Gene Details:
- Gene ID: AT3G21710
- Gene Symbol: VUP1
- Gene Name: VASCULAR-RELATED UNKNOWN PROTEIN 1
- Description: transmembrane protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Function-related keywords:
Literature:
- Transcriptional profiling by cDNA-AFLP and microarray analysis reveals novel insights into the early response to ethylene in Arabidopsis. DOI: 10.1111/j.1365-313X.2004.02156.x ; PMID: 15272873
- DNA rearrangement in orthologous orp regions of the maize, rice and sorghum genomes. DOI: 10.1534/genetics.105.040915 ; PMID: 15834137
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptional dynamics of two seed compartments with opposing roles in Arabidopsis seed germination. DOI: 10.1104/pp.113.223511 ; PMID: 23858430
- Arabidopsis VASCULAR-RELATED UNKNOWN PROTEIN1 regulates xylem development and growth by a conserved mechanism that modulates hormone signaling. DOI: 10.1104/pp.114.236406 ; PMID: 24567189
Sequences:
cDNA Sequence
- >AT3G21710.2
ATACACAACGCAACCACTTAAGAATTATTCCATTTTTATTTGGCTTATTCCTTCCTCCCTCTACATGATGGATACATTCTCTTGTAATTCTTATGAACAAAACCACCCCCATGATGATGATATTGATATTGATGCTCATGATCATGATTCTCATGGTGGTGATCATCAAGAGGAGAGTGGATGGACAACTTATCTTGATGATTTCTCAAATCAATATAGAACTACTCATCATGAAGAAAATGATCATCAAGACAAGAGTTCTTATTCACTTCTTGCCACCTCTACTTCTCTGGTCTCTGACGCCGCCACCCATGCCTTTTCCGGCAAGAGTTTTCCCGTTAATTTTCCGGCGAAACTGAAGTTTGGGAGGGGAAGAACCAAAAAGATTTGTGAGGATGATTCTTTGGAGGACACGGCTAGCTCTCCGGTCAACAGCCCTAAGGTCAGTCACTTTGAACATATTCAGACGCCTCCTAGAAAAATTGAGGACTATGTCTCTTCTAGTTTCGTTATGGGAAATATTAGAGGCATGGGGGATCATCAAATCCAAATACAAGAAGGTGGTGAACAAAAAGTGACGCTGATGAGAAATCTCATTGACGGAAACAACAACAACAACAACAACAATATGGATTTGAGGAGTAGAGGATTATGCGTCGTCCCTATCTCCATGTTGGCTAATTTTAACGGTCGCTGCTGAATAATGATAATCAATTCTATAAACATCCTTAATTAACTATATAAACCCTTGTAAATTTGGTGGTGTTTATATTCGTACCTATCTTGTATATATGTACTTGATGTGTGTATATATGTACATCTTGATGGGTATGTGCTTTACATATATATGTATAGCTTTCGTGTACATATATAAAACACATCGGTGGATATGTGTAAAGTACGACGTCTATGTTTGCAAACATTTTCTAAGAGCTACTATATCATAAACTTTATGAAAGTTTTCCAAATACACACATGATTATTTATAGAGATCTCTTATTTATATCTCTATATTGAGAGATATTTTTTTGTTGGTATAAAGTTTGAGAGATTAATACCTA - >AT3G21710.1
ATACACAACGCAACCACTTAAGAATTATTCCATTTTTATTTGGCTTATTCCTTCCTCCCTCTACATGATGGATACATTCTCTTGTAATTCTTATGAACAAAACCACCCCCATGATGATGATATTGATATTGATGCTCATGATCATGATTCTCATGGTGGTGATCATCAAGAGGAGAGTGGATGGACAACTTATCTTGATGATTTCTCAAATCAATATAGAACTACTCATCATGAAGAAAATGATCATCAAGACAAGAGTTCTTATTCACTTCTTGCCACCTCTACTTCTCTGGTCTCTGACGCCGCCACCCATGCCTTTTCCGGCAAGAGTTTTCCCGTTAATTTTCCGGCGAAACTGAAGTTTGGGAGGGGAAGAACCAAAAAGATTTGTGAGGATGATTCTTTGGAGGACACGGCTAGCTCTCCGGTCAACAGCCCTAAGGTCAGTCACTTTGAACATATTCAGACGCCTCCTAGAAAAATTGAGGACTATGTCTCTTCTAGTTTCGTTATGGGAAATATTAGAGGCATGGGGGATCATCAAATCCAAATACAAGAAGGTGGTGAACAAAAAGTGACGCTGATGAGAAATCTCATTGACGGAAACAACAACAACAACAACAACAATATGGATTTGAGGAGTAGAGGATTATGCGTCGTCCCTATCTCCATGTTGGCTAATTTTAACGGTCGCTGCTGAATAATGATAATCAATTCTATAAACATCCTTAATTAACTATATAAACCCTTGTAAATTTGGTGGTGTTTATATTCGTACCTATCTTGTATATATGTACTTGATGTGTGTATATATGTACATCTTGATGGGTATGTGCTTTACATATATATGTATAGCTTTCGTGTACATATATAAAACACATCGGTGGATATGTGTAAAGTACGACGTCTATGTTTGCAAACATTTTCTAAGAGCTACTATATCATAAACTTTATGAAAGTTTTCCAAATACACACATGATTATTTATAGAGATCTCTTATTTATATCTCTATATTGAGAGATATTTTTTTGTTGGTATAAAGTTTGAGAGATTAATACCTA
CDS Sequence
- >AT3G21710.2
ATGATGGATACATTCTCTTGTAATTCTTATGAACAAAACCACCCCCATGATGATGATATTGATATTGATGCTCATGATCATGATTCTCATGGTGGTGATCATCAAGAGGAGAGTGGATGGACAACTTATCTTGATGATTTCTCAAATCAATATAGAACTACTCATCATGAAGAAAATGATCATCAAGACAAGAGTTCTTATTCACTTCTTGCCACCTCTACTTCTCTGGTCTCTGACGCCGCCACCCATGCCTTTTCCGGCAAGAGTTTTCCCGTTAATTTTCCGGCGAAACTGAAGTTTGGGAGGGGAAGAACCAAAAAGATTTGTGAGGATGATTCTTTGGAGGACACGGCTAGCTCTCCGGTCAACAGCCCTAAGGTCAGTCACTTTGAACATATTCAGACGCCTCCTAGAAAAATTGAGGACTATGTCTCTTCTAGTTTCGTTATGGGAAATATTAGAGGCATGGGGGATCATCAAATCCAAATACAAGAAGGTGGTGAACAAAAAGTGACGCTGATGAGAAATCTCATTGACGGAAACAACAACAACAACAACAACAATATGGATTTGAGGAGTAGAGGATTATGCGTCGTCCCTATCTCCATGTTGGCTAATTTTAACGGTCGCTGCTGA - >AT3G21710.1
ATGATGGATACATTCTCTTGTAATTCTTATGAACAAAACCACCCCCATGATGATGATATTGATATTGATGCTCATGATCATGATTCTCATGGTGGTGATCATCAAGAGGAGAGTGGATGGACAACTTATCTTGATGATTTCTCAAATCAATATAGAACTACTCATCATGAAGAAAATGATCATCAAGACAAGAGTTCTTATTCACTTCTTGCCACCTCTACTTCTCTGGTCTCTGACGCCGCCACCCATGCCTTTTCCGGCAAGAGTTTTCCCGTTAATTTTCCGGCGAAACTGAAGTTTGGGAGGGGAAGAACCAAAAAGATTTGTGAGGATGATTCTTTGGAGGACACGGCTAGCTCTCCGGTCAACAGCCCTAAGGTCAGTCACTTTGAACATATTCAGACGCCTCCTAGAAAAATTGAGGACTATGTCTCTTCTAGTTTCGTTATGGGAAATATTAGAGGCATGGGGGATCATCAAATCCAAATACAAGAAGGTGGTGAACAAAAAGTGACGCTGATGAGAAATCTCATTGACGGAAACAACAACAACAACAACAACAATATGGATTTGAGGAGTAGAGGATTATGCGTCGTCCCTATCTCCATGTTGGCTAATTTTAACGGTCGCTGCTGA
Protein Sequence
- >AT3G21710.2
MMDTFSCNSYEQNHPHDDDIDIDAHDHDSHGGDHQEESGWTTYLDDFSNQYRTTHHEENDHQDKSSYSLLATSTSLVSDAATHAFSGKSFPVNFPAKLKFGRGRTKKICEDDSLEDTASSPVNSPKVSHFEHIQTPPRKIEDYVSSSFVMGNIRGMGDHQIQIQEGGEQKVTLMRNLIDGNNNNNNNNMDLRSRGLCVVPISMLANFNGRC - >AT3G21710.1
MMDTFSCNSYEQNHPHDDDIDIDAHDHDSHGGDHQEESGWTTYLDDFSNQYRTTHHEENDHQDKSSYSLLATSTSLVSDAATHAFSGKSFPVNFPAKLKFGRGRTKKICEDDSLEDTASSPVNSPKVSHFEHIQTPPRKIEDYVSSSFVMGNIRGMGDHQIQIQEGGEQKVTLMRNLIDGNNNNNNNNMDLRSRGLCVVPISMLANFNGRC