGCCTCTTTCGTGTCCTGGAGGATGTCAGGAGGCTTTCTACTGCAGTGAATCATGCGCAGCGGCAGATTGGGAGAGTTCTCATTCCTTACTTTGTACTGGTGAGAGGTCTGAATCAATATCTAGAGAGGCGCTTGGAGAGTTTATTAAACATGCTAATGATACCAATGATATTTTTCTCCTGGCTGCGAAGGCAATCGCCTTTACCATTCTAAGGTACAGGAAACTGAAAGCAGAACATGTGGACAAAAAAGCGAAACAGAGTGAGCCAAAGCAGTCGCTTCTCTTGGAAGCATGGAAACCAGTATCGATTGGATACAAAAGAAGGTGGTGGGACTGCATTGCATTGCCAGATGATGTTGATCCTACTGATGAAGGAGCCTTCAGGATGCAAATAAAGAACCTTGCGTGTACGTCTTTGGAGCTCCTGAAGATAGCCATATTTGACAAAGAATGTGAAGCCCTGTTCTCCCTCGAAATCTATGGGAATATCATCGGCATGTTTGAGCTGAATAACCTAGACTTGGTGGTAGCATCACCAGTAGAGGACTATTTCTTGTATATTGATGATCTTCCTGATGCAGAAAAGGAAGAAACCGAGGAAATCACAAGACCGTTTCTAGATGCTCTTGGTGATGAGTACTCGGACTGTTGCCAAGGAACGGCCTTCTTCCCTCTGCAAAGCTGTATGAACCATTCTTGTTGCCCTAATGCAAAAGCCTTCAAAAGAGAAGAGGACAGAGACGGACAAGCAGTGATAATTGCATTAAGACGCATCAGCAAGAACGAAGAGGTGACGATTTCATATATCGACGAGGAGCTTCCATACAAAGAGAGACAAGCATTACTTGCAGACTATGGTTTCAGCTGCAAGTGCTCTAAGTGTCTTGAAGATTCTTCATCAATTTGA
Protein Sequence
- >AT3G21820.1
MDSVYKTDENFAADVAALLAPLPTPQLQEYFNKLITSRRCNGIEVKNNGTIGKGVYANSEFDEDELILKDEILVGIQHSSNKVDCLVCSFCFRFIGSIEKQIGRKLYFKNLGVSGCCDDDSSEEDECVKYNGNEEQCGGSSSSHNTLPEGVVSSLMNGEMALPHTDKFPLPSPLSCPGGCQEAFYCSESCAAADWESSHSLLCTGERSESISREALGEFIKHANDTNDIFLLAAKAIAFTILRYRKLKAEHVDKKAKQSEPKQSLLLEAWKPVSIGYKRRWWDCIALPDDVDPTDEGAFRMQIKNLACTSLELLKIAIFDKECEALFSLEIYGNIIGMFELNNLDLVVASPVEDYFLYIDDLPDAEKEETEEITRPFLDALGDEYSDCCQGTAFFPLQSCMNHSCCPNAKAFKREEDRDGQAVIIALRRISKNEEVTISYIDEELPYKERQALLADYGFSCKCSKCLEDSSSI