Information report for AT3G21670
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
Literature and News
- Genomic evidence for COP1 as a repressor of light-regulated gene expression and development in Arabidopsis. DOI: 10.1105/tpc.004416 ; PMID: 12368493
- Transcriptome changes for Arabidopsis in response to salt, osmotic, and cold stress. DOI: 10.1104/pp.008532 ; PMID: 12481097
- Regulation of NRT1 and NRT2 gene families of Arabidopsis thaliana: responses to nitrate provision. DOI: 10.1093/pcp/pcg036 ; PMID: 12668777
- Cross-species microarray transcript profiling reveals high constitutive expression of metal homeostasis genes in shoots of the zinc hyperaccumulator Arabidopsis halleri. DOI: 10.1046/j.1365-313x.2003.01959.x ; PMID: 14690509
- Combinatorial microarray analysis revealing arabidopsis genes implicated in cytokinin responses through the His->Asp Phosphorelay circuitry. DOI: 10.1093/pcp/pci033 ; PMID: 15695462
- Transcriptional profiling implicates novel interactions between abiotic stress and hormonal responses in Thellungiella, a close relative of Arabidopsis. DOI: 10.1104/pp.105.070508 ; PMID: 16500996
- How to decide? Different methods of calculating gene expression from short oligonucleotide array data will give different results. DOI: 10.1186/1471-2105-7-137 ; PMID: 16539732
- Transcriptome analysis of Arabidopsis clubroots indicate a key role for cytokinins in disease development. DOI: 10.1094/MPMI-19-0480 ; PMID: 16673935
- Bestatin, an inhibitor of aminopeptidases, provides a chemical genetics approach to dissect jasmonate signaling in Arabidopsis. DOI: 10.1104/pp.106.080390 ; PMID: 16798948
- An integrated view of gene expression and solute profiles of Arabidopsis tumors: a genome-wide approach. DOI: 10.1105/tpc.106.044743 ; PMID: 17172353
- Nitrate transporters and peptide transporters. DOI: 10.1016/j.febslet.2007.04.047 ; PMID: 17481610
- Global transcription profiling reveals differential responses to chronic nitrogen stress and putative nitrogen regulatory components in Arabidopsis. DOI: 10.1186/1471-2164-8-281 ; PMID: 17705847
- An inositol polyphosphate 5-phosphatase functions in PHOTOTROPIN1 signaling in Arabidopis by altering cytosolic Ca2+. DOI: 10.1105/tpc.107.052670 ; PMID: 18252844
- The relationship of drought-related gene expression in Arabidopsis thaliana to hormonal and environmental factors. DOI: 10.1093/jxb/ern155 ; PMID: 18552355
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- The Arabidopsis nitrate transporter NRT1.8 functions in nitrate removal from the xylem sap and mediates cadmium tolerance. DOI: 10.1105/tpc.110.075242 ; PMID: 20501909
- Nitrogen remobilization during leaf senescence: lessons from Arabidopsis to crops. DOI: 10.1093/jxb/erw365 ; PMID: 27707774
