Gene Details:
- Gene ID: AT3G21190
- Gene Symbol: AtMSR1, MSR1
- Gene Name: Mannan Synthesis Related 1
- Description: O-fucosyltransferase family protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure
Literature:
- Localization of organelle proteins by isotope tagging (LOPIT). DOI: 10.1074/mcp.T400009-MCP200 ; PMID: 15295017
- Mapping the Arabidopsis organelle proteome. DOI: 10.1073/pnas.0506958103 ; PMID: 16618929
- The Arabidopsis thaliana transcriptome in response to Agrobacterium tumefaciens. DOI: 10.1094/MPMI-19-0665 ; PMID: 16776300
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptional profiling of mature Arabidopsis trichomes reveals that NOECK encodes the MIXTA-like transcriptional regulator MYB106. DOI: 10.1104/pp.108.126979 ; PMID: 18805951
- Identification of an additional protein involved in mannan biosynthesis. DOI: 10.1111/tpj.12019 ; PMID: 22966747
- Identification of putative rhamnogalacturonan-II specific glycosyltransferases in Arabidopsis using a combination of bioinformatics approaches. DOI: 10.1371/journal.pone.0051129 ; PMID: 23272088
- Label-free protein quantification for plant Golgi protein localization and abundance. DOI: 10.1104/pp.114.245589 ; PMID: 25122472
- A Putative Protein O-Fucosyltransferase Facilitates Pollen Tube Penetration through the Stigma-Style Interface. DOI: 10.1104/pp.17.01577 ; PMID: 29467178
- Mapping the Arabidopsis organelle proteome. DOI: 10.1073/pnas.0506958103 ; PMID: 16618929
Sequences:
cDNA Sequence
- >AT3G21190.1
CTTAAAACAAAAAAAAAAAGAGCTTTTTTGACAAAACATTAATTGAAAGAGAACTGAGATTTCGTATTTGAGGAAGATAGCTTGTCTCTATCTGCCCCACAAACACCTCTCTTTGTTGGACTCTCTTTTTCTTTCTTCTTCCCTTAGTCTATTTTAACTCAGAAACCTCTGTTTTTTTTTGTTAGAGAGAAAGGTAAGAAATGGGTGTTGATTTGAGGCAAGTAGTTGCTGGTATTCTCACCATTACCATGTTTGTGATGCTTGGACAGATGCTTCATAGAGATTACTTTGATTCTCTTCAGGAGAAAGCTCAGGGAGATGCACAAGATATTGAATTTGAAGGATCTAAAGTCTCTGTGAAAGATGGTCTTGTCGGAACCGTTGAAGGCAGTAAAGGACTTTGGATGGAAGATAACACTGATCTTACTCCTTGTTGGCCAACATTACTATCTGATGACGCTGTATCATCGAAAGGGTATGTTACATTCTCACTTACCAATGGTCCTGAGTACCATATCTCTCAGATCACTGATGCTGTAATGGTGGCTAAGCATCTTGGAGCAACTCTAGTACTTCCTGATATAAGAGGAAGCAAACCTGGTGATGAAAGGAATTTTGAAGATATCTATGATGCGGATAAGCTGATTAAAAGCTTGGAAAATGTCGTTAAAGTTGTGAAAAAATTGCCTGAAGAAGTTTCTCTAAGGAACATGGCCATTGTGAAGGTCCCTACCAGAGTTACAGAAGATTACATTAAAGAGCACATTGATCCCATCTTTAAATCTAAAGGAAACATTCGAGTTGCATCATACTTCCCTTCTGTAAACTTGAGAAAATCCTCACAAGATGGCGAAACTGATCCTGTAGCCTGTTTAGCAATGTTTGGGTCTTTGGAGTTGCAACCTGAAGTGAATGCAGTGGCTGAATCAATGGTTGAGCGGTTGAGGACTCATAGCCGTAAATCCGGTGGCCGTTTCATAGCAGTAGACCTTAGAATCGACATACTTGAGAAGAAAAATTGCCATACAACTGGTGTAGTAGGGTCCAAGACATGTTACAACGCTCAAGAGATTGCTTTATTCTTGAGAAAGCTTGGATTTGCCAGCGACACAACTATCTATCTGACTCAGCCAAGATGGGACAGTAGCCTCAATATCCTTAAGGATATCTTCCCAAAAACATTCACTAAGGAGGCAATAATGCCGGCAAGTAAGAGATCAAAGTACCTTGAATCAGTGAGTTCCGAGTACGAAAATGTTATCGACTTCTACATAAGCTCAAGAAGCGATGTCTTTGTTCCAGCCATCTCCGGTCTGTTTTATGCAAACACCGTTGGCAAAAGGATAGCTTTAGGTAAGCCTCAAGTGTTAGTTCCAGCAGAAATCTCAGAGACATCTGGCCTTGCTACAGATTTCATCTCTCCATACATCTCAAAGAAGAACCATTTGGCTTATTCATGCTTTTGCTGACCTTCTCGCATTTCTAAAGTAATCTCCACGCATACTTCCATGGAAGGGCCTTCTCAGTTTTCATCAAGTGTAAGCAATTTAATTATTTTTCTTGTTTTTAATTTGTAAGTTTGTTTCAATATAAGTTGGTTTTTTTGGGCAGTGAGGTTTACAGTTTGAATCTGTTGGCTCATAGCTTTTGCATTCTATAAATTTTGCTCTATAGTAAGAAACACATATATTGTTTGTAAGATTGATTTTAGTGTTGAGGGTTTCTATTGAAGGAAGAACCATGTGAACTATGACAAGATGTGATCATTCTTTTCTCTAAAACCATTGTTAACTCAAATATAGTGATATCACACAGAGAATCCTCCATGTAGATACAACAACACTTTTGTAACCAA
CDS Sequence
- >AT3G21190.1
ATGGGTGTTGATTTGAGGCAAGTAGTTGCTGGTATTCTCACCATTACCATGTTTGTGATGCTTGGACAGATGCTTCATAGAGATTACTTTGATTCTCTTCAGGAGAAAGCTCAGGGAGATGCACAAGATATTGAATTTGAAGGATCTAAAGTCTCTGTGAAAGATGGTCTTGTCGGAACCGTTGAAGGCAGTAAAGGACTTTGGATGGAAGATAACACTGATCTTACTCCTTGTTGGCCAACATTACTATCTGATGACGCTGTATCATCGAAAGGGTATGTTACATTCTCACTTACCAATGGTCCTGAGTACCATATCTCTCAGATCACTGATGCTGTAATGGTGGCTAAGCATCTTGGAGCAACTCTAGTACTTCCTGATATAAGAGGAAGCAAACCTGGTGATGAAAGGAATTTTGAAGATATCTATGATGCGGATAAGCTGATTAAAAGCTTGGAAAATGTCGTTAAAGTTGTGAAAAAATTGCCTGAAGAAGTTTCTCTAAGGAACATGGCCATTGTGAAGGTCCCTACCAGAGTTACAGAAGATTACATTAAAGAGCACATTGATCCCATCTTTAAATCTAAAGGAAACATTCGAGTTGCATCATACTTCCCTTCTGTAAACTTGAGAAAATCCTCACAAGATGGCGAAACTGATCCTGTAGCCTGTTTAGCAATGTTTGGGTCTTTGGAGTTGCAACCTGAAGTGAATGCAGTGGCTGAATCAATGGTTGAGCGGTTGAGGACTCATAGCCGTAAATCCGGTGGCCGTTTCATAGCAGTAGACCTTAGAATCGACATACTTGAGAAGAAAAATTGCCATACAACTGGTGTAGTAGGGTCCAAGACATGTTACAACGCTCAAGAGATTGCTTTATTCTTGAGAAAGCTTGGATTTGCCAGCGACACAACTATCTATCTGACTCAGCCAAGATGGGACAGTAGCCTCAATATCCTTAAGGATATCTTCCCAAAAACATTCACTAAGGAGGCAATAATGCCGGCAAGTAAGAGATCAAAGTACCTTGAATCAGTGAGTTCCGAGTACGAAAATGTTATCGACTTCTACATAAGCTCAAGAAGCGATGTCTTTGTTCCAGCCATCTCCGGTCTGTTTTATGCAAACACCGTTGGCAAAAGGATAGCTTTAGGTAAGCCTCAAGTGTTAGTTCCAGCAGAAATCTCAGAGACATCTGGCCTTGCTACAGATTTCATCTCTCCATACATCTCAAAGAAGAACCATTTGGCTTATTCATGCTTTTGCTGA
Protein Sequence
- >AT3G21190.1
MGVDLRQVVAGILTITMFVMLGQMLHRDYFDSLQEKAQGDAQDIEFEGSKVSVKDGLVGTVEGSKGLWMEDNTDLTPCWPTLLSDDAVSSKGYVTFSLTNGPEYHISQITDAVMVAKHLGATLVLPDIRGSKPGDERNFEDIYDADKLIKSLENVVKVVKKLPEEVSLRNMAIVKVPTRVTEDYIKEHIDPIFKSKGNIRVASYFPSVNLRKSSQDGETDPVACLAMFGSLELQPEVNAVAESMVERLRTHSRKSGGRFIAVDLRIDILEKKNCHTTGVVGSKTCYNAQEIALFLRKLGFASDTTIYLTQPRWDSSLNILKDIFPKTFTKEAIMPASKRSKYLESVSSEYENVIDFYISSRSDVFVPAISGLFYANTVGKRIALGKPQVLVPAEISETSGLATDFISPYISKKNHLAYSCFC