Gene Details:
- Gene ID: AT3G21350
- Gene Symbol: MED6
- Gene Name:
- Description: RNA polymerase transcriptional regulation mediator-like protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Germplasm Phenotype:
- CS16504 — No visible phenotype.
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- The transcription corepressor LEUNIG interacts with the histone deacetylase HDA19 and mediator components MED14 (SWP) and CDK8 (HEN3) to repress transcription. DOI: 10.1128/MCB.01912-06 ; PMID: 17526732
- Purification of a plant mediator from Arabidopsis thaliana identifies PFT1 as the Med25 subunit. DOI: 10.1016/j.molcel.2007.05.007 ; PMID: 17560376
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- The mediator complex subunit PFT1 is a key regulator of jasmonate-dependent defense in Arabidopsis. DOI: 10.1105/tpc.109.066910 ; PMID: 19671879
- The Mediator complex in plants: structure, phylogeny, and expression profiling of representative genes in a dicot (Arabidopsis) and a monocot (rice) during reproduction and abiotic stress. DOI: 10.1104/pp.111.188300 ; PMID: 22021418
- The CBP/p300 histone acetyltransferases function as plant-specific MEDIATOR subunits in Arabidopsis. DOI: 10.1111/jipb.13052 ; PMID: 33325122
Sequences:
cDNA Sequence
- >AT3G21350.1
GTGCTCTTCTCCTTCACGGCGAAGTGACTCACTTCCATGGATTCCTCTCTGCTCTCGGCGGCTACGGCCGATACCTTCAACGGCAATGCGGCGGATCAAATTCCTCCTCCGTTACAGCCTCCGGGAACGGATATGACTGGAATTTCCTTCAGGGATCAGCTCTGGATCAATTCATACCCTCTTGATCGTAACTACATCTTCGATTACTTCGCTTTGTCTCCTTTCTACGATACAACTTGCAACAATGAGATTCTTCGGAGAAGATCCATTCACCCTCTCGATCTCTCTCACCTCTCGAAGATGACAGGTCTAGAATATATGTTAACTGATGCTACTGAACCAAACCTGTTCGTCTTTCGTAAGCAAAAGAGAGATGGTCCTGAGAAAGTCACACCGATGCTAACATATTATATCTTGGATGGTTCTATTTACCAAGCTCCTCAGCTTTGTAGTGTCTTCGCAGCTCGAGTTAGTCGGACTATTTATAATATATCCAAGGCTTTCACTGATGCTGCATCGAAATTGGAGACCATTAGACAAGTTGATACTGAAAACCAGAACGAACCTGCTGAGTCGAAGCCTGCTAGTGAGACAGTTGATCTAAAGGAAATGAAGCGAGTCGATGTCATTCTTACCTCATTATATCGCAAGTTAGCGCCACCACCTCCACCCCCACCCTTTCCTGAAGGTTATGTTAGCCAAGAAGCATTAGGAGAAAAGGAAGAGCTTGGAACACAGGGAGGAGAGTCACAACCGCCTCAAGTTGATCCAATTATCGATCAAGGTCCTGCTAAAAGAATGAAGTTCTAAGCTCATCAAAATTGTTTCTTCATCTATGCATGTATAGAATTTTTAGGTACTAGCAAAGGCTCTTCTACTTTTTCGCATTGTTTAATCTGAACTCCTTACACAATTGTTGACATGATTACTTCTCATAAAGTTTCGCATATGAAAGTCATCTCACCGCAACTACCTCAAGGTCAACTAAGCAATAATTGCA - >AT3G21350.2
GTGCTCTTCTCCTTCACGGCGAAGTGACTCACTTCCATGGATTCCTCTCTGCTCTCGGCGGCTACGGCCGATACCTTCAACGGCAATGCGGCGGATCAAATTCCTCCTCCGTTACAGCCTCCGGGAACGGATATGACTGGAATTTCCTTCAGGGATCAGCTCTGGATCAATTCATACCCTCTTGATCGTAACTACATCTTCGATTACTTCGCTTTGTCTCCTTTCTACGATACAACTTGCAACAATGAGATTCTTCGGAGAAGATCCATTCACCCTCTCGATCTCTCTCACCTCTCGAAGATGACAGGTCTAGAATATATGTTAACTGATGCTACTGAACCAAACCTGTTCGTCTTTCGTAAGCAAAAGAGAGATGGTCCTGAGAAAGTCACACCGATGCTAACATATTATATCTTGGATGGTTCTATTTACCAAGCTCCTCAGCTTTGTAGTGTCTTCGCAGCTCGAGTTAGTCGGACTATTTATAATATATCCAAGGCTTTCACTGATGCTGCATCGAAATTGGAGACCATTAGACAAGTTGATACTGAAAACCAGAACGAACCTGCTGAGTCGAAGCCTGCTAGTGAGACAGTTGATCTAAAGGAAATGAAGCGAGTCGATGTCATTCTTACCTCATTATATCGCAAGTTAGCGCCACCACCTCCACCCCCACCCTTTCCTGAAGGTTATGTTAGCCAAGAAGCATTAGGAGAAAAGGAAGAGCTTGGAACACAGGGAGGAGAGTCACAACCGCCTCAAGTTGATCCAATTATCGATCAAGGTCCTGCTAAAAGAATGAAGTTCTAAGCTCATCAAAATTGTTTCTTCATCTATGCATGTATAGAATTTTTAGGTACTAGCAAAGGCTCTTCTACTTTTTCGCATTGTTTAATCTGAACTCCTTACACAATTGTTGACATGATTACTTCTCATAAAGTTTCGCATATGAAAGTCATCTCACCGCAACTACCTCAAGGTCAACTAAGCAATAATTGCA
CDS Sequence
- >AT3G21350.1
ATGGATTCCTCTCTGCTCTCGGCGGCTACGGCCGATACCTTCAACGGCAATGCGGCGGATCAAATTCCTCCTCCGTTACAGCCTCCGGGAACGGATATGACTGGAATTTCCTTCAGGGATCAGCTCTGGATCAATTCATACCCTCTTGATCGTAACTACATCTTCGATTACTTCGCTTTGTCTCCTTTCTACGATACAACTTGCAACAATGAGATTCTTCGGAGAAGATCCATTCACCCTCTCGATCTCTCTCACCTCTCGAAGATGACAGGTCTAGAATATATGTTAACTGATGCTACTGAACCAAACCTGTTCGTCTTTCGTAAGCAAAAGAGAGATGGTCCTGAGAAAGTCACACCGATGCTAACATATTATATCTTGGATGGTTCTATTTACCAAGCTCCTCAGCTTTGTAGTGTCTTCGCAGCTCGAGTTAGTCGGACTATTTATAATATATCCAAGGCTTTCACTGATGCTGCATCGAAATTGGAGACCATTAGACAAGTTGATACTGAAAACCAGAACGAACCTGCTGAGTCGAAGCCTGCTAGTGAGACAGTTGATCTAAAGGAAATGAAGCGAGTCGATGTCATTCTTACCTCATTATATCGCAAGTTAGCGCCACCACCTCCACCCCCACCCTTTCCTGAAGGTTATGTTAGCCAAGAAGCATTAGGAGAAAAGGAAGAGCTTGGAACACAGGGAGGAGAGTCACAACCGCCTCAAGTTGATCCAATTATCGATCAAGGTCCTGCTAAAAGAATGAAGTTCTAA - >AT3G21350.2
ATGGATTCCTCTCTGCTCTCGGCGGCTACGGCCGATACCTTCAACGGCAATGCGGCGGATCAAATTCCTCCTCCGTTACAGCCTCCGGGAACGGATATGACTGGAATTTCCTTCAGGGATCAGCTCTGGATCAATTCATACCCTCTTGATCGTAACTACATCTTCGATTACTTCGCTTTGTCTCCTTTCTACGATACAACTTGCAACAATGAGATTCTTCGGAGAAGATCCATTCACCCTCTCGATCTCTCTCACCTCTCGAAGATGACAGGTCTAGAATATATGTTAACTGATGCTACTGAACCAAACCTGTTCGTCTTTCGTAAGCAAAAGAGAGATGGTCCTGAGAAAGTCACACCGATGCTAACATATTATATCTTGGATGGTTCTATTTACCAAGCTCCTCAGCTTTGTAGTGTCTTCGCAGCTCGAGTTAGTCGGACTATTTATAATATATCCAAGGCTTTCACTGATGCTGCATCGAAATTGGAGACCATTAGACAAGTTGATACTGAAAACCAGAACGAACCTGCTGAGTCGAAGCCTGCTAGTGAGACAGTTGATCTAAAGGAAATGAAGCGAGTCGATGTCATTCTTACCTCATTATATCGCAAGTTAGCGCCACCACCTCCACCCCCACCCTTTCCTGAAGGTTATGTTAGCCAAGAAGCATTAGGAGAAAAGGAAGAGCTTGGAACACAGGGAGGAGAGTCACAACCGCCTCAAGTTGATCCAATTATCGATCAAGGTCCTGCTAAAAGAATGAAGTTCTAA
Protein Sequence
- >AT3G21350.1
MDSSLLSAATADTFNGNAADQIPPPLQPPGTDMTGISFRDQLWINSYPLDRNYIFDYFALSPFYDTTCNNEILRRRSIHPLDLSHLSKMTGLEYMLTDATEPNLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRTIYNISKAFTDAASKLETIRQVDTENQNEPAESKPASETVDLKEMKRVDVILTSLYRKLAPPPPPPPFPEGYVSQEALGEKEELGTQGGESQPPQVDPIIDQGPAKRMKF - >AT3G21350.2
MDSSLLSAATADTFNGNAADQIPPPLQPPGTDMTGISFRDQLWINSYPLDRNYIFDYFALSPFYDTTCNNEILRRRSIHPLDLSHLSKMTGLEYMLTDATEPNLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRTIYNISKAFTDAASKLETIRQVDTENQNEPAESKPASETVDLKEMKRVDVILTSLYRKLAPPPPPPPFPEGYVSQEALGEKEELGTQGGESQPPQVDPIIDQGPAKRMKF