Gene Resources
- UniProt: A0A5S9XED8
- EMBL: CACRSJ010000106, CACSHJ010000089
- AlphaFoldDB: A0A5S9XED8
- EnsemblPlants: AT3G21670.1
- Gramene: AT3G21670.1
- KEGG: ath:AT3G21670
- Orthologous matrix: RMGRFWT
- ExpressionAtlas: AT3G21670
- InterPro: IPR000109, IPR036259
- PANTHER: PTHR11654
- SUPFAM: SSF103473
- Gene3D: 1.20.1250.20
- OrthoDB: A0A5S9XED8
- SWISS-MODEL: A0A5S9XED8
- Conserved Domain Database: cd17413
Homologs
- Brassica napus BnaC02.GTR2
- Daucus carota DCAR_025158, DCAR_025161, DCAR_025159
- Fragaria vesca mrna31023.1-v1.0-hybrid, mrna00620.1-v1.0-hybrid
- Hordeum vulgare HvNPF2.12
- Oryza sativa OsNRT1.3;NRT1.1B, OsNRT1.1A;OsNPF6.3, OsPTR7;OsNPF8.1, OsNPF7.7, OsNPF7.9, OsNPF7.1, NRT1;OsNRT1, OsNPF6.1, OsNPF7.4, OsPTR6;PTR6, OsNPF4.5, OsNPF2.2
- Triticum aestivum TaNPF2.12
Sequences
cDNA Sequence
- >AT3G21670.1
CAAAAAGCAAAGCCACATTTTATATAAAGACCCATCATATATCAATCAATCCCCATCTCTCTTCACATGCCCATTTGAATCGTATCTCCTCTCATTTCTTCTTTTGTTTTGTTGGAGTTAGATAAAATCAAAGGTCTAATAAAAGTGTCAAAACCCTTATCGCTATAACCTCCACTACCATCTTAAACTTCTCCTTATAACTCACGCTTCTCTGCTTTCTTCTCTCAGAGTCTAACTGCTCAAATAAGAAAATGGTTCATGTGTCATCATCTCATGGAGCCAAAGATGGCTCTGAAGAAGCCTATGATTACAGAGGAAACCCACCAGATAAGTCTAAAACCGGTGGATGGTTAGGCGCCGGTTTAATTTTAGGGAGCGAGCTATCAGAGAGAATATGCGTGATGGGCATATCAATGAATCTAGTGACGTACCTTGTTGGAGATTTACACATCTCATCAGCTAAATCAGCGACCATAGTCACCAACTTCATGGGAACTCTTAACCTTCTAGGGCTTCTCGGTGGTTTTTTGGCTGACGCTAAACTCGGTCGCTACAAGATGGTTGCAATCTCAGCTTCTGTCACAGCTCTGGGAGTGTTGCTTTTGACGGTGGCTACAACTATCTCAAGCATGAGACCACCAATATGTGACGATTTCAGGAGACTTCATCATCAGTGCATAGAAGCAAACGGACACCAGTTGGCTCTTCTCTATGTTGCTCTCTATACCATAGCTCTAGGCGGAGGAGGAATCAAATCCAACGTCTCTGGTTTTGGGTCTGACCAGTTCGATACTAGTGATCCTAAAGAAGAGAAACAGATGATTTTCTTCTTCAACAGATTCTATTTCTCCATCAGCGTCGGCTCTCTCTTCGCCGTGATTGCTCTTGTTTACGTTCAGGACAACGTCGGGAGAGGCTGGGGTTACGGGATCTCTGCCGCGACTATGGTGGTTGCAGCCATTGTTTTACTCTGCGGAACGAAACGGTACCGTTTCAAGAAACCTAAAGGAAGCCCTTTTACAACAATATGGAGGGTTGGTTTCTTGGCTTGGAAGAAAAGAAAGGAGAGTTACCCTGCGCATCCAAGTCTTTTGAACGGTTATGACAACACCACGGTTCCACACACAGAGATGCTTAAGTGTTTAGACAAAGCCGCAATTTCCAAGAACGAGAGCTCTCCTAGCTCGAAGGACTTCGAAGAGAAGGATCCGTGGATCGTTTCGACTGTTACACAAGTCGAAGAAGTGAAACTCGTGATGAAATTGGTACCGATTTGGGCAACGAACATTCTTTTCTGGACGATTTACTCCCAAATGACGACTTTCACGGTCGAACAAGCGACGTTTATGGACCGAAAACTCGGATCTTTCACTGTTCCTGCAGGCTCTTACTCTGCTTTCCTCATACTCACAATTCTCCTCTTCACTTCCCTTAACGAGAGAGTCTTTGTTCCTTTAACAAGAAGGCTCACAAAAAAGCCTCAAGGAATCACAAGCCTACAGAGAATCGGAGTAGGGCTAGTATTCTCAATGGCTGCAATGGCTGTAGCCGCGGTTATAGAGAACGCTAGACGCGAGGCAGCGGTTAACAACGATAAGAAAATAAGCGCGTTTTGGTTGGTTCCACAATATTTCTTAGTCGGTGCGGGTGAGGCCTTTGCTTACGTTGGACAGCTTGAGTTCTTTATAAGAGAAGCACCAGAGAGGATGAAATCGATGAGCACCGGATTGTTTCTAAGCACGATATCGATGGGATTCTTCGTGAGTAGCTTGCTTGTTTCGCTTGTTGATAGGGTTACAGACAAAAGCTGGCTTAGAAGTAACCTTAACAAAGCGAGATTGAACTACTTCTACTGGTTACTTGTTGTCTTGGGAGCATTGAACTTCTTGATTTTTATTGTGTTTGCCATGAAACATCAGTATAAAGCTGATGTGATTACTGTTGTTGTGACTGATGATGATTCAGTGGAGAAGGAAGTGACGAAGAAAGAGAGCTCTGAATTTGAGCTTAAGGACATTCCTTGAAACCAGATTTAGAAGAAGAAAAAAAACCTCTGGTTTTGTTATTTGCTTTGAAGATTTCATTTTGTCTTTGTATTTTTAGTATATTGTGTGTATGAAATAGAAAGATTACTATATGGTTTGGATTGTATTTTTTTTTGTAAGATTTTTAAAAATTTAGTTACTATAGTTTTTTCTCCTGCTCTTTC
CDS Sequence
- >AT3G21670.1
ATGGTTCATGTGTCATCATCTCATGGAGCCAAAGATGGCTCTGAAGAAGCCTATGATTACAGAGGAAACCCACCAGATAAGTCTAAAACCGGTGGATGGTTAGGCGCCGGTTTAATTTTAGGGAGCGAGCTATCAGAGAGAATATGCGTGATGGGCATATCAATGAATCTAGTGACGTACCTTGTTGGAGATTTACACATCTCATCAGCTAAATCAGCGACCATAGTCACCAACTTCATGGGAACTCTTAACCTTCTAGGGCTTCTCGGTGGTTTTTTGGCTGACGCTAAACTCGGTCGCTACAAGATGGTTGCAATCTCAGCTTCTGTCACAGCTCTGGGAGTGTTGCTTTTGACGGTGGCTACAACTATCTCAAGCATGAGACCACCAATATGTGACGATTTCAGGAGACTTCATCATCAGTGCATAGAAGCAAACGGACACCAGTTGGCTCTTCTCTATGTTGCTCTCTATACCATAGCTCTAGGCGGAGGAGGAATCAAATCCAACGTCTCTGGTTTTGGGTCTGACCAGTTCGATACTAGTGATCCTAAAGAAGAGAAACAGATGATTTTCTTCTTCAACAGATTCTATTTCTCCATCAGCGTCGGCTCTCTCTTCGCCGTGATTGCTCTTGTTTACGTTCAGGACAACGTCGGGAGAGGCTGGGGTTACGGGATCTCTGCCGCGACTATGGTGGTTGCAGCCATTGTTTTACTCTGCGGAACGAAACGGTACCGTTTCAAGAAACCTAAAGGAAGCCCTTTTACAACAATATGGAGGGTTGGTTTCTTGGCTTGGAAGAAAAGAAAGGAGAGTTACCCTGCGCATCCAAGTCTTTTGAACGGTTATGACAACACCACGGTTCCACACACAGAGATGCTTAAGTGTTTAGACAAAGCCGCAATTTCCAAGAACGAGAGCTCTCCTAGCTCGAAGGACTTCGAAGAGAAGGATCCGTGGATCGTTTCGACTGTTACACAAGTCGAAGAAGTGAAACTCGTGATGAAATTGGTACCGATTTGGGCAACGAACATTCTTTTCTGGACGATTTACTCCCAAATGACGACTTTCACGGTCGAACAAGCGACGTTTATGGACCGAAAACTCGGATCTTTCACTGTTCCTGCAGGCTCTTACTCTGCTTTCCTCATACTCACAATTCTCCTCTTCACTTCCCTTAACGAGAGAGTCTTTGTTCCTTTAACAAGAAGGCTCACAAAAAAGCCTCAAGGAATCACAAGCCTACAGAGAATCGGAGTAGGGCTAGTATTCTCAATGGCTGCAATGGCTGTAGCCGCGGTTATAGAGAACGCTAGACGCGAGGCAGCGGTTAACAACGATAAGAAAATAAGCGCGTTTTGGTTGGTTCCACAATATTTCTTAGTCGGTGCGGGTGAGGCCTTTGCTTACGTTGGACAGCTTGAGTTCTTTATAAGAGAAGCACCAGAGAGGATGAAATCGATGAGCACCGGATTGTTTCTAAGCACGATATCGATGGGATTCTTCGTGAGTAGCTTGCTTGTTTCGCTTGTTGATAGGGTTACAGACAAAAGCTGGCTTAGAAGTAACCTTAACAAAGCGAGATTGAACTACTTCTACTGGTTACTTGTTGTCTTGGGAGCATTGAACTTCTTGATTTTTATTGTGTTTGCCATGAAACATCAGTATAAAGCTGATGTGATTACTGTTGTTGTGACTGATGATGATTCAGTGGAGAAGGAAGTGACGAAGAAAGAGAGCTCTGAATTTGAGCTTAAGGACATTCCTTGA
Protein Sequence
- >AT3G21670.1
MVHVSSSHGAKDGSEEAYDYRGNPPDKSKTGGWLGAGLILGSELSERICVMGISMNLVTYLVGDLHISSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYKMVAISASVTALGVLLLTVATTISSMRPPICDDFRRLHHQCIEANGHQLALLYVALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKQMIFFFNRFYFSISVGSLFAVIALVYVQDNVGRGWGYGISAATMVVAAIVLLCGTKRYRFKKPKGSPFTTIWRVGFLAWKKRKESYPAHPSLLNGYDNTTVPHTEMLKCLDKAAISKNESSPSSKDFEEKDPWIVSTVTQVEEVKLVMKLVPIWATNILFWTIYSQMTTFTVEQATFMDRKLGSFTVPAGSYSAFLILTILLFTSLNERVFVPLTRRLTKKPQGITSLQRIGVGLVFSMAAMAVAAVIENARREAAVNNDKKISAFWLVPQYFLVGAGEAFAYVGQLEFFIREAPERMKSMSTGLFLSTISMGFFVSSLLVSLVDRVTDKSWLRSNLNKARLNYFYWLLVVLGALNFLIFIVFAMKHQYKADVITVVVTDDDSVEKEVTKKESSEFELKDIP